RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 RARRES2Q99969 163 aa10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 HRH4Q9H3N8 390 aa10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 U3KQ87 197 aa10.63□□□□□ -0.71
SMARCE1-216ENST00000580419 A0A0B4J2A0 478 aa10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 APOHP02749 345 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 SPP1P10451 314 aa10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 EWSR1Q01844 656 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 SPINK9Q5DT21 86 aa10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 RNASE12Q5GAN4 147 aaKnown RBP10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 PRSS54Q6PEW0 395 aa10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 SLC24A4Q8NFF2 622 aa10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 Q8WTZ3 238 aa10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 HEYLQ9NQ87 328 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 MRPL36Q9P0J6 103 aaKnown RBP10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 CACNG5Q9UF02 275 aa10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 SHPKQ9UHJ6 478 aa10.62□□□□□ -0.71
SMARCE1-216ENST00000580419 IGHV3-49A0A0A0MS15 119 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 DUXBA0A1W2PPF3 345 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 SULT1A3P0DMM9 295 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 SULT1A4P0DMN0 295 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 NUP62P37198 522 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 P2RY1P47900 373 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 CCR6P51684 374 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 IL18Q14116 193 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 TMEM187Q14656 261 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 TMEM268Q5VZI3 342 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 OR51S1Q8NGJ8 323 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 DCANP1Q8TF63 244 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 TMEM230Q96A57 120 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 GPR146Q96CH1 333 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 SLIRPQ9GZT3 109 aaKnown RBP10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 HSPB7Q9UBY9 170 aa10.61□□□□□ -0.71
SMARCE1-216ENST00000580419 TFPI2P48307 235 aa10.6□□□□□ -0.71
SMARCE1-216ENST00000580419 DEFB131AP59861 70 aa10.6□□□□□ -0.71
SMARCE1-216ENST00000580419 LGALS9CQ6DKI2 356 aa10.6□□□□□ -0.71
SMARCE1-216ENST00000580419 TRPT1Q86TN4 253 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-216ENST00000580419 CLVS1Q8IUQ0 354 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-216ENST00000580419 STHQ8IWL8 128 aa10.6□□□□□ -0.71
SMARCE1-216ENST00000580419 GBGT1Q8N5D6 347 aa10.6□□□□□ -0.71
SMARCE1-216ENST00000580419 OR11H2Q8NH07 326 aa10.6□□□□□ -0.71
SMARCE1-216ENST00000580419 PHLDA1Q8WV24 401 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-216ENST00000580419 IGHV3OR16-13A0A075B7E8 117 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 IGHV3-74A0A0B4J1X5 117 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 HNRNPCP07910 306 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 SLC25A6P12236 298 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 ANXA3P12429 323 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 NPY1RP25929 384 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 OR10J1P30954 320 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 RPL11P62913 178 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 MLANAQ16655 118 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 FAAP20Q6NZ36 180 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 C16orf54Q6UWD8 224 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 TMEM170AQ8WVE7 144 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 GLMPQ8WWB7 406 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 PFDN2Q9UHV9 154 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 FRAS1Q86XX4 4008 aa10.59□□□□□ -0.71
SMARCE1-216ENST00000580419 IGKV3-7A0A075B6H7 116 aa10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 CEBPZOSA8MTT3 80 aa10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 ZNF705EA8MWA4 302 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 TOMM40O96008 361 aa10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 CA1P00915 261 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 MIFP14174 115 aa10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 FAUP35544 74 aaKnown RBP10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 GPX4P36969 197 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 RND2P52198 227 aa10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 AP3S2P59780 193 aa10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 SMCO1Q147U7 214 aa10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 ZNF124Q15973 351 aa10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 OR8G2PQ6IF36 304 aa10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 LRTM2Q8N967 370 aa10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 C11orf45Q8TAV5 145 aa10.58□□□□□ -0.72
SMARCE1-216ENST00000580419 FABP12A6NFH5 140 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 C11orf94C9JXX5 98 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 FAM90A26D6RGX4 464 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 BUB3O43684 328 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 GIG44P09565 113 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 TNFSF8P32971 234 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 SUPT4H1P63272 117 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 PMS2P11Q13670 270 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 TIGITQ495A1 244 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 TMEM128Q5BJH2 165 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 LGI3Q8N145 548 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 Q8NAQ8 132 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 CLUHP3Q96NS8 147 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 SLC25A21Q9BQT8 299 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 RABAC1Q9UI14 185 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 VPS13DQ5THJ4 4388 aa10.57□□□□□ -0.72
SMARCE1-216ENST00000580419 DNAH6Q9C0G6 4158 aa10.56□□□□□ -0.72
SMARCE1-216ENST00000580419 H3BMQ9 156 aa10.56□□□□□ -0.72
SMARCE1-216ENST00000580419 NOL3O60936 208 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-216ENST00000580419 PITX3O75364 302 aa10.56□□□□□ -0.72
SMARCE1-216ENST00000580419 IFNA4P05014 189 aa10.56□□□□□ -0.72
SMARCE1-216ENST00000580419 RD3LP0DJH9 198 aa10.56□□□□□ -0.72
SMARCE1-216ENST00000580419 SNRPD3P62318 126 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-216ENST00000580419 RBMS2Q15434 407 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-216ENST00000580419 C1orf194Q5T5A4 169 aa10.56□□□□□ -0.72
SMARCE1-216ENST00000580419 SAMD13Q5VXD3 122 aa10.56□□□□□ -0.72
SMARCE1-216ENST00000580419 FAM24BQ8N5W8 94 aa10.56□□□□□ -0.72
SMARCE1-216ENST00000580419 STXBP6Q8NFX7 210 aa10.56□□□□□ -0.72
SMARCE1-216ENST00000580419 DTD1Q8TEA8 209 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms