RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 SMDT1Q9H4I9 107 aa3□□□□□ -1.93
SMG8-205ENST00000580798 PLEKHF2Q9H8W4 249 aa3□□□□□ -1.93
SMG8-205ENST00000580798 SIX2Q9NPC8 291 aa3□□□□□ -1.93
SMG8-205ENST00000580798 C21orf62Q9NYP8 219 aa3□□□□□ -1.93
SMG8-205ENST00000580798 CACFD1Q9UGQ2 172 aa3□□□□□ -1.93
SMG8-205ENST00000580798 LINC00312Q9Y6C7 94 aa3□□□□□ -1.93
SMG8-205ENST00000580798 SERP1Q9Y6X1 66 aa3□□□□□ -1.93
SMG8-205ENST00000580798 MYH11P35749 1972 aa3□□□□□ -1.93
SMG8-205ENST00000580798 SYNJ1O43426 1573 aa3□□□□□ -1.93
SMG8-205ENST00000580798 HECW2Q9P2P5 1572 aa3□□□□□ -1.93
SMG8-205ENST00000580798 IGHV7-81A0A0B4J1V7 117 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 IGHV3-20A0A0C4DH32 117 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 TRBV27A0A0K0K1C4 114 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 A0A1B0GW54 56 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 A0A1W2PNU3 283 aaPredicted RBP2.99□□□□□ -1.93
SMG8-205ENST00000580798 EPOPA6NHQ4 379 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 A8MUN3 132 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 MCRIP1C9JLW8 97 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 H3BRM9 83 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 K7EQD1 137 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 SOCS1O15524 211 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 SYNGR2O43760 224 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 ZNF73O43830 326 aaPredicted RBP2.99□□□□□ -1.93
SMG8-205ENST00000580798 SSSCA1O60232 199 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 HIST1H2BKO60814 126 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 PROSCO94903 275 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 RBP4P02753 201 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 HLA-DPB1P04440 258 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 HIST1H2BJP06899 126 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 FRMD6-AS1P0C7T7 363 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 PATE4P0C8F1 98 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 IGLL1P15814 213 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 NMUP48645 174 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 HINT1P49773 126 aaPredicted RBP2.99□□□□□ -1.93
SMG8-205ENST00000580798 POLR2JP52435 117 aaKnown RBP2.99□□□□□ -1.93
SMG8-205ENST00000580798 YPEL3P61236 119 aaPredicted RBP2.99□□□□□ -1.93
SMG8-205ENST00000580798 UBE2BP63146 152 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 CXCL6P80162 114 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 KIAA0087Q14695 138 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 CDK5R1Q15078 307 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 LGALSLQ3ZCW2 172 aaPredicted RBP2.99□□□□□ -1.93
SMG8-205ENST00000580798 EBLN2Q6P2I7 272 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 UNQ9165/PRO28630Q6UXU0 137 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 SCXQ7RTU7 201 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 TEN1Q86WV5 123 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 ZNF843Q8N446 348 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 RPP25LQ8N5L8 163 aaKnown RBP2.99□□□□□ -1.93
SMG8-205ENST00000580798 LINC00311Q8N616 119 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 LINC00337Q8N6G1 96 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 MAPK1IP1LQ8NDC0 245 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 OR5C1Q8NGR4 320 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 OR1J4Q8NGS1 313 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 H1FXQ92522 213 aaKnown RBP2.99□□□□□ -1.93
SMG8-205ENST00000580798 RMI2Q96E14 147 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 FAM218AQ96MZ4 157 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 TIMM17AQ99595 171 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 DPM3Q9P2X0 92 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 CTSZQ9UBR2 303 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 RNF11Q9Y3C5 154 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 MYH3P11055 1940 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 NRKQ7Z2Y5 1582 aa2.99□□□□□ -1.93
SMG8-205ENST00000580798 ZNF106Q9H2Y7 1883 aaKnown RBP2.99□□□□□ -1.93
SMG8-205ENST00000580798 PHIPQ8WWQ0 1821 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 IGHV1OR15-1A0A075B7D0 117 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 M0R378 163 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 NXPH4O95158 308 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 UBL3O95164 117 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 IGLV3-27P01718 113 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 MT-ATP8P03928 68 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 IGHV1-2P23083 117 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 BTCP35070 178 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 CSN1S1P47710 185 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 ZNF138P52744 262 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 HERVK_113P61574 105 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 NPC2P61916 151 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 RPL23P62829 140 aaKnown RBP2.98□□□□□ -1.93
SMG8-205ENST00000580798 PMCHL1Q16048 86 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 TMEM91Q6ZNR0 172 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
SMG8-205ENST00000580798 PRNTQ86SH4 94 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 ZNF584Q8IVC4 421 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 ZNF101Q8IZC7 436 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 NKAPP1Q8N9T2 125 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 WFDC11Q8NEX6 87 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 ZNF799Q96GE5 643 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 PRELID3AQ96N28 172 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 ZNF714Q96N38 554 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 PYGO2Q9BRQ0 406 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 AIG1Q9NVV5 245 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 ZNF222Q9UK12 451 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 RGS12O14924 1447 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 ANKARQ7Z5J8 1434 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 PHLPP1O60346 1717 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 TOP2AP11388 1531 aaKnown RBP2.98□□□□□ -1.93
SMG8-205ENST00000580798 ARID2Q68CP9 1835 aa2.98□□□□□ -1.93
SMG8-205ENST00000580798 PLEKHH2Q8IVE3 1493 aa2.97□□□□□ -1.93
SMG8-205ENST00000580798 NLRP1Q9C000 1473 aa2.97□□□□□ -1.93
SMG8-205ENST00000580798 A0A087WWC5 75 aa2.97□□□□□ -1.93
SMG8-205ENST00000580798 IGKV6D-41A0A0C4DH26 115 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms