RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 CCDC32Q9BV29 185 aa9.13□□□□□ -0.95
PRKCSH-210ENST00000589990 HINT2Q9BX68 163 aa9.13□□□□□ -0.95
PRKCSH-210ENST00000589990 WDR12Q9GZL7 423 aaKnown RBP9.13□□□□□ -0.95
PRKCSH-210ENST00000589990 NAP1L6A6NFF2 107 aa9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 HPRT1P00492 218 aa9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 TRAPPC2P0DI81 140 aa9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 TRAPPC2BP0DI82 140 aa9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 LPAR6P43657 344 aa9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 SURF2Q15527 256 aaPredicted RBP9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 POU2AF1Q16633 256 aa9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 SRSF8Q9BRL6 282 aaKnown RBP9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 AIFM2Q9BRQ8 373 aa9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 RTBDNQ9BSG5 229 aaPredicted RBP9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 TBC1D24Q9ULP9 559 aa9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 GPR132Q9UNW8 380 aa9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 NSG2Q9Y328 171 aa9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 FAT1Q14517 4588 aa9.12□□□□□ -0.95
PRKCSH-210ENST00000589990 TEX13DA0A0J9YY54 714 aaPredicted RBP9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 DNASE2O00115 360 aaPredicted RBP9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 ST8SIA3O43173 380 aa9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 RBFOX2O43251 390 aaKnown RBP eCLIP9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 CCR6P51684 374 aa9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 TAS2R31P59538 309 aa9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 RND3P61587 244 aa9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 CENPSQ8N2Z9 138 aa9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 DMBX1Q8NFW5 382 aa9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 C7orf50Q9BRJ6 194 aaKnown RBP9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 VSIRQ9H7M9 311 aa9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 NDUFA4L2Q9NRX3 87 aa9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 RABAC1Q9UI14 185 aa9.11□□□□□ -0.95
PRKCSH-210ENST00000589990 MYCBP2O75592 4640 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 C3orf85A0A1B0GTC6 90 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 DBX1A6NMT0 343 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 PLA2G10O15496 165 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 IFNA21P01568 189 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 IFNA17P01571 189 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 NQO2P16083 231 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 AKR1C4P17516 323 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 ERVK-16P61578 105 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 RPL11P62913 178 aaKnown RBP9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 PAFAH1B2P68402 229 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 SP6Q3SY56 376 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 SOHLH1Q5JUK2 328 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 TOMM20LQ6UXN7 152 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 TMED4Q7Z7H5 227 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 ATP6V0BQ99437 205 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 SLC25A21Q9BQT8 299 aaPredicted RBP9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 PLEKHA2Q9HB19 425 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 TMEM14BQ9NUH8 114 aa9.1□□□□□ -0.95
PRKCSH-210ENST00000589990 I3L2K1 104 aa9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 LYRM1O43325 122 aa9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 KRASP01116 189 aa9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 ZNF688P0C7X2 276 aa9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 SPP1P10451 314 aa9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 RELQ04864 619 aaPredicted RBP9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 ACTL10Q5JWF8 245 aa9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 MORN3Q6PF18 240 aaPredicted RBP9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 OR1L8Q8NGR8 309 aa9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 LSM10Q969L4 123 aaKnown RBP9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 TP53RKQ96S44 253 aa9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 NAA60Q9H7X0 242 aa9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 ZFAND3Q9H8U3 227 aa9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 KCNIP3Q9Y2W7 256 aa9.09□□□□□ -0.95
PRKCSH-210ENST00000589990 K7EQG2 157 aa9.08□□□□□ -0.96
PRKCSH-210ENST00000589990 CYB5BO43169 146 aa9.08□□□□□ -0.96
PRKCSH-210ENST00000589990 UPK1BO75841 260 aa9.08□□□□□ -0.96
PRKCSH-210ENST00000589990 G6PCP35575 357 aa9.08□□□□□ -0.96
PRKCSH-210ENST00000589990 EMP1P54849 157 aa9.08□□□□□ -0.96
PRKCSH-210ENST00000589990 TRIM16LQ309B1 348 aa9.08□□□□□ -0.96
PRKCSH-210ENST00000589990 MZT2BQ6NZ67 158 aa9.08□□□□□ -0.96
PRKCSH-210ENST00000589990 STXBP6Q8NFX7 210 aa9.08□□□□□ -0.96
PRKCSH-210ENST00000589990 MISP3Q96FF7 219 aa9.08□□□□□ -0.96
PRKCSH-210ENST00000589990 FAM212BQ9NTI7 297 aaPredicted RBP9.08□□□□□ -0.96
PRKCSH-210ENST00000589990 COMMD9Q9P000 198 aa9.08□□□□□ -0.96
PRKCSH-210ENST00000589990 TRAV2A0A0B4J234 112 aa9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 A0A1B0GU03 582 aa9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 FAM240BA0A1B0GVZ2 78 aa9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 CRYM-AS1A6NIL9 109 aa9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 NDUFB6O95139 128 aa9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 OR5AC1P0C628 307 aa9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 DHODHQ02127 395 aa9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 TMEM41BQ5BJD5 291 aa9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 HSD17B13Q7Z5P4 300 aaPredicted RBP9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 DUSP18Q8NEJ0 188 aa9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 TMEM230Q96A57 120 aa9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 XCL2Q9UBD3 114 aa9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 OR51B2Q9Y5P1 312 aa9.07□□□□□ -0.96
PRKCSH-210ENST00000589990 MARCH11A6NNE9 402 aa9.06□□□□□ -0.96
PRKCSH-210ENST00000589990 B3GALNT1O75752 331 aa9.06□□□□□ -0.96
PRKCSH-210ENST00000589990 SNAPC5O75971 98 aa9.06□□□□□ -0.96
PRKCSH-210ENST00000589990 ATG12O94817 140 aa9.06□□□□□ -0.96
PRKCSH-210ENST00000589990 MT-CO2P00403 227 aa9.06□□□□□ -0.96
PRKCSH-210ENST00000589990 IGKV1-39P01597 117 aa9.06□□□□□ -0.96
PRKCSH-210ENST00000589990 IGKV1D-39P04432 117 aa9.06□□□□□ -0.96
PRKCSH-210ENST00000589990 ANXA3P12429 323 aa9.06□□□□□ -0.96
PRKCSH-210ENST00000589990 UCP1P25874 307 aa9.06□□□□□ -0.96
PRKCSH-210ENST00000589990 BTCP35070 178 aa9.06□□□□□ -0.96
PRKCSH-210ENST00000589990 MFAP4P55083 255 aa9.06□□□□□ -0.96
PRKCSH-210ENST00000589990 IFITM3Q01628 133 aa9.06□□□□□ -0.96
PRKCSH-210ENST00000589990 TMEM128Q5BJH2 165 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms