RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 FNDC4Q9H6D8 234 aaPredicted RBP8.23□□□□□ -1.09
LIG3-203ENST00000585370 TMEM231Q9H6L2 316 aa8.23□□□□□ -1.09
LIG3-203ENST00000585370 THYN1Q9P016 225 aa8.23□□□□□ -1.09
LIG3-203ENST00000585370 VAX2Q9UIW0 290 aa8.23□□□□□ -1.09
LIG3-203ENST00000585370 TRAV40A0A0B4J280 105 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 TCRBV4S1A1TA0A5B7 111 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 M0QZK8 103 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 REG1AP05451 166 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 STAG3L2P0CL84 134 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 STAG3L3P0CL85 134 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 HIST1H1BP16401 226 aaKnown RBP8.22□□□□□ -1.09
LIG3-203ENST00000585370 CD24P25063 80 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 TAS2R45P59539 299 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 DEFA5Q01523 94 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 ICAM4Q14773 271 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 MLANAQ16655 118 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 HAGHQ16775 308 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 SOHLH1Q5JUK2 328 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 C16orf82Q7Z2V1 217 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 TEX29Q8N6K0 151 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 OR4X1Q8NH49 305 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 OR2T6Q8NHC8 308 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 ACY3Q96HD9 319 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 RBM14Q96PK6 669 aaKnown RBP8.22□□□□□ -1.09
LIG3-203ENST00000585370 PFDN5Q99471 154 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 RARRES2Q99969 163 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 SLC25A33Q9BSK2 321 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 MRPL32Q9BYC8 188 aaKnown RBP8.22□□□□□ -1.09
LIG3-203ENST00000585370 SLC25A22Q9H936 323 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 GNG13Q9P2W3 67 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 PITPNC1Q9UKF7 332 aa8.22□□□□□ -1.09
LIG3-203ENST00000585370 IGKV1OR2-108A0A075B7D4 117 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 TRAV30A0A087WSZ9 112 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 ELOA3CA0A087WX78 387 aaPredicted RBP8.21□□□□□ -1.1
LIG3-203ENST00000585370 A0A1B0GV50 99 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 ZFP92A6NM28 416 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 I3L2K1 104 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 SCGB2A1O75556 95 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 SRP19P09132 144 aaKnown RBP8.21□□□□□ -1.1
LIG3-203ENST00000585370 RND2P52198 227 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 MFAP2P55001 183 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 KLK9Q2XQG4 91 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 SGMS2Q8NHU3 365 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 ZNF48Q96MX3 618 aaPredicted RBP8.21□□□□□ -1.1
LIG3-203ENST00000585370 DNAJC4Q9NNZ3 241 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 TNFRSF19Q9NS68 423 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 TECRQ9NZ01 308 aaKnown RBP8.21□□□□□ -1.1
LIG3-203ENST00000585370 KLK9Q9UKQ9 250 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 FUT9Q9Y231 359 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 MOB4Q9Y3A3 225 aa8.21□□□□□ -1.1
LIG3-203ENST00000585370 IGHV7-81A0A0B4J1V7 117 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 C9JQL5 133 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 TMEM250H0YL14 139 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 CLN5O75503 358 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 OR5G3P0C626 314 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 HNF1AP20823 631 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 NPBWR1P48145 328 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 FGF8P55075 233 aaPredicted RBP8.2□□□□□ -1.1
LIG3-203ENST00000585370 PLP1P60201 277 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 PQLC2Q6ZP29 291 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 SSX7Q7RTT5 188 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 S100A7AQ86SG5 101 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 RXFP4Q8TDU9 374 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 TXN2Q99757 166 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 SSX3Q99909 188 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 ARL2-SNX15V9GYD0 113 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 WNK2Q9Y3S1 2297 aa8.2□□□□□ -1.1
LIG3-203ENST00000585370 IGLV11-55A0A075B6I3 123 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 IGKV1D-37A0A075B6S9 117 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 A0A0U1RQK1 487 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 IGHV4-38-2P0DP08 117 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 ADCYAP1P18509 176 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 PAX6P26367 422 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 MFAP4P55083 255 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 MEF2BQ02080 365 aaPredicted RBP8.19□□□□□ -1.1
LIG3-203ENST00000585370 FAM74A3Q4VXF1 159 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 AKIRIN2Q53H80 203 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 GCSAMLQ5JQS6 135 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 FAM78BQ5VT40 261 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 RUSC1-AS1Q66K80 236 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 C5orf56Q8N8D9 126 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 STXBP6Q8NFX7 210 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 FAM110DQ8TAY7 271 aaPredicted RBP8.19□□□□□ -1.1
LIG3-203ENST00000585370 PIFOQ8TCI5 191 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 NKX6-2Q9C056 277 aaPredicted RBP8.19□□□□□ -1.1
LIG3-203ENST00000585370 TMEM167BQ9NRX6 74 aa8.19□□□□□ -1.1
LIG3-203ENST00000585370 A6NDX4 124 aa8.18□□□□□ -1.1
LIG3-203ENST00000585370 F6UZH7 168 aa8.18□□□□□ -1.1
LIG3-203ENST00000585370 K7EIM0 57 aa8.18□□□□□ -1.1
LIG3-203ENST00000585370 PDE6DO43924 150 aa8.18□□□□□ -1.1
LIG3-203ENST00000585370 COX7A2P2O60397 106 aa8.18□□□□□ -1.1
LIG3-203ENST00000585370 C8orf88P0DMB2 117 aa8.18□□□□□ -1.1
LIG3-203ENST00000585370 EGR2P11161 476 aaPredicted RBP8.18□□□□□ -1.1
LIG3-203ENST00000585370 GCHFRP30047 84 aa8.18□□□□□ -1.1
LIG3-203ENST00000585370 CRIP2P52943 208 aaPredicted RBP8.18□□□□□ -1.1
LIG3-203ENST00000585370 KLF17Q5JT82 389 aaPredicted RBP8.18□□□□□ -1.1
LIG3-203ENST00000585370 C10orf113Q5VZT2 155 aa8.18□□□□□ -1.1
LIG3-203ENST00000585370 BRD3OSQ6XYD6 125 aa8.18□□□□□ -1.1
LIG3-203ENST00000585370 CLRN3Q8NCR9 226 aa8.18□□□□□ -1.1
LIG3-203ENST00000585370 VN1R17PQ8TDU5 208 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms