RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 FKBP11Q9NYL4 201 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 KCNIP1Q9NZI2 227 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 GOLGA4Q13439 2230 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 ATG2BQ96BY7 2078 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 PIEZO1Q92508 2521 aa2.96□□□□□ -1.93
SMCHD1-208ENST00000583344 ALPK2Q86TB3 2170 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 IGHV3-38A0A0C4DH36 116 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 KIR2DL5BA0A0G2JN68 375 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 KIR2DL5BA0A0G2JPC4 375 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 C17orf112F2Z3M2 114 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 F6UZH7 168 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 G3V4G9 280 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 RAB29O14966 203 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 SYNGR1O43759 233 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 MPDU1O75352 247 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 TNFSF13O75888 250 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 MMP23AO75900 390 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 IGKV1D-33P01593 117 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 IGKV1-33P01594 117 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 GYPAP02724 150 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 CRYGBP07316 175 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 COX5AP20674 150 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 CD1BP29016 333 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 TDGF1P3P51864 188 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 UBE2NP61088 152 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 LYZP61626 148 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 RANP62826 216 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 GNG3P63215 75 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 SLC38A11Q08AI6 406 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 TMEM267Q0VDI3 215 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 Q0VG73 95 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 ADIRFQ15847 76 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 IGFBP7Q16270 282 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 ECSCRQ19T08 205 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 ALKBH6Q3KRA9 238 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 PRR30Q53SZ7 412 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 PDZD11Q5EBL8 140 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 LINC01551Q86U37 167 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 Q8IYB0 196 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 KIR2DL5AQ8N109 375 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 FAM58AQ8N1B3 248 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 C11orf42Q8N5U0 333 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 DRAM1Q8N682 238 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 OR4C5Q8NGB2 326 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 OR10P1Q8NGE3 313 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 OR10G9Q8NGN4 311 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 OR1K1Q8NGR3 316 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 PSMF1Q92530 271 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 TIMD4Q96H15 378 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 CIB3Q96Q77 187 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 ALKBH3Q96Q83 286 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 TMEM147Q9BVK8 224 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 DDA1Q9BW61 102 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 SNHG12Q9BXW3 62 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 Q9HAA7 133 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 TMEM9BQ9NQ34 198 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 KCNIP2Q9NS61 270 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 POLDIP2Q9Y2S7 368 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 LY96Q9Y6Y9 160 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 U3KQA8 63 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 CHD9Q3L8U1 2897 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 KMT2EQ8IZD2 1858 aa2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 TNRC6AQ8NDV7 1962 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 TDRD6O60522 2096 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-208ENST00000583344 CDH23Q9H251 3354 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 MUC3AQ02505 3323 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 ZNF705GA8MUZ8 300 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 J3QT63 122 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 NDUFS8O00217 210 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 DLEU1O43261 78 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 CXCL13O43927 109 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 MRPL33O75394 65 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 HPRT1P00492 218 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 CA1P00915 261 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 KRASP01116 189 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 P04436 131 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 OR4A8P0C604 315 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 LINC00614P0C842 121 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 IAPPP10997 89 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 LHX2P50458 406 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 IDH3GP51553 393 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 GPM6AP51674 278 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 FGF8P55075 233 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 ERVS71-1P61550 626 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 USF2Q15853 346 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 COX19Q49B96 90 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 SPANXN5Q5MJ07 72 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 TEX43Q6ZNM6 134 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 MRPL21Q7Z2W9 205 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 NUFIP2Q7Z417 695 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 ZNF645Q8N7E2 425 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 OR2Y1Q8NGV0 311 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 OR52E5Q8NH55 327 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 OR51H1Q8NH63 302 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 OR10D3Q8NH80 312 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 NEK7Q8TDX7 302 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 RDH5Q92781 318 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 MIEN1Q9BRT3 115 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 NPCDR1Q9BY65 106 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms