RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 OR1S2Q8NGQ3 325 aa9.5□□□□□ -0.89
COPS3-218ENST00000584216 NRG4Q8WWG1 115 aa9.5□□□□□ -0.89
COPS3-218ENST00000584216 HSPG2P98160 4391 aa9.49□□□□□ -0.89
COPS3-218ENST00000584216 PRSS3P35030 304 aa9.49□□□□□ -0.89
COPS3-218ENST00000584216 NUP62P37198 522 aaPredicted RBP9.49□□□□□ -0.89
COPS3-218ENST00000584216 TNP2Q05952 138 aa9.49□□□□□ -0.89
COPS3-218ENST00000584216 TIGITQ495A1 244 aa9.49□□□□□ -0.89
COPS3-218ENST00000584216 UBE2NLQ5JXB2 153 aa9.49□□□□□ -0.89
COPS3-218ENST00000584216 TMEM88Q6PEY1 159 aa9.49□□□□□ -0.89
COPS3-218ENST00000584216 SIGLEC15Q6ZMC9 328 aa9.49□□□□□ -0.89
COPS3-218ENST00000584216 SPARTQ8N0X7 666 aa9.49□□□□□ -0.89
COPS3-218ENST00000584216 FNDC4Q9H6D8 234 aaPredicted RBP9.49□□□□□ -0.89
COPS3-218ENST00000584216 PFDN2Q9UHV9 154 aa9.49□□□□□ -0.89
COPS3-218ENST00000584216 GOLT1BQ9Y3E0 138 aa9.49□□□□□ -0.89
COPS3-218ENST00000584216 LOC100506127A0A0U1RQW1 187 aa9.48□□□□□ -0.89
COPS3-218ENST00000584216 HBE1P02100 147 aa9.48□□□□□ -0.89
COPS3-218ENST00000584216 SLC25A4P12235 298 aa9.48□□□□□ -0.89
COPS3-218ENST00000584216 HLA-DMAP28067 261 aa9.48□□□□□ -0.89
COPS3-218ENST00000584216 YPEL3P61236 119 aaPredicted RBP9.48□□□□□ -0.89
COPS3-218ENST00000584216 DAD1P61803 113 aa9.48□□□□□ -0.89
COPS3-218ENST00000584216 C6orf223Q8N319 242 aa9.48□□□□□ -0.89
COPS3-218ENST00000584216 MRPL36Q9P0J6 103 aaKnown RBP9.48□□□□□ -0.89
COPS3-218ENST00000584216 A0A0B4J293 547 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 IL4P05112 153 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 IGLC1P0CG04 106 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 OR10J1P30954 320 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 ID1P41134 155 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 HTR2BP41595 481 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 ALDH3B2P48448 385 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 IZUMO4Q1ZYL8 232 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 SPATA31B1PQ5VZV4 182 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 GSG1LQ6UXU4 331 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 IZUMO2Q6UXV1 221 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 FOXI2Q6ZQN5 318 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 RRNAD1Q96FB5 475 aaKnown RBP9.47□□□□□ -0.89
COPS3-218ENST00000584216 ZNF486Q96H40 463 aaPredicted RBP9.47□□□□□ -0.89
COPS3-218ENST00000584216 CLUHP3Q96NS8 147 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 C7orf50Q9BRJ6 194 aaKnown RBP9.47□□□□□ -0.89
COPS3-218ENST00000584216 YTHDF1Q9BYJ9 559 aaKnown RBP9.47□□□□□ -0.89
COPS3-218ENST00000584216 SCRT2Q9NQ03 307 aa9.47□□□□□ -0.89
COPS3-218ENST00000584216 NBDYA0A0U1RRE5 68 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 LOC102723971A0A1B0GUV8 181 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 IGKV1-5P01602 117 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 IGKV3-20P01619 116 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 PGAM2P15259 253 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 ETV6P41212 452 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 RND3P61587 244 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 DHODHQ02127 395 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 RRN3P1Q2M238 152 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 BSXQ3C1V8 233 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 ETFRF1Q6IPR1 90 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 LYSMD2Q8IV50 215 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 RNASE11Q8TAA1 199 aaKnown RBP9.46□□□□□ -0.9
COPS3-218ENST00000584216 RNASEH2CQ8TDP1 164 aaKnown RBP9.46□□□□□ -0.9
COPS3-218ENST00000584216 SAV1Q9H4B6 383 aaPredicted RBP9.46□□□□□ -0.9
COPS3-218ENST00000584216 SCPEP1Q9HB40 452 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 RAB26Q9ULW5 256 aa9.46□□□□□ -0.9
COPS3-218ENST00000584216 YTHDF2Q9Y5A9 579 aaKnown RBP9.46□□□□□ -0.9
COPS3-218ENST00000584216 AGRNO00468 2067 aa9.45□□□□□ -0.9
COPS3-218ENST00000584216 BUB3O43684 328 aa9.45□□□□□ -0.9
COPS3-218ENST00000584216 P0C879 139 aa9.45□□□□□ -0.9
COPS3-218ENST00000584216 RCVRNP35243 200 aa9.45□□□□□ -0.9
COPS3-218ENST00000584216 RND2P52198 227 aa9.45□□□□□ -0.9
COPS3-218ENST00000584216 SPCS3P61009 180 aa9.45□□□□□ -0.9
COPS3-218ENST00000584216 USF2Q15853 346 aaPredicted RBP9.45□□□□□ -0.9
COPS3-218ENST00000584216 MLANAQ16655 118 aa9.45□□□□□ -0.9
COPS3-218ENST00000584216 TRIM16LQ309B1 348 aa9.45□□□□□ -0.9
COPS3-218ENST00000584216 SAMD12Q8N8I0 201 aa9.45□□□□□ -0.9
COPS3-218ENST00000584216 OR4B1Q8NGF8 309 aa9.45□□□□□ -0.9
COPS3-218ENST00000584216 COQ8AQ8NI60 647 aa9.45□□□□□ -0.9
COPS3-218ENST00000584216 SMIM31A0A1B0GVY4 71 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 B3GALNT1O75752 331 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 RD3LP0DJH9 198 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 PSMB3P49720 205 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 FXYD7P58549 80 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 PSG9Q00887 426 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 SAMD13Q5VXD3 122 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 EBLN2Q6P2I7 272 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 PRSS54Q6PEW0 395 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 NOXA1Q86UR1 476 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 ZNF709Q8N972 641 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 GPX8Q8TED1 209 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 LINC00052Q96N35 136 aa9.44□□□□□ -0.9
COPS3-218ENST00000584216 C3orf85A0A1B0GTC6 90 aa9.43□□□□□ -0.9
COPS3-218ENST00000584216 TOMM40O96008 361 aa9.43□□□□□ -0.9
COPS3-218ENST00000584216 CCL18P55774 89 aa9.43□□□□□ -0.9
COPS3-218ENST00000584216 PIGPP57054 158 aa9.43□□□□□ -0.9
COPS3-218ENST00000584216 C2orf83Q53S99 150 aa9.43□□□□□ -0.9
COPS3-218ENST00000584216 GDF5OSQ5U4N7 250 aa9.43□□□□□ -0.9
COPS3-218ENST00000584216 FAM219AQ8IW50 185 aa9.43□□□□□ -0.9
COPS3-218ENST00000584216 OR52E5Q8NH55 327 aa9.43□□□□□ -0.9
COPS3-218ENST00000584216 TP53RKQ96S44 253 aa9.43□□□□□ -0.9
COPS3-218ENST00000584216 TMEM208Q9BTX3 173 aa9.43□□□□□ -0.9
COPS3-218ENST00000584216 MAGT1Q9H0U3 335 aa9.43□□□□□ -0.9
COPS3-218ENST00000584216 HEYLQ9NQ87 328 aaPredicted RBP9.43□□□□□ -0.9
COPS3-218ENST00000584216 LYRM9A8MSI8 78 aa9.42□□□□□ -0.9
COPS3-218ENST00000584216 RORCP51449 518 aa9.42□□□□□ -0.9
COPS3-218ENST00000584216 ZNF79Q15937 498 aa9.42□□□□□ -0.9
COPS3-218ENST00000584216 OR8G2PQ6IF36 304 aa9.42□□□□□ -0.9
COPS3-218ENST00000584216 CCDC71LQ8N9Z2 235 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms