RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 YPEL3P61236 119 aaPredicted RBP11.05□□□□□ -0.64
SS18-212ENST00000579061 IGHV3-49A0A0A0MS15 119 aa11.04□□□□□ -0.64
SS18-212ENST00000579061 A0A1W2PS18 150 aa11.04□□□□□ -0.64
SS18-212ENST00000579061 MED6O75586 246 aa11.04□□□□□ -0.64
SS18-212ENST00000579061 IGLC1P0CG04 106 aa11.04□□□□□ -0.64
SS18-212ENST00000579061 CRYBB3P26998 211 aa11.04□□□□□ -0.64
SS18-212ENST00000579061 PAFAH1B2P68402 229 aa11.04□□□□□ -0.64
SS18-212ENST00000579061 CNPY1Q3B7I2 92 aa11.04□□□□□ -0.64
SS18-212ENST00000579061 ODF3L2Q3SX64 289 aa11.04□□□□□ -0.64
SS18-212ENST00000579061 TIGITQ495A1 244 aa11.04□□□□□ -0.64
SS18-212ENST00000579061 TCF24Q7RTU0 167 aa11.04□□□□□ -0.64
SS18-212ENST00000579061 ST8SIA2Q92186 375 aa11.04□□□□□ -0.64
SS18-212ENST00000579061 METTL26Q96S19 204 aa11.04□□□□□ -0.64
SS18-212ENST00000579061 IGHV3OR16-13A0A075B7E8 117 aa11.03□□□□□ -0.64
SS18-212ENST00000579061 IGHV3-74A0A0B4J1X5 117 aa11.03□□□□□ -0.64
SS18-212ENST00000579061 TRAV2A0A0B4J234 112 aa11.03□□□□□ -0.64
SS18-212ENST00000579061 IL7P13232 177 aa11.03□□□□□ -0.64
SS18-212ENST00000579061 OR10J1P30954 320 aa11.03□□□□□ -0.64
SS18-212ENST00000579061 LINC00299Q6ZSB3 139 aa11.03□□□□□ -0.64
SS18-212ENST00000579061 Q8WTZ3 238 aa11.03□□□□□ -0.64
SS18-212ENST00000579061 UBQLN2Q9UHD9 624 aa11.03□□□□□ -0.64
SS18-212ENST00000579061 C9orf170A2RU37 121 aa11.02□□□□□ -0.65
SS18-212ENST00000579061 APOHP02749 345 aaPredicted RBP11.02□□□□□ -0.65
SS18-212ENST00000579061 BTCP35070 178 aa11.02□□□□□ -0.65
SS18-212ENST00000579061 GPX4P36969 197 aaPredicted RBP11.02□□□□□ -0.65
SS18-212ENST00000579061 NPIPB3Q92617 1050 aa11.02□□□□□ -0.65
SS18-212ENST00000579061 NARS2Q96I59 477 aaKnown RBP11.02□□□□□ -0.65
SS18-212ENST00000579061 CIB3Q96Q77 187 aaPredicted RBP11.02□□□□□ -0.65
SS18-212ENST00000579061 KIR2DL5BA0A0G2JN68 375 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 KIR2DL5BA0A0G2JPC4 375 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 UBE2CO00762 179 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 IFNA4P05014 189 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 HOXB5P09067 269 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 LYL1P12980 280 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 APOC4P55056 127 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 RAB11AP62491 216 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 CASC10Q5T4H9 136 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 GGNBP1Q5YKI7 109 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 KIR2DL5AQ8N109 375 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 LILRB2Q8N423 598 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 KIR2DL5BQ8NHK3 375 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 COQ8AQ8NI60 647 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 RETNQ9HD89 108 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 U3KQE9 123 aa11.01□□□□□ -0.65
SS18-212ENST00000579061 KMT2CQ8NEZ4 4911 aaKnown RBP11.01□□□□□ -0.65
SS18-212ENST00000579061 LINC00854A0A1B0GVQ3 168 aa11□□□□□ -0.65
SS18-212ENST00000579061 SYNGR2O43760 224 aa11□□□□□ -0.65
SS18-212ENST00000579061 DFFBO76075 338 aa11□□□□□ -0.65
SS18-212ENST00000579061 TOMM40O96008 361 aa11□□□□□ -0.65
SS18-212ENST00000579061 OR4E1P0C645 316 aa11□□□□□ -0.65
SS18-212ENST00000579061 RPP30P78346 268 aaKnown RBP11□□□□□ -0.65
SS18-212ENST00000579061 DHRS2Q13268 280 aa11□□□□□ -0.65
SS18-212ENST00000579061 Q6ZWC4 215 aa11□□□□□ -0.65
SS18-212ENST00000579061 LYG2Q86SG7 212 aa11□□□□□ -0.65
SS18-212ENST00000579061 ACY3Q96HD9 319 aa11□□□□□ -0.65
SS18-212ENST00000579061 GRAMD2BQ96HH9 432 aa11□□□□□ -0.65
SS18-212ENST00000579061 MS4A6AQ9H2W1 248 aa11□□□□□ -0.65
SS18-212ENST00000579061 FLVCR2Q9UPI3 526 aa11□□□□□ -0.65
SS18-212ENST00000579061 TP53TG1Q9Y2A0 90 aa11□□□□□ -0.65
SS18-212ENST00000579061 IGKV3-7A0A075B6H7 116 aa10.99□□□□□ -0.65
SS18-212ENST00000579061 DNASE2O00115 360 aaPredicted RBP10.99□□□□□ -0.65
SS18-212ENST00000579061 HNRNPCP07910 306 aaKnown RBP eCLIP10.99□□□□□ -0.65
SS18-212ENST00000579061 RD3LP0DJH9 198 aa10.99□□□□□ -0.65
SS18-212ENST00000579061 IAPPP10997 89 aa10.99□□□□□ -0.65
SS18-212ENST00000579061 P2RY1P47900 373 aa10.99□□□□□ -0.65
SS18-212ENST00000579061 TFPI2P48307 235 aa10.99□□□□□ -0.65
SS18-212ENST00000579061 EIF2B2P49770 351 aaKnown RBP10.99□□□□□ -0.65
SS18-212ENST00000579061 GBGT1Q8N5D6 347 aa10.99□□□□□ -0.65
SS18-212ENST00000579061 SLC35E1Q96K37 410 aa10.99□□□□□ -0.65
SS18-212ENST00000579061 OVOL2Q9BRP0 275 aa10.99□□□□□ -0.65
SS18-212ENST00000579061 CCDC32Q9BV29 185 aa10.99□□□□□ -0.65
SS18-212ENST00000579061 MAP6D1Q9H9H5 199 aa10.99□□□□□ -0.65
SS18-212ENST00000579061 IGHV3-66A0A0C4DH42 116 aa10.98□□□□□ -0.65
SS18-212ENST00000579061 PLA2G10O15496 165 aa10.98□□□□□ -0.65
SS18-212ENST00000579061 LYRM1O43325 122 aa10.98□□□□□ -0.65
SS18-212ENST00000579061 IFNA21P01568 189 aa10.98□□□□□ -0.65
SS18-212ENST00000579061 RPL11P62913 178 aaKnown RBP10.98□□□□□ -0.65
SS18-212ENST00000579061 ID3Q02535 119 aa10.98□□□□□ -0.65
SS18-212ENST00000579061 GAMTQ14353 236 aa10.98□□□□□ -0.65
SS18-212ENST00000579061 WFDC3Q8IUB2 231 aa10.98□□□□□ -0.65
SS18-212ENST00000579061 IL17DQ8TAD2 202 aa10.98□□□□□ -0.65
SS18-212ENST00000579061 HELTA6NFD8 242 aa10.97□□□□□ -0.65
SS18-212ENST00000579061 ADAP1O75689 374 aa10.97□□□□□ -0.65
SS18-212ENST00000579061 IL4P05112 153 aa10.97□□□□□ -0.65
SS18-212ENST00000579061 FABP1P07148 127 aa10.97□□□□□ -0.65
SS18-212ENST00000579061 PSG1P11464 419 aa10.97□□□□□ -0.65
SS18-212ENST00000579061 ANXA7P20073 488 aaKnown RBP10.97□□□□□ -0.65
SS18-212ENST00000579061 AP2S1P53680 142 aaPredicted RBP10.97□□□□□ -0.65
SS18-212ENST00000579061 C4orf46Q504U0 113 aa10.97□□□□□ -0.65
SS18-212ENST00000579061 C16orf54Q6UWD8 224 aa10.97□□□□□ -0.65
SS18-212ENST00000579061 APRG1Q8IVJ8 170 aa10.97□□□□□ -0.65
SS18-212ENST00000579061 STPG3Q8N7X2 389 aa10.97□□□□□ -0.65
SS18-212ENST00000579061 OR51G1Q8NGK1 321 aa10.97□□□□□ -0.65
SS18-212ENST00000579061 IGKV1D-37A0A075B6S9 117 aa10.96□□□□□ -0.65
SS18-212ENST00000579061 ZFP92A6NM28 416 aa10.96□□□□□ -0.65
SS18-212ENST00000579061 K7EQG2 157 aa10.96□□□□□ -0.65
SS18-212ENST00000579061 WRBO00258 174 aa10.96□□□□□ -0.65
SS18-212ENST00000579061 NUP62P37198 522 aaPredicted RBP10.96□□□□□ -0.65
SS18-212ENST00000579061 USF2Q15853 346 aaPredicted RBP10.96□□□□□ -0.65
SS18-212ENST00000579061 GLMPQ8WWB7 406 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms