RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 SRPXP78539 464 aa16.44■□□□□ 0.22
CASC3-207ENST00000581849 ZNF124Q15973 351 aa16.44■□□□□ 0.22
CASC3-207ENST00000581849 NMSQ5H8A3 153 aa16.44■□□□□ 0.22
CASC3-207ENST00000581849 ETFRF1Q6IPR1 90 aa16.44■□□□□ 0.22
CASC3-207ENST00000581849 SHPKQ9UHJ6 478 aa16.44■□□□□ 0.22
CASC3-207ENST00000581849 CXorf65A6NEN9 183 aa16.43■□□□□ 0.22
CASC3-207ENST00000581849 IGLC1P0CG04 106 aa16.43■□□□□ 0.22
CASC3-207ENST00000581849 CCR6P51684 374 aa16.43■□□□□ 0.22
CASC3-207ENST00000581849 YPEL3P61236 119 aaPredicted RBP16.43■□□□□ 0.22
CASC3-207ENST00000581849 RPL11P62913 178 aaKnown RBP16.43■□□□□ 0.22
CASC3-207ENST00000581849 PRSS54Q6PEW0 395 aa16.43■□□□□ 0.22
CASC3-207ENST00000581849 MCFD2Q8NI22 146 aa16.43■□□□□ 0.22
CASC3-207ENST00000581849 GRAMD2BQ96HH9 432 aa16.43■□□□□ 0.22
CASC3-207ENST00000581849 IGHV3-66A0A0C4DH42 116 aa16.42■□□□□ 0.22
CASC3-207ENST00000581849 ANXA3P12429 323 aa16.42■□□□□ 0.22
CASC3-207ENST00000581849 NPY1RP25929 384 aa16.42■□□□□ 0.22
CASC3-207ENST00000581849 FAUP35544 74 aaKnown RBP16.42■□□□□ 0.22
CASC3-207ENST00000581849 P2RY1P47900 373 aa16.42■□□□□ 0.22
CASC3-207ENST00000581849 RND2P52198 227 aa16.42■□□□□ 0.22
CASC3-207ENST00000581849 TIGITQ495A1 244 aa16.42■□□□□ 0.22
CASC3-207ENST00000581849 Q8WTZ3 238 aa16.42■□□□□ 0.22
CASC3-207ENST00000581849 MCUBQ9NWR8 336 aa16.42■□□□□ 0.22
CASC3-207ENST00000581849 U3KQE9 123 aa16.42■□□□□ 0.22
CASC3-207ENST00000581849 EIF2B2P49770 351 aaKnown RBP16.41■□□□□ 0.22
CASC3-207ENST00000581849 ATP5IP56385 69 aaPredicted RBP16.41■□□□□ 0.22
CASC3-207ENST00000581849 DEFB131AP59861 70 aa16.41■□□□□ 0.22
CASC3-207ENST00000581849 EWSR1Q01844 656 aaKnown RBP eCLIP16.41■□□□□ 0.22
CASC3-207ENST00000581849 TMEM170AQ8WVE7 144 aa16.41■□□□□ 0.22
CASC3-207ENST00000581849 DEDD2Q8WXF8 326 aa16.41■□□□□ 0.22
CASC3-207ENST00000581849 HSPB7Q9UBY9 170 aa16.41■□□□□ 0.22
CASC3-207ENST00000581849 U3KQ87 197 aa16.41■□□□□ 0.22
CASC3-207ENST00000581849 K7EQG2 157 aa16.4■□□□□ 0.22
CASC3-207ENST00000581849 OR10J1P30954 320 aa16.4■□□□□ 0.22
CASC3-207ENST00000581849 AP3S2P59780 193 aa16.4■□□□□ 0.22
CASC3-207ENST00000581849 SUPT4H1P63272 117 aaKnown RBP16.4■□□□□ 0.22
CASC3-207ENST00000581849 SMCO1Q147U7 214 aa16.4■□□□□ 0.22
CASC3-207ENST00000581849 CEMP1Q6PRD7 247 aaPredicted RBP16.4■□□□□ 0.22
CASC3-207ENST00000581849 LGI3Q8N145 548 aa16.4■□□□□ 0.22
CASC3-207ENST00000581849 RABAC1Q9UI14 185 aa16.4■□□□□ 0.22
CASC3-207ENST00000581849 DUXBA0A1W2PPF3 345 aa16.39■□□□□ 0.21
CASC3-207ENST00000581849 HELTA6NFD8 242 aa16.39■□□□□ 0.21
CASC3-207ENST00000581849 PMS2P11Q13670 270 aa16.39■□□□□ 0.21
CASC3-207ENST00000581849 KLF9Q13886 244 aaPredicted RBP16.39■□□□□ 0.21
CASC3-207ENST00000581849 TRIM63Q969Q1 353 aa16.39■□□□□ 0.21
CASC3-207ENST00000581849 RARRES2Q99969 163 aa16.39■□□□□ 0.21
CASC3-207ENST00000581849 C11orf68Q9H3H3 251 aaKnown RBP16.39■□□□□ 0.21
CASC3-207ENST00000581849 HNRNPCP07910 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
CASC3-207ENST00000581849 AKR1C4P17516 323 aa16.38■□□□□ 0.21
CASC3-207ENST00000581849 AP2S1P53680 142 aaPredicted RBP16.38■□□□□ 0.21
CASC3-207ENST00000581849 TMEM41BQ5BJD5 291 aa16.38■□□□□ 0.21
CASC3-207ENST00000581849 FAM24BQ8N5W8 94 aa16.38■□□□□ 0.21
CASC3-207ENST00000581849 STXBP6Q8NFX7 210 aa16.38■□□□□ 0.21
CASC3-207ENST00000581849 LINC00476Q8WZB0 136 aa16.38■□□□□ 0.21
CASC3-207ENST00000581849 KLK5Q9Y337 293 aaPredicted RBP16.38■□□□□ 0.21
CASC3-207ENST00000581849 CA1P00915 261 aaPredicted RBP16.37■□□□□ 0.21
CASC3-207ENST00000581849 RBMS2Q15434 407 aaKnown RBP16.37■□□□□ 0.21
CASC3-207ENST00000581849 LEMD1Q68G75 181 aa16.37■□□□□ 0.21
CASC3-207ENST00000581849 LYZL2Q7Z4W2 148 aa16.37■□□□□ 0.21
CASC3-207ENST00000581849 STHQ8IWL8 128 aa16.37■□□□□ 0.21
CASC3-207ENST00000581849 DTD1Q8TEA8 209 aa16.37■□□□□ 0.21
CASC3-207ENST00000581849 DCANP1Q8TF63 244 aa16.37■□□□□ 0.21
CASC3-207ENST00000581849 PRR13Q9NZ81 148 aa16.37■□□□□ 0.21
CASC3-207ENST00000581849 EPPK1P58107 5090 aaKnown RBP16.37■□□□□ 0.21
CASC3-207ENST00000581849 TOMM40O96008 361 aa16.36■□□□□ 0.21
CASC3-207ENST00000581849 IFNA10P01566 189 aa16.36■□□□□ 0.21
CASC3-207ENST00000581849 TMEM128Q5BJH2 165 aa16.36■□□□□ 0.21
CASC3-207ENST00000581849 MORN3Q6PF18 240 aaPredicted RBP16.36■□□□□ 0.21
CASC3-207ENST00000581849 C16orf54Q6UWD8 224 aa16.36■□□□□ 0.21
CASC3-207ENST00000581849 TOMM5Q8N4H5 51 aa16.36■□□□□ 0.21
CASC3-207ENST00000581849 OR11H2Q8NH07 326 aa16.36■□□□□ 0.21
CASC3-207ENST00000581849 GLMPQ8WWB7 406 aa16.36■□□□□ 0.21
CASC3-207ENST00000581849 NPIPB3Q92617 1050 aa16.36■□□□□ 0.21
CASC3-207ENST00000581849 NXPH3O95157 252 aa16.35■□□□□ 0.21
CASC3-207ENST00000581849 SPP1P10451 314 aa16.35■□□□□ 0.21
CASC3-207ENST00000581849 TRPT1Q86TN4 253 aaKnown RBP16.35■□□□□ 0.21
CASC3-207ENST00000581849 SLC25A21Q9BQT8 299 aaPredicted RBP16.35■□□□□ 0.21
CASC3-207ENST00000581849 MFFQ9GZY8 342 aa16.35■□□□□ 0.21
CASC3-207ENST00000581849 SEPSECSQ9HD40 501 aaKnown RBP16.35■□□□□ 0.21
CASC3-207ENST00000581849 V9GYH0 126 aa16.35■□□□□ 0.21
CASC3-207ENST00000581849 IL4P05112 153 aa16.34■□□□□ 0.21
CASC3-207ENST00000581849 RD3LP0DJH9 198 aa16.34■□□□□ 0.21
CASC3-207ENST00000581849 S100A5P33763 92 aa16.34■□□□□ 0.21
CASC3-207ENST00000581849 PYDC2Q56P42 97 aa16.34■□□□□ 0.21
CASC3-207ENST00000581849 LRTM2Q8N967 370 aa16.34■□□□□ 0.21
CASC3-207ENST00000581849 ACY3Q96HD9 319 aa16.34■□□□□ 0.21
CASC3-207ENST00000581849 RBKSQ9H477 322 aa16.34■□□□□ 0.21
CASC3-207ENST00000581849 BIRC6Q9NR09 4857 aa16.33■□□□□ 0.2
CASC3-207ENST00000581849 SLC25A6P12236 298 aa16.33■□□□□ 0.2
CASC3-207ENST00000581849 GPX4P36969 197 aaPredicted RBP16.33■□□□□ 0.2
CASC3-207ENST00000581849 NUP62P37198 522 aaPredicted RBP16.33■□□□□ 0.2
CASC3-207ENST00000581849 USF2Q15853 346 aaPredicted RBP16.33■□□□□ 0.2
CASC3-207ENST00000581849 OR1S1Q8NH92 325 aa16.33■□□□□ 0.2
CASC3-207ENST00000581849 FAM90A26D6RGX4 464 aa16.32■□□□□ 0.2
CASC3-207ENST00000581849 BUB3O43684 328 aa16.32■□□□□ 0.2
CASC3-207ENST00000581849 PITX3O75364 302 aa16.32■□□□□ 0.2
CASC3-207ENST00000581849 ZNF688P0C7X2 276 aa16.32■□□□□ 0.2
CASC3-207ENST00000581849 ZNF79Q15937 498 aa16.32■□□□□ 0.2
CASC3-207ENST00000581849 TMED4Q7Z7H5 227 aa16.32■□□□□ 0.2
CASC3-207ENST00000581849 PHLDA1Q8WV24 401 aaPredicted RBP16.32■□□□□ 0.2
CASC3-207ENST00000581849 IFNA4P05014 189 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms