RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 OR51S1Q8NGJ8 323 aa10.47□□□□□ -0.73
VMP1-206ENST00000587945 C11orf45Q8TAV5 145 aa10.47□□□□□ -0.73
VMP1-206ENST00000587945 DNAH10Q8IVF4 4471 aa10.46□□□□□ -0.73
VMP1-206ENST00000587945 CTDSPLO15194 276 aa10.46□□□□□ -0.73
VMP1-206ENST00000587945 SCGB2A1O75556 95 aa10.46□□□□□ -0.73
VMP1-206ENST00000587945 GIG44P09565 113 aaPredicted RBP10.46□□□□□ -0.73
VMP1-206ENST00000587945 C2orf83Q53S99 150 aa10.46□□□□□ -0.73
VMP1-206ENST00000587945 RPP25LQ8N5L8 163 aaKnown RBP10.46□□□□□ -0.73
VMP1-206ENST00000587945 SLC24A4Q8NFF2 622 aa10.46□□□□□ -0.73
VMP1-206ENST00000587945 OR1S2Q8NGQ3 325 aa10.46□□□□□ -0.73
VMP1-206ENST00000587945 DYNC2LI1Q8TCX1 351 aa10.46□□□□□ -0.73
VMP1-206ENST00000587945 C11orf68Q9H3H3 251 aaKnown RBP10.46□□□□□ -0.73
VMP1-206ENST00000587945 TMEM56-RWDD3S4R434 201 aa10.46□□□□□ -0.73
VMP1-206ENST00000587945 TRAV30A0A087WSZ9 112 aa10.45□□□□□ -0.74
VMP1-206ENST00000587945 DEDDO75618 318 aa10.45□□□□□ -0.74
VMP1-206ENST00000587945 OR10J1P30954 320 aa10.45□□□□□ -0.74
VMP1-206ENST00000587945 TRPT1Q86TN4 253 aaKnown RBP10.45□□□□□ -0.74
VMP1-206ENST00000587945 RNASEH2CQ8TDP1 164 aaKnown RBP10.45□□□□□ -0.74
VMP1-206ENST00000587945 DCANP1Q8TF63 244 aa10.45□□□□□ -0.74
VMP1-206ENST00000587945 Q8WTZ3 238 aa10.45□□□□□ -0.74
VMP1-206ENST00000587945 NARS2Q96I59 477 aaKnown RBP10.45□□□□□ -0.74
VMP1-206ENST00000587945 PRRT1Q99946 306 aa10.45□□□□□ -0.74
VMP1-206ENST00000587945 CCDC59Q9P031 241 aaKnown RBP10.45□□□□□ -0.74
VMP1-206ENST00000587945 U3KQE9 123 aa10.45□□□□□ -0.74
VMP1-206ENST00000587945 VPS13DQ5THJ4 4388 aa10.44□□□□□ -0.74
VMP1-206ENST00000587945 ANKRD20A5PA0PJZ0 165 aa10.44□□□□□ -0.74
VMP1-206ENST00000587945 SLC25A4P12235 298 aa10.44□□□□□ -0.74
VMP1-206ENST00000587945 C4BPBP20851 252 aa10.44□□□□□ -0.74
VMP1-206ENST00000587945 NPY1RP25929 384 aa10.44□□□□□ -0.74
VMP1-206ENST00000587945 USF2Q15853 346 aaPredicted RBP10.44□□□□□ -0.74
VMP1-206ENST00000587945 ACTL10Q5JWF8 245 aa10.44□□□□□ -0.74
VMP1-206ENST00000587945 RAB2BQ8WUD1 216 aa10.44□□□□□ -0.74
VMP1-206ENST00000587945 NPIPB3Q92617 1050 aa10.44□□□□□ -0.74
VMP1-206ENST00000587945 ACY3Q96HD9 319 aa10.44□□□□□ -0.74
VMP1-206ENST00000587945 GRAMD2BQ96HH9 432 aa10.44□□□□□ -0.74
VMP1-206ENST00000587945 MFFQ9GZY8 342 aa10.44□□□□□ -0.74
VMP1-206ENST00000587945 FRAS1Q86XX4 4008 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 GSTZ1O43708 216 aaPredicted RBP10.43□□□□□ -0.74
VMP1-206ENST00000587945 IFNA4P05014 189 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 IL4P05112 153 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 HNRNPCP07910 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
VMP1-206ENST00000587945 SULT1A3P0DMM9 295 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 SULT1A4P0DMN0 295 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 YPEL3P61236 119 aaPredicted RBP10.43□□□□□ -0.74
VMP1-206ENST00000587945 DHRS2Q13268 280 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 NMSQ5H8A3 153 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 C16orf54Q6UWD8 224 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 LYZL2Q7Z4W2 148 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 Q8NAQ8 132 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 GLMPQ8WWB7 406 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 MCUBQ9NWR8 336 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 CLEC5AQ9NY25 188 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 KCNIP3Q9Y2W7 256 aa10.43□□□□□ -0.74
VMP1-206ENST00000587945 IGHV4-28A0A0C4DH34 117 aa10.42□□□□□ -0.74
VMP1-206ENST00000587945 IFNA10P01566 189 aa10.42□□□□□ -0.74
VMP1-206ENST00000587945 RBMY1A1P0DJD3 496 aaKnown RBP10.42□□□□□ -0.74
VMP1-206ENST00000587945 RBMY1CP0DJD4 496 aa10.42□□□□□ -0.74
VMP1-206ENST00000587945 AKR1C4P17516 323 aa10.42□□□□□ -0.74
VMP1-206ENST00000587945 SUPT4H1P63272 117 aaKnown RBP10.42□□□□□ -0.74
VMP1-206ENST00000587945 RBMY1FQ15415 496 aaKnown RBP10.42□□□□□ -0.74
VMP1-206ENST00000587945 PSMG4Q5JS54 123 aa10.42□□□□□ -0.74
VMP1-206ENST00000587945 IL22RA2Q969J5 263 aa10.42□□□□□ -0.74
VMP1-206ENST00000587945 SOSTQ9BQB4 213 aa10.42□□□□□ -0.74
VMP1-206ENST00000587945 SCP2D1Q9UJQ7 156 aa10.42□□□□□ -0.74
VMP1-206ENST00000587945 HELTA6NFD8 242 aa10.41□□□□□ -0.74
VMP1-206ENST00000587945 RD3LP0DJH9 198 aa10.41□□□□□ -0.74
VMP1-206ENST00000587945 SPP1P10451 314 aa10.41□□□□□ -0.74
VMP1-206ENST00000587945 TNFSF8P32971 234 aa10.41□□□□□ -0.74
VMP1-206ENST00000587945 TMBIM6P55061 237 aa10.41□□□□□ -0.74
VMP1-206ENST00000587945 LGALS9CQ6DKI2 356 aa10.41□□□□□ -0.74
VMP1-206ENST00000587945 ETFRF1Q6IPR1 90 aa10.41□□□□□ -0.74
VMP1-206ENST00000587945 MORN3Q6PF18 240 aaPredicted RBP10.41□□□□□ -0.74
VMP1-206ENST00000587945 RAB40CQ96S21 281 aa10.41□□□□□ -0.74
VMP1-206ENST00000587945 SLIRPQ9GZT3 109 aaKnown RBP10.41□□□□□ -0.74
VMP1-206ENST00000587945 RBKSQ9H477 322 aa10.41□□□□□ -0.74
VMP1-206ENST00000587945 RABL2AQ9UBK7 228 aaPredicted RBP10.41□□□□□ -0.74
VMP1-206ENST00000587945 RSL24D1Q9UHA3 163 aaKnown RBP10.41□□□□□ -0.74
VMP1-206ENST00000587945 RABL2BQ9UNT1 228 aa10.41□□□□□ -0.74
VMP1-206ENST00000587945 FABP12A6NFH5 140 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 TOMM40O96008 361 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 PSG1P11464 419 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 EIF2B2P49770 351 aaKnown RBP10.4□□□□□ -0.74
VMP1-206ENST00000587945 CCR6P51684 374 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 SMCO1Q147U7 214 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 NOXA1Q86UR1 476 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 LGI3Q8N145 548 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 OR51G1Q8NGK1 321 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 DTD1Q8TEA8 209 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 C2CD4CQ8TF44 421 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 SCGB3A2Q96PL1 93 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 HSPB7Q9UBY9 170 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 X6R8D5 127 aa10.4□□□□□ -0.74
VMP1-206ENST00000587945 A0A0B4J2A0 478 aa10.39□□□□□ -0.75
VMP1-206ENST00000587945 ZNF705EA8MWA4 302 aaPredicted RBP10.39□□□□□ -0.75
VMP1-206ENST00000587945 IGLL5B9A064 214 aa10.39□□□□□ -0.75
VMP1-206ENST00000587945 FAM90A26D6RGX4 464 aa10.39□□□□□ -0.75
VMP1-206ENST00000587945 H3BMQ9 156 aa10.39□□□□□ -0.75
VMP1-206ENST00000587945 BUB3O43684 328 aa10.39□□□□□ -0.75
VMP1-206ENST00000587945 AP2S1P53680 142 aaPredicted RBP10.39□□□□□ -0.75
VMP1-206ENST00000587945 PRR20EP86478 221 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms