RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 NUPL2O15504 423 aaKnown RBP11.69□□□□□ -0.54
ATG4D-211ENST00000589753 GGCTO75223 188 aaKnown RBP11.69□□□□□ -0.54
ATG4D-211ENST00000589753 CTSGP08311 255 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 OR10J1P30954 320 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 ZNF616Q08AN1 781 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 OR4F17Q8NGA8 305 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 DPF1Q92782 380 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 DUX3Q96PT4 197 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 OR4F4Q96R69 305 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 CHRDL1Q9BU40 450 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 TMEM147Q9BVK8 224 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 UQCC1Q9NVA1 299 aa11.69□□□□□ -0.54
ATG4D-211ENST00000589753 ZFP92A6NM28 416 aa11.68□□□□□ -0.54
ATG4D-211ENST00000589753 CCL24O00175 119 aa11.68□□□□□ -0.54
ATG4D-211ENST00000589753 PFDN1O60925 122 aa11.68□□□□□ -0.54
ATG4D-211ENST00000589753 IGLC1P0CG04 106 aa11.68□□□□□ -0.54
ATG4D-211ENST00000589753 ADMP35318 185 aa11.68□□□□□ -0.54
ATG4D-211ENST00000589753 AP2S1P53680 142 aaPredicted RBP11.68□□□□□ -0.54
ATG4D-211ENST00000589753 CLINT1Q14677 625 aa11.68□□□□□ -0.54
ATG4D-211ENST00000589753 VWC2Q2TAL6 325 aa11.68□□□□□ -0.54
ATG4D-211ENST00000589753 TMEM144Q7Z5S9 345 aa11.68□□□□□ -0.54
ATG4D-211ENST00000589753 SMIM3Q9BZL3 60 aa11.68□□□□□ -0.54
ATG4D-211ENST00000589753 MFFQ9GZY8 342 aa11.68□□□□□ -0.54
ATG4D-211ENST00000589753 UBE2L5PA0A1B0GUS4 154 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 DFFBO76075 338 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 ZP3P21754 424 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 MYCNOSP40205 109 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 OR2F1Q13607 317 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 FHL3Q13643 280 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 RPEL1Q2QD12 228 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 TIGITQ495A1 244 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 ZFP69Q49AA0 526 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 TREML4Q6UXN2 200 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 THAP8Q8NA92 274 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 HYLS1Q96M11 299 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 ATP5SQ99766 215 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 FBXL17Q9UF56 701 aa11.67□□□□□ -0.54
ATG4D-211ENST00000589753 IGKV1D-37A0A075B6S9 117 aa11.66□□□□□ -0.54
ATG4D-211ENST00000589753 IGKV1OR2-108A0A075B7D4 117 aa11.66□□□□□ -0.54
ATG4D-211ENST00000589753 M0QZ24 198 aa11.66□□□□□ -0.54
ATG4D-211ENST00000589753 OR2C1O95371 312 aa11.66□□□□□ -0.54
ATG4D-211ENST00000589753 IGKV1-17P01599 117 aa11.66□□□□□ -0.54
ATG4D-211ENST00000589753 PF4P02776 101 aa11.66□□□□□ -0.54
ATG4D-211ENST00000589753 HOXD3P31249 432 aaPredicted RBP11.66□□□□□ -0.54
ATG4D-211ENST00000589753 SLURP1P55000 103 aa11.66□□□□□ -0.54
ATG4D-211ENST00000589753 RELQ04864 619 aaPredicted RBP11.66□□□□□ -0.54
ATG4D-211ENST00000589753 ZNF345Q14585 488 aa11.66□□□□□ -0.54
ATG4D-211ENST00000589753 TEPPQ6URK8 271 aa11.66□□□□□ -0.54
ATG4D-211ENST00000589753 TRGV9Q99603 122 aa11.66□□□□□ -0.54
ATG4D-211ENST00000589753 IGHV3-35A0A0C4DH35 117 aa11.65□□□□□ -0.54
ATG4D-211ENST00000589753 EIF2B2P49770 351 aaKnown RBP11.65□□□□□ -0.54
ATG4D-211ENST00000589753 YPEL3P61236 119 aaPredicted RBP11.65□□□□□ -0.54
ATG4D-211ENST00000589753 ZNF600Q6ZNG1 722 aa11.65□□□□□ -0.54
ATG4D-211ENST00000589753 GPHB5Q86YW7 130 aa11.65□□□□□ -0.54
ATG4D-211ENST00000589753 WFDC1Q9HC57 220 aa11.65□□□□□ -0.54
ATG4D-211ENST00000589753 WDR83OSQ9Y284 106 aa11.65□□□□□ -0.54
ATG4D-211ENST00000589753 LSM4Q9Y4Z0 139 aaKnown RBP11.65□□□□□ -0.54
ATG4D-211ENST00000589753 A0A0D9SG52 128 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 NDUFA4O00483 81 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 IFNA5P01569 189 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 FABP1P07148 127 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 CXCL2P19875 107 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 FGF7P21781 194 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 ZNF90Q03938 601 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 RAB31Q13636 194 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 FAM106AQ4KMX7 169 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 BTNL8Q6UX41 500 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 KCNRGQ8N5I3 272 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 SPATA3Q8NHX4 192 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 TENM1Q9UKZ4 2725 aa11.64□□□□□ -0.55
ATG4D-211ENST00000589753 TAAR5O14804 337 aa11.63□□□□□ -0.55
ATG4D-211ENST00000589753 MPDU1O75352 247 aa11.63□□□□□ -0.55
ATG4D-211ENST00000589753 TSPAN15O95858 294 aa11.63□□□□□ -0.55
ATG4D-211ENST00000589753 TOMM40O96008 361 aa11.63□□□□□ -0.55
ATG4D-211ENST00000589753 RD3LP0DJH9 198 aa11.63□□□□□ -0.55
ATG4D-211ENST00000589753 SYNJ2BPP57105 145 aa11.63□□□□□ -0.55
ATG4D-211ENST00000589753 KLF5Q13887 457 aaPredicted RBP11.63□□□□□ -0.55
ATG4D-211ENST00000589753 ZNF266Q14584 549 aa11.63□□□□□ -0.55
ATG4D-211ENST00000589753 CYP2G1PQ6ZSU1 146 aa11.63□□□□□ -0.55
ATG4D-211ENST00000589753 C1QL4Q86Z23 238 aa11.63□□□□□ -0.55
ATG4D-211ENST00000589753 Q8WTZ3 238 aa11.63□□□□□ -0.55
ATG4D-211ENST00000589753 DLX4Q92988 240 aaPredicted RBP11.63□□□□□ -0.55
ATG4D-211ENST00000589753 ZNF414Q96IQ9 312 aa11.63□□□□□ -0.55
ATG4D-211ENST00000589753 MGST2Q99735 147 aa11.63□□□□□ -0.55
ATG4D-211ENST00000589753 WDR61Q9GZS3 305 aaKnown RBP11.63□□□□□ -0.55
ATG4D-211ENST00000589753 PUS1Q9Y606 427 aaKnown RBP eCLIP11.63□□□□□ -0.55
ATG4D-211ENST00000589753 ZNF320A2RRD8 509 aa11.62□□□□□ -0.55
ATG4D-211ENST00000589753 AGPAT2O15120 278 aa11.62□□□□□ -0.55
ATG4D-211ENST00000589753 YIF1AO95070 293 aa11.62□□□□□ -0.55
ATG4D-211ENST00000589753 PSG1P11464 419 aa11.62□□□□□ -0.55
ATG4D-211ENST00000589753 CAMLGP49069 296 aa11.62□□□□□ -0.55
ATG4D-211ENST00000589753 SCGB1C1Q8TD33 95 aa11.62□□□□□ -0.55
ATG4D-211ENST00000589753 ARPC5LQ9BPX5 153 aa11.62□□□□□ -0.55
ATG4D-211ENST00000589753 PARD6GQ9BYG4 376 aaPredicted RBP11.62□□□□□ -0.55
ATG4D-211ENST00000589753 ARL6Q9H0F7 186 aa11.62□□□□□ -0.55
ATG4D-211ENST00000589753 COL6A5A8TX70 2615 aa11.62□□□□□ -0.55
ATG4D-211ENST00000589753 BORCS7-ASMTA0A0B4J1R7 106 aa11.61□□□□□ -0.55
ATG4D-211ENST00000589753 KANTRA0A1W2PQU2 76 aa11.61□□□□□ -0.55
ATG4D-211ENST00000589753 LGALS9O00182 355 aa11.61□□□□□ -0.55
ATG4D-211ENST00000589753 SELENOTP62341 195 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms