RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 SPARTQ8N0X7 666 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 TMEM256Q8N2U0 113 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 ATP6V0E2Q8NHE4 81 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 TRIM63Q969Q1 353 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 MUL1Q969V5 352 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 DPH3Q96FX2 82 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 PYURFQ96I23 114 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 FUNDC2Q9BWH2 189 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 QTRT1Q9BXR0 403 aaKnown RBP4.27□□□□□ -1.73
TPM4-210ENST00000588507 COMMD5Q9GZQ3 224 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 CCDC90BQ9GZT6 254 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 CDIP1Q9H305 208 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 BANF2Q9H503 90 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 MRPS7Q9Y2R9 242 aaKnown RBP4.27□□□□□ -1.73
TPM4-210ENST00000588507 PRELID3BQ9Y3B1 194 aa4.27□□□□□ -1.73
TPM4-210ENST00000588507 A0A0J9YX75 114 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 LOC100130705A0A1B0GUX0 176 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 A8MTW9 85 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 M0R2Z0 102 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 RGS10O43665 173 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 PRAF2O60831 178 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 PTTG1O95997 202 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 GNAO1P09471 354 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 SRIP30626 198 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 ID1P41134 155 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 CLDN12P56749 244 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 NANOS3P60323 173 aaKnown RBP4.26□□□□□ -1.73
TPM4-210ENST00000588507 SPINK13Q1W4C9 94 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 TIMM50Q3ZCQ8 353 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 TP53I3Q53FA7 332 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 OR2B11Q5JQS5 317 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 OR2G6Q5TZ20 316 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 THOC7Q6I9Y2 204 aaKnown RBP4.26□□□□□ -1.73
TPM4-210ENST00000588507 BAP18Q8IXM2 172 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 CCDC71LQ8N9Z2 235 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 BPIFB6Q8NFQ5 453 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 COQ8AQ8NI60 647 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 NIPSNAP1Q9BPW8 284 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 FAAP24Q9BTP7 215 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 TEX12Q9BXU0 123 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 PSORS1C1Q9UIG5 152 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 RBM7Q9Y580 266 aaKnown RBP4.26□□□□□ -1.73
TPM4-210ENST00000588507 COX11Q9Y6N1 276 aa4.26□□□□□ -1.73
TPM4-210ENST00000588507 TRGV2A0A075B6R0 118 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 TRAV8-3A0A0A6YYJ7 113 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 IGKV1-6A0A0C4DH72 117 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 FAM25AB3EWG3 89 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 FAM25CB3EWG5 89 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 FAM25GB3EWG6 89 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 PTGES3LE9PB15 166 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 I3L2K1 104 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 GABARAPO95166 117 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 BPNT1O95861 308 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 HRASP01112 189 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 IGHV3-48P01763 117 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 IGHV3-30P01768 117 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 IGHV3-33P01772 117 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 HTR1AP08908 422 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 OR2T7P0C7T2 308 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 TRAPPC2P0DI81 140 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 TRAPPC2BP0DI82 140 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 IGHV3-30-3P0DP02 117 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 IGHV3-30-5P0DP03 117 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 NAT1P18440 290 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 CELP19835 753 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 CDK5Q00535 292 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 SSX1Q16384 188 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 ZIK1Q3SY52 487 aaPredicted RBP4.25□□□□□ -1.73
TPM4-210ENST00000588507 SPANXN2Q5MJ10 180 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 XAF1Q6GPH4 301 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 SFXN4Q6P4A7 337 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 OR4S2Q8NH73 311 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 RHOXF1Q8NHV9 184 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 MCFD2Q8NI22 146 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 CHAC2Q8WUX2 184 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 BLNKQ8WV28 456 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 ZC2HC1AQ96GY0 325 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 PDCD1LG2Q9BQ51 273 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 GABARAPL1Q9H0R8 117 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 HRASLSQ9HDD0 168 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 DIABLOQ9NR28 239 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 BET1LQ9NYM9 111 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 TAS2R4Q9NYW5 299 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 DOK5Q9P104 306 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 PRO0255Q9UI72 69 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 BOLA1Q9Y3E2 137 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 U3KQE9 123 aa4.25□□□□□ -1.73
TPM4-210ENST00000588507 A0A087WYN8 130 aa4.24□□□□□ -1.73
TPM4-210ENST00000588507 TRBV6-6A0A0A6YYG2 114 aa4.24□□□□□ -1.73
TPM4-210ENST00000588507 TRAV8-1A0A0A6YYK1 113 aa4.24□□□□□ -1.73
TPM4-210ENST00000588507 TEX13DA0A0J9YY54 714 aaPredicted RBP4.24□□□□□ -1.73
TPM4-210ENST00000588507 OR4C45A6NMZ5 311 aa4.24□□□□□ -1.73
TPM4-210ENST00000588507 SNURFLB1AK76 121 aa4.24□□□□□ -1.73
TPM4-210ENST00000588507 UPK1BO75841 260 aa4.24□□□□□ -1.73
TPM4-210ENST00000588507 MT-CO2P00403 227 aa4.24□□□□□ -1.73
TPM4-210ENST00000588507 CD36P16671 472 aa4.24□□□□□ -1.73
TPM4-210ENST00000588507 PSMB9P28065 219 aa4.24□□□□□ -1.73
TPM4-210ENST00000588507 NPBWR1P48145 328 aa4.24□□□□□ -1.73
TPM4-210ENST00000588507 TAS2R43P59537 309 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms