RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ZNF705AQ6ZN79 300 aaPredicted RBP13.18□□□□□ -0.3
CCDC43-204ENST00000588687 OR4D10Q8NGI6 311 aa13.18□□□□□ -0.3
CCDC43-204ENST00000588687 LHFPL5Q8TAF8 219 aa13.18□□□□□ -0.3
CCDC43-204ENST00000588687 NARS2Q96I59 477 aaKnown RBP13.18□□□□□ -0.3
CCDC43-204ENST00000588687 TRAV30A0A087WSZ9 112 aa13.17□□□□□ -0.3
CCDC43-204ENST00000588687 SMIM31A0A1B0GVY4 71 aa13.17□□□□□ -0.3
CCDC43-204ENST00000588687 ZNF705FA8MVS1 300 aaPredicted RBP13.17□□□□□ -0.3
CCDC43-204ENST00000588687 NXPH3O95157 252 aa13.17□□□□□ -0.3
CCDC43-204ENST00000588687 ZNF705DP0CH99 300 aaPredicted RBP13.17□□□□□ -0.3
CCDC43-204ENST00000588687 ZNF705BP0CI00 300 aaPredicted RBP13.17□□□□□ -0.3
CCDC43-204ENST00000588687 RND2P52198 227 aa13.17□□□□□ -0.3
CCDC43-204ENST00000588687 YPEL3P61236 119 aaPredicted RBP13.17□□□□□ -0.3
CCDC43-204ENST00000588687 TRIM16LQ309B1 348 aa13.17□□□□□ -0.3
CCDC43-204ENST00000588687 RNASE12Q5GAN4 147 aaKnown RBP13.17□□□□□ -0.3
CCDC43-204ENST00000588687 RNASE10Q5GAN6 216 aaKnown RBP13.17□□□□□ -0.3
CCDC43-204ENST00000588687 OR1S2Q8NGQ3 325 aa13.17□□□□□ -0.3
CCDC43-204ENST00000588687 OR13C8Q8NGS7 320 aa13.17□□□□□ -0.3
CCDC43-204ENST00000588687 OR52E5Q8NH55 327 aa13.17□□□□□ -0.3
CCDC43-204ENST00000588687 NDUFAF3Q9BU61 184 aa13.17□□□□□ -0.3
CCDC43-204ENST00000588687 SEPSECSQ9HD40 501 aaKnown RBP13.17□□□□□ -0.3
CCDC43-204ENST00000588687 XCL2Q9UBD3 114 aa13.17□□□□□ -0.3
CCDC43-204ENST00000588687 SCGB2A1O75556 95 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 ATG12O94817 140 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 HLA-DRB4P13762 266 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 TBPP20226 339 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 OR10J1P30954 320 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 HTR2BP41595 481 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 EIF2B2P49770 351 aaKnown RBP13.16□□□□□ -0.3
CCDC43-204ENST00000588687 SPCS3P61009 180 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 DHODHQ02127 395 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 LGALS9BQ3B8N2 356 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 C2orf83Q53S99 150 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 Q6ZR54 194 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 OR52I2Q8NH67 350 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 NEU1Q99519 415 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 C1QTNF4Q9BXJ3 329 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 ENY2Q9NPA8 101 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 NRN1Q9NPD7 142 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 HLA-DRB4X5D2U9 266 aa13.16□□□□□ -0.3
CCDC43-204ENST00000588687 RPS10-NUDT3A0A1W2PQS6 291 aa13.15□□□□□ -0.3
CCDC43-204ENST00000588687 M0R2N4 97 aa13.15□□□□□ -0.3
CCDC43-204ENST00000588687 BUB3O43684 328 aa13.15□□□□□ -0.3
CCDC43-204ENST00000588687 CDS2O95674 445 aa13.15□□□□□ -0.3
CCDC43-204ENST00000588687 AP2S1P53680 142 aaPredicted RBP13.15□□□□□ -0.3
CCDC43-204ENST00000588687 CENPSQ8N2Z9 138 aa13.15□□□□□ -0.3
CCDC43-204ENST00000588687 RNASEH2CQ8TDP1 164 aaKnown RBP13.15□□□□□ -0.3
CCDC43-204ENST00000588687 RRNAD1Q96FB5 475 aaKnown RBP13.15□□□□□ -0.3
CCDC43-204ENST00000588687 TMEM222Q9H0R3 208 aa13.15□□□□□ -0.3
CCDC43-204ENST00000588687 MTFP1Q9UDX5 166 aa13.15□□□□□ -0.3
CCDC43-204ENST00000588687 NACAE9PAV3 2078 aa13.15□□□□□ -0.3
CCDC43-204ENST00000588687 APOBP04114 4563 aaKnown RBP13.14□□□□□ -0.31
CCDC43-204ENST00000588687 IL4P05112 153 aa13.14□□□□□ -0.31
CCDC43-204ENST00000588687 SLC25A4P12235 298 aa13.14□□□□□ -0.31
CCDC43-204ENST00000588687 VBP1P61758 197 aa13.14□□□□□ -0.31
CCDC43-204ENST00000588687 GDF5OSQ5U4N7 250 aa13.14□□□□□ -0.31
CCDC43-204ENST00000588687 FAM219AQ8IW50 185 aa13.14□□□□□ -0.31
CCDC43-204ENST00000588687 SLC24A4Q8NFF2 622 aa13.14□□□□□ -0.31
CCDC43-204ENST00000588687 Q8WTZ3 238 aa13.14□□□□□ -0.31
CCDC43-204ENST00000588687 GLYATL2Q8WU03 294 aa13.14□□□□□ -0.31
CCDC43-204ENST00000588687 FUNDC2Q9BWH2 189 aa13.14□□□□□ -0.31
CCDC43-204ENST00000588687 COPZ2Q9P299 210 aa13.14□□□□□ -0.31
CCDC43-204ENST00000588687 B3GALNT1O75752 331 aa13.13□□□□□ -0.31
CCDC43-204ENST00000588687 OR5AC1P0C628 307 aa13.13□□□□□ -0.31
CCDC43-204ENST00000588687 DEFB1P60022 68 aa13.13□□□□□ -0.31
CCDC43-204ENST00000588687 NUTF2P61970 127 aaKnown RBP13.13□□□□□ -0.31
CCDC43-204ENST00000588687 SNRPD3P62318 126 aaKnown RBP13.13□□□□□ -0.31
CCDC43-204ENST00000588687 SIGLEC15Q6ZMC9 328 aa13.13□□□□□ -0.31
CCDC43-204ENST00000588687 ZNF709Q8N972 641 aa13.13□□□□□ -0.31
CCDC43-204ENST00000588687 CCDC71LQ8N9Z2 235 aa13.13□□□□□ -0.31
CCDC43-204ENST00000588687 TERB2Q8NHR7 220 aa13.13□□□□□ -0.31
CCDC43-204ENST00000588687 MARCH1Q8TCQ1 289 aa13.13□□□□□ -0.31
CCDC43-204ENST00000588687 ABHD1Q96SE0 405 aa13.13□□□□□ -0.31
CCDC43-204ENST00000588687 KRTAP4-5Q9BYR2 181 aa13.13□□□□□ -0.31
CCDC43-204ENST00000588687 TOMM40O96008 361 aa13.12□□□□□ -0.31
CCDC43-204ENST00000588687 NKX2-1P43699 371 aaPredicted RBP13.12□□□□□ -0.31
CCDC43-204ENST00000588687 ZFAND1Q8TCF1 268 aa13.12□□□□□ -0.31
CCDC43-204ENST00000588687 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.12□□□□□ -0.31
CCDC43-204ENST00000588687 CACNG5Q9UF02 275 aa13.12□□□□□ -0.31
CCDC43-204ENST00000588687 A0A087WXM4 84 aa13.11□□□□□ -0.31
CCDC43-204ENST00000588687 RNASE11Q8TAA1 199 aaKnown RBP13.11□□□□□ -0.31
CCDC43-204ENST00000588687 NPIPB3Q92617 1050 aa13.11□□□□□ -0.31
CCDC43-204ENST00000588687 RBPMSQ93062 196 aaKnown RBP13.11□□□□□ -0.31
CCDC43-204ENST00000588687 GPR146Q96CH1 333 aa13.11□□□□□ -0.31
CCDC43-204ENST00000588687 RTBDNQ9BSG5 229 aaPredicted RBP13.11□□□□□ -0.31
CCDC43-204ENST00000588687 HEYLQ9NQ87 328 aaPredicted RBP13.11□□□□□ -0.31
CCDC43-204ENST00000588687 SOCS3O14543 225 aa13.1□□□□□ -0.31
CCDC43-204ENST00000588687 SPART-AS1P0CW21 52 aa13.1□□□□□ -0.31
CCDC43-204ENST00000588687 NPY1RP25929 384 aa13.1□□□□□ -0.31
CCDC43-204ENST00000588687 NMSQ5H8A3 153 aa13.1□□□□□ -0.31
CCDC43-204ENST00000588687 SELENOHQ8IZQ5 122 aaKnown RBP13.1□□□□□ -0.31
CCDC43-204ENST00000588687 TMEM229BQ8NBD8 167 aa13.1□□□□□ -0.31
CCDC43-204ENST00000588687 FAM210BQ96KR6 192 aa13.1□□□□□ -0.31
CCDC43-204ENST00000588687 WDR12Q9GZL7 423 aaKnown RBP13.1□□□□□ -0.31
CCDC43-204ENST00000588687 NAA60Q9H7X0 242 aa13.1□□□□□ -0.31
CCDC43-204ENST00000588687 DKK2Q9UBU2 259 aa13.1□□□□□ -0.31
CCDC43-204ENST00000588687 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
CCDC43-204ENST00000588687 GSTZ1O43708 216 aaPredicted RBP13.09□□□□□ -0.31
CCDC43-204ENST00000588687 RD3LP0DJH9 198 aa13.09□□□□□ -0.31
CCDC43-204ENST00000588687 PSG1P11464 419 aa13.09□□□□□ -0.31
CCDC43-204ENST00000588687 MEF2DQ14814 521 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms