RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 SHPKQ9UHJ6 478 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 NSG2Q9Y328 171 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 OR51B2Q9Y5P1 312 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 DYNC1H1Q14204 4646 aaKnown RBP8.98□□□□□ -0.97
TOP3A-215ENST00000583328 DNAH11Q96DT5 4516 aa8.97□□□□□ -0.97
TOP3A-215ENST00000583328 DNAH2Q9P225 4427 aa8.97□□□□□ -0.97
TOP3A-215ENST00000583328 DNAH17Q9UFH2 4485 aa8.97□□□□□ -0.97
TOP3A-215ENST00000583328 A0A0G2JRQ6 117 aa8.97□□□□□ -0.97
TOP3A-215ENST00000583328 K7EMT4 169 aa8.97□□□□□ -0.97
TOP3A-215ENST00000583328 SLC25A24Q6NUK1 477 aa8.97□□□□□ -0.97
TOP3A-215ENST00000583328 SPSB3Q6PJ21 355 aa8.97□□□□□ -0.97
TOP3A-215ENST00000583328 OR1L8Q8NGR8 309 aa8.97□□□□□ -0.97
TOP3A-215ENST00000583328 RNF2Q99496 336 aa8.97□□□□□ -0.97
TOP3A-215ENST00000583328 SRSF8Q9BRL6 282 aaKnown RBP8.97□□□□□ -0.97
TOP3A-215ENST00000583328 QTRT1Q9BXR0 403 aaKnown RBP8.97□□□□□ -0.97
TOP3A-215ENST00000583328 KRTAP4-5Q9BYR2 181 aa8.97□□□□□ -0.97
TOP3A-215ENST00000583328 SMPXQ9UHP9 88 aa8.97□□□□□ -0.97
TOP3A-215ENST00000583328 PKHD1P08F94 4074 aa8.96□□□□□ -0.97
TOP3A-215ENST00000583328 IGHV4-4A0A075B6R2 117 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 IGHV3-21A0A0B4J1V1 117 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 TRAV10A0A0B4J240 114 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 TEX50A0A1B0GTY4 177 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 IGLC7A0M8Q6 106 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 DBX1A6NMT0 343 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 M0R2N4 97 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 RTL8CO15255 209 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 PTTG1O95997 202 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 HLA-DMBP28068 263 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 IZUMO4Q1ZYL8 232 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 NMSQ5H8A3 153 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 LYZL2Q7Z4W2 148 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 HSD17B13Q7Z5P4 300 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-215ENST00000583328 COQ8AQ8NI60 647 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 CHRDL1Q9BU40 450 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 RHPN1-AS1Q9BWJ2 59 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 HRH4Q9H3N8 390 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 NDUFA4L2Q9NRX3 87 aa8.96□□□□□ -0.98
TOP3A-215ENST00000583328 A0A0B4J293 547 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 C15orf62A8K5M9 175 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 CHEK1O14757 476 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 TRAPPC2P0DI81 140 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 TRAPPC2BP0DI82 140 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 SULT1A3P0DMM9 295 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 SULT1A4P0DMN0 295 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 HSPE1P61604 102 aaKnown RBP8.95□□□□□ -0.98
TOP3A-215ENST00000583328 PAFAH1B2P68402 229 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 AARDQ4LEZ3 155 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 Q6ZRM9 215 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 GBGT1Q8N5D6 347 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 POM121L12Q8N7R1 296 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 UBAC2Q8NBM4 344 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 TMEM116Q8NCL8 245 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 MITD1Q8WV92 249 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 GPR146Q96CH1 333 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 MARVELD1Q9BSK0 173 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 PDCD10Q9BUL8 212 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.95□□□□□ -0.98
TOP3A-215ENST00000583328 C21orf62Q9NYP8 219 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 PLA2G2EQ9NZK7 142 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 CACNG5Q9UF02 275 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 TMED3Q9Y3Q3 217 aa8.95□□□□□ -0.98
TOP3A-215ENST00000583328 IGHV3-49A0A0A0MS15 119 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 IGHV7-4-1A0A0J9YVY3 117 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 INMT-MINDY4F8WBC2 141 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 ST8SIA3O43173 380 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 PRAF2O60831 178 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 IL5P05113 134 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 OR13C7P0DN81 318 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 PRCDQ00LT1 54 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 SMCO1Q147U7 214 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 Q56UQ5 140 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 PVRIGQ6DKI7 326 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 Q6ZTC4 211 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 Q8NAQ8 132 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 OR10W1Q8NGF6 305 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 ZNF431Q8TF32 576 aaPredicted RBP8.94□□□□□ -0.98
TOP3A-215ENST00000583328 SEC22CQ9BRL7 303 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 RNF126Q9BV68 326 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 HINT2Q9BX68 163 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 CACFD1Q9UGQ2 172 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 ABCA13Q86UQ4 5058 aa8.94□□□□□ -0.98
TOP3A-215ENST00000583328 IGHV4-28A0A0C4DH34 117 aa8.93□□□□□ -0.98
TOP3A-215ENST00000583328 A0A1B0GU03 582 aa8.93□□□□□ -0.98
TOP3A-215ENST00000583328 YIF1AO95070 293 aa8.93□□□□□ -0.98
TOP3A-215ENST00000583328 IFNA17P01571 189 aa8.93□□□□□ -0.98
TOP3A-215ENST00000583328 HOXB5P09067 269 aa8.93□□□□□ -0.98
TOP3A-215ENST00000583328 RBMY1A1P0DJD3 496 aaKnown RBP8.93□□□□□ -0.98
TOP3A-215ENST00000583328 RBMY1CP0DJD4 496 aa8.93□□□□□ -0.98
TOP3A-215ENST00000583328 SLC25A6P12236 298 aa8.93□□□□□ -0.98
TOP3A-215ENST00000583328 SPCS3P61009 180 aa8.93□□□□□ -0.98
TOP3A-215ENST00000583328 WT1-ASQ06250 92 aa8.93□□□□□ -0.98
TOP3A-215ENST00000583328 RBMY1FQ15415 496 aaKnown RBP8.93□□□□□ -0.98
TOP3A-215ENST00000583328 OR52E5Q8NH55 327 aa8.93□□□□□ -0.98
TOP3A-215ENST00000583328 SCARB1Q8WTV0 552 aa8.93□□□□□ -0.98
TOP3A-215ENST00000583328 ATP6V0BQ99437 205 aa8.93□□□□□ -0.98
TOP3A-215ENST00000583328 GPN1Q9HCN4 374 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-215ENST00000583328 INS-IGF2F8WCM5 200 aa8.92□□□□□ -0.98
TOP3A-215ENST00000583328 DNASE2O00115 360 aaPredicted RBP8.92□□□□□ -0.98
TOP3A-215ENST00000583328 IFNA21P01568 189 aa8.92□□□□□ -0.98
TOP3A-215ENST00000583328 P0DMU3 169 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms