RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 BAP18Q8IXM2 172 aa8.02□□□□□ -1.13
ZNF540-205ENST00000587220 SVBPQ8N300 66 aa8.02□□□□□ -1.13
ZNF540-205ENST00000587220 UBAC2Q8NBM4 344 aa8.02□□□□□ -1.13
ZNF540-205ENST00000587220 CLRN3Q8NCR9 226 aa8.02□□□□□ -1.13
ZNF540-205ENST00000587220 OR1L6Q8NGR2 347 aa8.02□□□□□ -1.13
ZNF540-205ENST00000587220 BSCL2Q96G97 398 aaPredicted RBP8.02□□□□□ -1.13
ZNF540-205ENST00000587220 FAM110AQ9BQ89 295 aa8.02□□□□□ -1.13
ZNF540-205ENST00000587220 HIPK2Q9H2X6 1198 aa8.02□□□□□ -1.13
ZNF540-205ENST00000587220 MRPL27Q9P0M9 148 aaKnown RBP8.02□□□□□ -1.13
ZNF540-205ENST00000587220 MBD2Q9UBB5 411 aa8.02□□□□□ -1.13
ZNF540-205ENST00000587220 CARHSP1Q9Y2V2 147 aaKnown RBP8.02□□□□□ -1.13
ZNF540-205ENST00000587220 RBMY1BA6NDE4 496 aaKnown RBP8.01□□□□□ -1.13
ZNF540-205ENST00000587220 C5orf51A6NDU8 294 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 RBMY1EA6NEQ0 496 aaKnown RBP8.01□□□□□ -1.13
ZNF540-205ENST00000587220 ATG12O94817 140 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 RBMY1DP0C7P1 496 aaKnown RBP8.01□□□□□ -1.13
ZNF540-205ENST00000587220 ATF4P18848 351 aaPredicted RBP8.01□□□□□ -1.13
ZNF540-205ENST00000587220 VAMP1P23763 118 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 ELLP55199 621 aaPredicted RBP8.01□□□□□ -1.13
ZNF540-205ENST00000587220 FLI1Q01543 452 aaPredicted RBP8.01□□□□□ -1.13
ZNF540-205ENST00000587220 IL15RAQ13261 267 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 Q56UQ5 140 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 SPSB3Q6PJ21 355 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 H2BFWTQ7Z2G1 175 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 TBC1D26Q86UD7 250 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 OR5B3Q8NH48 314 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 OR4A16Q8NH70 328 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 IL17DQ8TAD2 202 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 C2orf50Q96LR7 162 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 C20orf24Q9BUV8 137 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 NKX6-2Q9C056 277 aaPredicted RBP8.01□□□□□ -1.13
ZNF540-205ENST00000587220 NDUFA4L2Q9NRX3 87 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 C21orf62Q9NYP8 219 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 PRELID1Q9Y255 219 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 F11RQ9Y624 299 aaKnown RBP8.01□□□□□ -1.13
ZNF540-205ENST00000587220 TENM2Q9NT68 2774 aa8.01□□□□□ -1.13
ZNF540-205ENST00000587220 IGHV3-21A0A0B4J1V1 117 aa8□□□□□ -1.13
ZNF540-205ENST00000587220 TRAV25A0A0B4J276 109 aa8□□□□□ -1.13
ZNF540-205ENST00000587220 TMEM218A2RU14 115 aa8□□□□□ -1.13
ZNF540-205ENST00000587220 C15orf61A6NNL5 157 aa8□□□□□ -1.13
ZNF540-205ENST00000587220 DNASE2O00115 360 aaPredicted RBP8□□□□□ -1.13
ZNF540-205ENST00000587220 TSPAN4O14817 238 aa8□□□□□ -1.13
ZNF540-205ENST00000587220 AKR1C4P17516 323 aa8□□□□□ -1.13
ZNF540-205ENST00000587220 LINC00322Q6ZN03 302 aaPredicted RBP8□□□□□ -1.13
ZNF540-205ENST00000587220 MARCH1Q8TCQ1 289 aa8□□□□□ -1.13
ZNF540-205ENST00000587220 TMEM190Q8WZ59 177 aa8□□□□□ -1.13
ZNF540-205ENST00000587220 TMEM230Q96A57 120 aa8□□□□□ -1.13
ZNF540-205ENST00000587220 RNF126Q9BV68 326 aa8□□□□□ -1.13
ZNF540-205ENST00000587220 C5orf66Q9H5L9 145 aa8□□□□□ -1.13
ZNF540-205ENST00000587220 DAZ1Q9NQZ3 744 aaKnown RBP8□□□□□ -1.13
ZNF540-205ENST00000587220 FAM212BQ9NTI7 297 aaPredicted RBP8□□□□□ -1.13
ZNF540-205ENST00000587220 GAR1Q9NY12 217 aaKnown RBP8□□□□□ -1.13
ZNF540-205ENST00000587220 LOC102724200A0A096LPH7 203 aaPredicted RBP7.99□□□□□ -1.13
ZNF540-205ENST00000587220 LCE6AA0A183 80 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 NDUFA4O00483 81 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 CCSO14618 274 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 APOC3P02656 99 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 CTSDP07339 412 aaPredicted RBP7.99□□□□□ -1.13
ZNF540-205ENST00000587220 PGAM2P15259 253 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 BLOC1S1P78537 153 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 OR2C3Q8N628 320 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 BPIFCQ8NFQ6 507 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 MISP3Q96FF7 219 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 SEC22AQ96IW7 307 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 SMIM8Q96KF7 97 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 SPAG8Q99932 426 aaPredicted RBP7.99□□□□□ -1.13
ZNF540-205ENST00000587220 GGTLC1Q9BX51 225 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 SEC11CQ9BY50 192 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 CYTL1Q9NRR1 136 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 TMEM14BQ9NUH8 114 aa7.99□□□□□ -1.13
ZNF540-205ENST00000587220 C14orf166Q9Y224 244 aaKnown RBP7.99□□□□□ -1.13
ZNF540-205ENST00000587220 IGHV3OR16-8A0A075B7F1 116 aa7.98□□□□□ -1.13
ZNF540-205ENST00000587220 FAM25EA8MYX2 175 aa7.98□□□□□ -1.13
ZNF540-205ENST00000587220 NUPL2O15504 423 aaKnown RBP7.98□□□□□ -1.13
ZNF540-205ENST00000587220 YIF1AO95070 293 aa7.98□□□□□ -1.13
ZNF540-205ENST00000587220 SNAPINO95295 136 aa7.98□□□□□ -1.13
ZNF540-205ENST00000587220 C8orf88P0DMB2 117 aa7.98□□□□□ -1.13
ZNF540-205ENST00000587220 MFAP2P55001 183 aa7.98□□□□□ -1.13
ZNF540-205ENST00000587220 UCP3P55916 312 aa7.98□□□□□ -1.13
ZNF540-205ENST00000587220 SUPT4H1P63272 117 aaKnown RBP7.98□□□□□ -1.13
ZNF540-205ENST00000587220 RELQ04864 619 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-205ENST00000587220 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-205ENST00000587220 OR1P1Q8NH06 330 aa7.98□□□□□ -1.13
ZNF540-205ENST00000587220 PINX1Q96BK5 328 aaKnown RBP7.98□□□□□ -1.13
ZNF540-205ENST00000587220 ATP6V0BQ99437 205 aa7.98□□□□□ -1.13
ZNF540-205ENST00000587220 RTBDNQ9BSG5 229 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-205ENST00000587220 CSMD3Q7Z407 3707 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 PIGBOS1A0A0B4J2F0 54 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 OR4C46A6NHA9 309 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 K7EIM0 57 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 ZNF207O43670 478 aaKnown RBP7.97□□□□□ -1.13
ZNF540-205ENST00000587220 JTBO76095 146 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 IFNA21P01568 189 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 PI3P19957 117 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 SNCAP37840 140 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 AKR1C2P52895 323 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 APOC4P55056 127 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 PIGPP57054 158 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 ERHP84090 104 aaKnown RBP7.97□□□□□ -1.13
ZNF540-205ENST00000587220 PRCDQ00LT1 54 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms