RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 NPIPB3Q92617 1050 aa20.8■□□□□ 0.92
LIG3-208ENST00000586407 MAP6D1Q9H9H5 199 aa20.8■□□□□ 0.92
LIG3-208ENST00000586407 SFT2D2O95562 160 aa20.79■□□□□ 0.92
LIG3-208ENST00000586407 NPPCP23582 126 aa20.79■□□□□ 0.92
LIG3-208ENST00000586407 RPL11P62913 178 aaKnown RBP20.79■□□□□ 0.92
LIG3-208ENST00000586407 FAM24BQ8N5W8 94 aa20.79■□□□□ 0.92
LIG3-208ENST00000586407 OR1S2Q8NGQ3 325 aa20.79■□□□□ 0.92
LIG3-208ENST00000586407 DEDD2Q8WXF8 326 aa20.79■□□□□ 0.92
LIG3-208ENST00000586407 METTL26Q96S19 204 aa20.79■□□□□ 0.92
LIG3-208ENST00000586407 MS4A6AQ9H2W1 248 aa20.79■□□□□ 0.92
LIG3-208ENST00000586407 TRAV30A0A087WSZ9 112 aa20.78■□□□□ 0.92
LIG3-208ENST00000586407 PITX3O75364 302 aa20.78■□□□□ 0.92
LIG3-208ENST00000586407 IAPPP10997 89 aa20.78■□□□□ 0.92
LIG3-208ENST00000586407 BMI1P35226 326 aa20.78■□□□□ 0.92
LIG3-208ENST00000586407 RBMS2Q15434 407 aaKnown RBP20.78■□□□□ 0.92
LIG3-208ENST00000586407 DEFB135Q30KP9 77 aa20.78■□□□□ 0.92
LIG3-208ENST00000586407 FLVCR2Q9UPI3 526 aa20.78■□□□□ 0.92
LIG3-208ENST00000586407 SCGB2A1O75556 95 aa20.77■□□□□ 0.92
LIG3-208ENST00000586407 HOXB5P09067 269 aa20.77■□□□□ 0.92
LIG3-208ENST00000586407 APOC4P55056 127 aa20.77■□□□□ 0.92
LIG3-208ENST00000586407 LRTM2Q8N967 370 aa20.77■□□□□ 0.92
LIG3-208ENST00000586407 CACFD1Q9UGQ2 172 aa20.77■□□□□ 0.92
LIG3-208ENST00000586407 U3KQ87 197 aa20.77■□□□□ 0.92
LIG3-208ENST00000586407 DUXBA0A1W2PPF3 345 aa20.76■□□□□ 0.91
LIG3-208ENST00000586407 CRYBB3P26998 211 aa20.76■□□□□ 0.91
LIG3-208ENST00000586407 ETFRF1Q6IPR1 90 aa20.76■□□□□ 0.91
LIG3-208ENST00000586407 RABAC1Q9UI14 185 aa20.76■□□□□ 0.91
LIG3-208ENST00000586407 TENM2Q9NT68 2774 aa20.75■□□□□ 0.91
LIG3-208ENST00000586407 DNASE2O00115 360 aaPredicted RBP20.75■□□□□ 0.91
LIG3-208ENST00000586407 IFNA4P05014 189 aa20.75■□□□□ 0.91
LIG3-208ENST00000586407 P2RY1P47900 373 aa20.75■□□□□ 0.91
LIG3-208ENST00000586407 NOXA1Q86UR1 476 aa20.75■□□□□ 0.91
LIG3-208ENST00000586407 MAGT1Q9H0U3 335 aa20.75■□□□□ 0.91
LIG3-208ENST00000586407 TMEM231Q9H6L2 316 aa20.75■□□□□ 0.91
LIG3-208ENST00000586407 RYR3Q15413 4870 aa20.75■□□□□ 0.91
LIG3-208ENST00000586407 NDUFB6O95139 128 aa20.74■□□□□ 0.91
LIG3-208ENST00000586407 YPEL3P61236 119 aaPredicted RBP20.74■□□□□ 0.91
LIG3-208ENST00000586407 PAFAH1B2P68402 229 aa20.74■□□□□ 0.91
LIG3-208ENST00000586407 USF2Q15853 346 aaPredicted RBP20.74■□□□□ 0.91
LIG3-208ENST00000586407 STXBP6Q8NFX7 210 aa20.74■□□□□ 0.91
LIG3-208ENST00000586407 Q8WTZ3 238 aa20.74■□□□□ 0.91
LIG3-208ENST00000586407 BTCP35070 178 aa20.73■□□□□ 0.91
LIG3-208ENST00000586407 GGNBP1Q5YKI7 109 aa20.73■□□□□ 0.91
LIG3-208ENST00000586407 LEMD1Q68G75 181 aa20.73■□□□□ 0.91
LIG3-208ENST00000586407 STPG3Q8N7X2 389 aa20.73■□□□□ 0.91
LIG3-208ENST00000586407 PAIP2BQ9ULR5 123 aaKnown RBP20.73■□□□□ 0.91
LIG3-208ENST00000586407 DYNC2H1Q8NCM8 4307 aaKnown RBP20.73■□□□□ 0.91
LIG3-208ENST00000586407 AGRNO00468 2067 aa20.73■□□□□ 0.91
LIG3-208ENST00000586407 A0A1W2PS18 150 aa20.72■□□□□ 0.91
LIG3-208ENST00000586407 NAP1L6A6NFF2 107 aa20.72■□□□□ 0.91
LIG3-208ENST00000586407 SPRY2O43597 315 aa20.72■□□□□ 0.91
LIG3-208ENST00000586407 IL4P05112 153 aa20.72■□□□□ 0.91
LIG3-208ENST00000586407 IL7P13232 177 aa20.72■□□□□ 0.91
LIG3-208ENST00000586407 DEFB131AP59861 70 aa20.72■□□□□ 0.91
LIG3-208ENST00000586407 TMED3Q9Y3Q3 217 aa20.72■□□□□ 0.91
LIG3-208ENST00000586407 STARD9Q9P2P6 4700 aa20.72■□□□□ 0.91
LIG3-208ENST00000586407 CSMD3Q7Z407 3707 aa20.72■□□□□ 0.91
LIG3-208ENST00000586407 C9orf170A2RU37 121 aa20.71■□□□□ 0.91
LIG3-208ENST00000586407 ADAP1O75689 374 aa20.71■□□□□ 0.91
LIG3-208ENST00000586407 CD5P06127 495 aa20.71■□□□□ 0.91
LIG3-208ENST00000586407 Q6ZWC4 215 aa20.71■□□□□ 0.91
LIG3-208ENST00000586407 U3KQE9 123 aa20.71■□□□□ 0.91
LIG3-208ENST00000586407 PIGBOS1A0A0B4J2F0 54 aa20.7■□□□□ 0.9
LIG3-208ENST00000586407 KIR2DL5BA0A0G2JN68 375 aa20.7■□□□□ 0.9
LIG3-208ENST00000586407 KIR2DL5BA0A0G2JPC4 375 aa20.7■□□□□ 0.9
LIG3-208ENST00000586407 TOMM40O96008 361 aa20.7■□□□□ 0.9
LIG3-208ENST00000586407 HNRNPCP07910 306 aaKnown RBP eCLIP20.7■□□□□ 0.9
LIG3-208ENST00000586407 SLC25A6P12236 298 aa20.7■□□□□ 0.9
LIG3-208ENST00000586407 ANXA7P20073 488 aaKnown RBP20.7■□□□□ 0.9
LIG3-208ENST00000586407 KIR2DL5AQ8N109 375 aa20.7■□□□□ 0.9
LIG3-208ENST00000586407 KIR2DL5BQ8NHK3 375 aa20.7■□□□□ 0.9
LIG3-208ENST00000586407 NARS2Q96I59 477 aaKnown RBP20.7■□□□□ 0.9
LIG3-208ENST00000586407 MPTX1A8MV57 137 aa20.69■□□□□ 0.9
LIG3-208ENST00000586407 UBE2CO00762 179 aa20.69■□□□□ 0.9
LIG3-208ENST00000586407 RD3LP0DJH9 198 aa20.69■□□□□ 0.9
LIG3-208ENST00000586407 PSG1P11464 419 aa20.69■□□□□ 0.9
LIG3-208ENST00000586407 CMC4P56277 68 aaPredicted RBP20.69■□□□□ 0.9
LIG3-208ENST00000586407 GAMTQ14353 236 aa20.69■□□□□ 0.9
LIG3-208ENST00000586407 A0A0J9YWU9 116 aa20.68■□□□□ 0.9
LIG3-208ENST00000586407 K7EQG2 157 aa20.68■□□□□ 0.9
LIG3-208ENST00000586407 WRBO00258 174 aa20.68■□□□□ 0.9
LIG3-208ENST00000586407 UBE2MP61081 183 aaKnown RBP20.68■□□□□ 0.9
LIG3-208ENST00000586407 EWSR1Q01844 656 aaKnown RBP eCLIP20.68■□□□□ 0.9
LIG3-208ENST00000586407 OR51G1Q8NGK1 321 aa20.68■□□□□ 0.9
LIG3-208ENST00000586407 RNF183Q96D59 192 aa20.68■□□□□ 0.9
LIG3-208ENST00000586407 GRAMD2BQ96HH9 432 aa20.68■□□□□ 0.9
LIG3-208ENST00000586407 SLC35E1Q96K37 410 aa20.68■□□□□ 0.9
LIG3-208ENST00000586407 IGKV1D-37A0A075B6S9 117 aa20.67■□□□□ 0.9
LIG3-208ENST00000586407 TRAV2A0A0B4J234 112 aa20.67■□□□□ 0.9
LIG3-208ENST00000586407 FAM90A26D6RGX4 464 aa20.67■□□□□ 0.9
LIG3-208ENST00000586407 ZNF688P0C7X2 276 aa20.67■□□□□ 0.9
LIG3-208ENST00000586407 ZNF90Q03938 601 aa20.67■□□□□ 0.9
LIG3-208ENST00000586407 DHRS2Q13268 280 aa20.67■□□□□ 0.9
LIG3-208ENST00000586407 C16orf54Q6UWD8 224 aa20.67■□□□□ 0.9
LIG3-208ENST00000586407 GLMPQ8WWB7 406 aa20.67■□□□□ 0.9
LIG3-208ENST00000586407 NDUFA13Q9P0J0 144 aa20.67■□□□□ 0.9
LIG3-208ENST00000586407 TP53TG1Q9Y2A0 90 aa20.67■□□□□ 0.9
LIG3-208ENST00000586407 ZFP92A6NM28 416 aa20.66■□□□□ 0.9
LIG3-208ENST00000586407 SYNGR2O43760 224 aa20.66■□□□□ 0.9
LIG3-208ENST00000586407 OR4E1P0C645 316 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms