RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 DNAH11Q96DT5 4516 aa10.07□□□□□ -0.8
VMP1-209ENST00000588915 PKHD1P08F94 4074 aa10.06□□□□□ -0.8
VMP1-209ENST00000588915 M0QYG6 137 aa10.06□□□□□ -0.8
VMP1-209ENST00000588915 IGLC1P0CG04 106 aa10.06□□□□□ -0.8
VMP1-209ENST00000588915 ELK1P19419 428 aa10.06□□□□□ -0.8
VMP1-209ENST00000588915 LSM3P62310 102 aaKnown RBP10.06□□□□□ -0.8
VMP1-209ENST00000588915 TRIM16LQ309B1 348 aa10.06□□□□□ -0.8
VMP1-209ENST00000588915 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
VMP1-209ENST00000588915 PSMG4Q5JS54 123 aa10.06□□□□□ -0.8
VMP1-209ENST00000588915 TERB2Q8NHR7 220 aa10.06□□□□□ -0.8
VMP1-209ENST00000588915 FAM210BQ96KR6 192 aa10.06□□□□□ -0.8
VMP1-209ENST00000588915 CLEC5AQ9NY25 188 aa10.06□□□□□ -0.8
VMP1-209ENST00000588915 CACFD1Q9UGQ2 172 aa10.06□□□□□ -0.8
VMP1-209ENST00000588915 DYNC1H1Q14204 4646 aaKnown RBP10.06□□□□□ -0.8
VMP1-209ENST00000588915 PCLOQ9Y6V0 5065 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 A0A087WXM4 84 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 TMEM189A5PLL7 270 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 PRSS29PA6NIE9 313 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 GSTZ1O43708 216 aaPredicted RBP10.05□□□□□ -0.8
VMP1-209ENST00000588915 CDS2O95674 445 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 PI3P19957 117 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 C2orf83Q53S99 150 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 ETFRF1Q6IPR1 90 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 PRSS54Q6PEW0 395 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 NOXA1Q86UR1 476 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 C15orf40Q8WUR7 153 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 NRN1Q9NPD7 142 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 KLK11Q9UBX7 282 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 MTFP1Q9UDX5 166 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 CELA1Q9UNI1 258 aa10.05□□□□□ -0.8
VMP1-209ENST00000588915 RYR1P21817 5038 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 A0A0G2JRQ6 117 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 SMIM9A6NGZ8 99 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 FAM90A26D6RGX4 464 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 H3BMM0 161 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 BUB3O43684 328 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 CD3DP04234 171 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 OR10J1P30954 320 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 DHODHQ02127 395 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 SP6Q3SY56 376 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 MZT2AQ6P582 158 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 ZNF705AQ6ZN79 300 aaPredicted RBP10.04□□□□□ -0.8
VMP1-209ENST00000588915 Q6ZRM9 215 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 RNASE11Q8TAA1 199 aaKnown RBP10.04□□□□□ -0.8
VMP1-209ENST00000588915 ABHD1Q96SE0 405 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 TMEM222Q9H0R3 208 aa10.04□□□□□ -0.8
VMP1-209ENST00000588915 HEYLQ9NQ87 328 aaPredicted RBP10.04□□□□□ -0.8
VMP1-209ENST00000588915 TEX48A0A1B0GUV7 120 aa10.03□□□□□ -0.8
VMP1-209ENST00000588915 RTL8CO15255 209 aa10.03□□□□□ -0.8
VMP1-209ENST00000588915 HPGDSO60760 199 aa10.03□□□□□ -0.8
VMP1-209ENST00000588915 SPART-AS1P0CW21 52 aa10.03□□□□□ -0.8
VMP1-209ENST00000588915 HLA-DRB4P13762 266 aa10.03□□□□□ -0.8
VMP1-209ENST00000588915 NKX2-1P43699 371 aaPredicted RBP10.03□□□□□ -0.8
VMP1-209ENST00000588915 RORCP51449 518 aa10.03□□□□□ -0.8
VMP1-209ENST00000588915 RND2P52198 227 aa10.03□□□□□ -0.8
VMP1-209ENST00000588915 SIGLEC15Q6ZMC9 328 aa10.03□□□□□ -0.8
VMP1-209ENST00000588915 CLUHP3Q96NS8 147 aa10.03□□□□□ -0.8
VMP1-209ENST00000588915 PFDN2Q9UHV9 154 aa10.03□□□□□ -0.8
VMP1-209ENST00000588915 HLA-DRB4X5D2U9 266 aa10.03□□□□□ -0.8
VMP1-209ENST00000588915 ZNF705FA8MVS1 300 aaPredicted RBP10.02□□□□□ -0.81
VMP1-209ENST00000588915 TOMM40O96008 361 aa10.02□□□□□ -0.81
VMP1-209ENST00000588915 CD74P04233 296 aa10.02□□□□□ -0.81
VMP1-209ENST00000588915 IL4P05112 153 aa10.02□□□□□ -0.81
VMP1-209ENST00000588915 ZNF705DP0CH99 300 aaPredicted RBP10.02□□□□□ -0.81
VMP1-209ENST00000588915 ZNF705BP0CI00 300 aaPredicted RBP10.02□□□□□ -0.81
VMP1-209ENST00000588915 RD3LP0DJH9 198 aa10.02□□□□□ -0.81
VMP1-209ENST00000588915 NUP62P37198 522 aaPredicted RBP10.02□□□□□ -0.81
VMP1-209ENST00000588915 TMEM229BQ8NBD8 167 aa10.02□□□□□ -0.81
VMP1-209ENST00000588915 SLC24A4Q8NFF2 622 aa10.02□□□□□ -0.81
VMP1-209ENST00000588915 OR13C8Q8NGS7 320 aa10.02□□□□□ -0.81
VMP1-209ENST00000588915 OR52I2Q8NH67 350 aa10.02□□□□□ -0.81
VMP1-209ENST00000588915 GLYATL2Q8WU03 294 aa10.02□□□□□ -0.81
VMP1-209ENST00000588915 RBPMSQ93062 196 aaKnown RBP10.02□□□□□ -0.81
VMP1-209ENST00000588915 XCL2Q9UBD3 114 aa10.02□□□□□ -0.81
VMP1-209ENST00000588915 PKD1P98161 4303 aa10.02□□□□□ -0.81
VMP1-209ENST00000588915 TEX13DA0A0J9YY54 714 aaPredicted RBP10.01□□□□□ -0.81
VMP1-209ENST00000588915 FAM25AB3EWG3 89 aa10.01□□□□□ -0.81
VMP1-209ENST00000588915 FAM25CB3EWG5 89 aa10.01□□□□□ -0.81
VMP1-209ENST00000588915 FAM25GB3EWG6 89 aa10.01□□□□□ -0.81
VMP1-209ENST00000588915 IFNA10P01566 189 aa10.01□□□□□ -0.81
VMP1-209ENST00000588915 IFNA21P01568 189 aa10.01□□□□□ -0.81
VMP1-209ENST00000588915 TAS2R19P59542 299 aa10.01□□□□□ -0.81
VMP1-209ENST00000588915 NCS1P62166 190 aa10.01□□□□□ -0.81
VMP1-209ENST00000588915 SSBP1Q04837 148 aaKnown RBP10.01□□□□□ -0.81
VMP1-209ENST00000588915 USF2Q15853 346 aaPredicted RBP10.01□□□□□ -0.81
VMP1-209ENST00000588915 ZNF767PQ75MW2 155 aa10.01□□□□□ -0.81
VMP1-209ENST00000588915 AP3S1Q92572 193 aa10.01□□□□□ -0.81
VMP1-209ENST00000588915 MUC4Q99102 2169 aa10□□□□□ -0.81
VMP1-209ENST00000588915 CEBPZOSA8MTT3 80 aa10□□□□□ -0.81
VMP1-209ENST00000588915 TNFAIP8O95379 198 aa10□□□□□ -0.81
VMP1-209ENST00000588915 RAB3DO95716 219 aa10□□□□□ -0.81
VMP1-209ENST00000588915 OR5AC1P0C628 307 aa10□□□□□ -0.81
VMP1-209ENST00000588915 VBP1P61758 197 aa10□□□□□ -0.81
VMP1-209ENST00000588915 OXA1LQ15070 435 aa10□□□□□ -0.81
VMP1-209ENST00000588915 SURF2Q15527 256 aaPredicted RBP10□□□□□ -0.81
VMP1-209ENST00000588915 RNF212Q495C1 297 aa10□□□□□ -0.81
VMP1-209ENST00000588915 SPATA31B1PQ5VZV4 182 aa10□□□□□ -0.81
VMP1-209ENST00000588915 SELENOHQ8IZQ5 122 aaKnown RBP10□□□□□ -0.81
VMP1-209ENST00000588915 MARCH1Q8TCQ1 289 aa10□□□□□ -0.81
VMP1-209ENST00000588915 NPIPB3Q92617 1050 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms