RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 PRSS54Q6PEW0 395 aa14.65□□□□□ -0.06
SS18-209ENST00000578595 CIB3Q96Q77 187 aaPredicted RBP14.65□□□□□ -0.06
SS18-209ENST00000578595 RHPN1-AS1Q9BWJ2 59 aa14.65□□□□□ -0.06
SS18-209ENST00000578595 U3KQK5 164 aa14.65□□□□□ -0.06
SS18-209ENST00000578595 IGHV3-66A0A0C4DH42 116 aa14.64□□□□□ -0.07
SS18-209ENST00000578595 SYNGR2O43760 224 aa14.64□□□□□ -0.07
SS18-209ENST00000578595 OR10J1P30954 320 aa14.64□□□□□ -0.07
SS18-209ENST00000578595 RPP30P78346 268 aaKnown RBP14.64□□□□□ -0.07
SS18-209ENST00000578595 ENKURQ8TC29 256 aa14.64□□□□□ -0.07
SS18-209ENST00000578595 NPIPB3Q92617 1050 aa14.64□□□□□ -0.07
SS18-209ENST00000578595 NARS2Q96I59 477 aaKnown RBP14.64□□□□□ -0.07
SS18-209ENST00000578595 SLC35E1Q96K37 410 aa14.64□□□□□ -0.07
SS18-209ENST00000578595 OR10C1Q96KK4 312 aa14.64□□□□□ -0.07
SS18-209ENST00000578595 ZMAT4Q9H898 229 aa14.64□□□□□ -0.07
SS18-209ENST00000578595 SRD5A3Q9H8P0 318 aa14.64□□□□□ -0.07
SS18-209ENST00000578595 DNAH9Q9NYC9 4486 aa14.64□□□□□ -0.07
SS18-209ENST00000578595 MPTX1A8MV57 137 aa14.63□□□□□ -0.07
SS18-209ENST00000578595 H3BP45 60 aa14.63□□□□□ -0.07
SS18-209ENST00000578595 H2AFB2P0C5Z0 115 aa14.63□□□□□ -0.07
SS18-209ENST00000578595 TFPI2P48307 235 aa14.63□□□□□ -0.07
SS18-209ENST00000578595 OR1S2Q8NGQ3 325 aa14.63□□□□□ -0.07
SS18-209ENST00000578595 RNF2Q99496 336 aa14.63□□□□□ -0.07
SS18-209ENST00000578595 SPAG8Q99932 426 aaPredicted RBP14.63□□□□□ -0.07
SS18-209ENST00000578595 ZFAND3Q9H8U3 227 aa14.63□□□□□ -0.07
SS18-209ENST00000578595 UBQLN2Q9UHD9 624 aa14.63□□□□□ -0.07
SS18-209ENST00000578595 CHEK1O14757 476 aa14.62□□□□□ -0.07
SS18-209ENST00000578595 IGLC1P0CG04 106 aa14.62□□□□□ -0.07
SS18-209ENST00000578595 NKX2-1P43699 371 aaPredicted RBP14.62□□□□□ -0.07
SS18-209ENST00000578595 RPL11P62913 178 aaKnown RBP14.62□□□□□ -0.07
SS18-209ENST00000578595 SPANXN5Q5MJ07 72 aa14.62□□□□□ -0.07
SS18-209ENST00000578595 Q8WTZ3 238 aa14.62□□□□□ -0.07
SS18-209ENST00000578595 ST8SIA2Q92186 375 aa14.62□□□□□ -0.07
SS18-209ENST00000578595 ZNF414Q96IQ9 312 aa14.62□□□□□ -0.07
SS18-209ENST00000578595 METTL26Q96S19 204 aa14.62□□□□□ -0.07
SS18-209ENST00000578595 SEC22CQ9BRL7 303 aa14.62□□□□□ -0.07
SS18-209ENST00000578595 C19orf73Q9NVV2 129 aa14.62□□□□□ -0.07
SS18-209ENST00000578595 GSKIPQ9P0R6 139 aa14.62□□□□□ -0.07
SS18-209ENST00000578595 TBC1D24Q9ULP9 559 aa14.62□□□□□ -0.07
SS18-209ENST00000578595 OR4C46A6NHA9 309 aa14.61□□□□□ -0.07
SS18-209ENST00000578595 FAM25EA8MYX2 175 aa14.61□□□□□ -0.07
SS18-209ENST00000578595 CCSO14618 274 aa14.61□□□□□ -0.07
SS18-209ENST00000578595 TSPAN4O14817 238 aa14.61□□□□□ -0.07
SS18-209ENST00000578595 SSSCA1O60232 199 aa14.61□□□□□ -0.07
SS18-209ENST00000578595 UPK1BO75841 260 aa14.61□□□□□ -0.07
SS18-209ENST00000578595 IGKV1-17P01599 117 aa14.61□□□□□ -0.07
SS18-209ENST00000578595 NPPCP23582 126 aa14.61□□□□□ -0.07
SS18-209ENST00000578595 ATP5IP56385 69 aaPredicted RBP14.61□□□□□ -0.07
SS18-209ENST00000578595 ASAH1Q13510 395 aa14.61□□□□□ -0.07
SS18-209ENST00000578595 IAH1Q2TAA2 248 aaPredicted RBP14.61□□□□□ -0.07
SS18-209ENST00000578595 TCF24Q7RTU0 167 aa14.61□□□□□ -0.07
SS18-209ENST00000578595 MITD1Q8WV92 249 aa14.61□□□□□ -0.07
SS18-209ENST00000578595 TMEM231Q9H6L2 316 aa14.61□□□□□ -0.07
SS18-209ENST00000578595 ZFP92A6NM28 416 aa14.6□□□□□ -0.07
SS18-209ENST00000578595 A8MZ25 164 aa14.6□□□□□ -0.07
SS18-209ENST00000578595 POLR2GP62487 172 aaKnown RBP eCLIP14.6□□□□□ -0.07
SS18-209ENST00000578595 GBGT1Q8N5D6 347 aa14.6□□□□□ -0.07
SS18-209ENST00000578595 RCHY1Q96PM5 261 aa14.6□□□□□ -0.07
SS18-209ENST00000578595 STAB2Q8WWQ8 2551 aa14.6□□□□□ -0.07
SS18-209ENST00000578595 APOHP02749 345 aaPredicted RBP14.59□□□□□ -0.07
SS18-209ENST00000578595 IL4P05112 153 aa14.59□□□□□ -0.07
SS18-209ENST00000578595 WFDC3Q8IUB2 231 aa14.59□□□□□ -0.07
SS18-209ENST00000578595 ZNF431Q8TF32 576 aaPredicted RBP14.59□□□□□ -0.07
SS18-209ENST00000578595 STRAPQ9Y3F4 350 aaKnown RBP14.59□□□□□ -0.07
SS18-209ENST00000578595 A0A1W2PS18 150 aa14.58□□□□□ -0.08
SS18-209ENST00000578595 C5orf51A6NDU8 294 aa14.58□□□□□ -0.08
SS18-209ENST00000578595 YPEL3P61236 119 aaPredicted RBP14.58□□□□□ -0.08
SS18-209ENST00000578595 PAFAH1B2P68402 229 aa14.58□□□□□ -0.08
SS18-209ENST00000578595 ZBTB8BQ8NAP8 495 aaPredicted RBP14.58□□□□□ -0.08
SS18-209ENST00000578595 OR4D5Q8NGN0 318 aa14.58□□□□□ -0.08
SS18-209ENST00000578595 GRAMD2BQ96HH9 432 aa14.58□□□□□ -0.08
SS18-209ENST00000578595 PBDC1Q9BVG4 233 aa14.58□□□□□ -0.08
SS18-209ENST00000578595 PSENENQ9NZ42 101 aa14.58□□□□□ -0.08
SS18-209ENST00000578595 TENM3Q9P273 2699 aa14.57□□□□□ -0.08
SS18-209ENST00000578595 SMCO3A2RU48 225 aa14.57□□□□□ -0.08
SS18-209ENST00000578595 DNASE2O00115 360 aaPredicted RBP14.57□□□□□ -0.08
SS18-209ENST00000578595 DFFBO76075 338 aa14.57□□□□□ -0.08
SS18-209ENST00000578595 RD3LP0DJH9 198 aa14.57□□□□□ -0.08
SS18-209ENST00000578595 GPX4P36969 197 aaPredicted RBP14.57□□□□□ -0.08
SS18-209ENST00000578595 GAMTQ14353 236 aa14.57□□□□□ -0.08
SS18-209ENST00000578595 HAGHQ16775 308 aa14.57□□□□□ -0.08
SS18-209ENST00000578595 C12orf45Q8N5I9 185 aaPredicted RBP14.57□□□□□ -0.08
SS18-209ENST00000578595 SPATA25Q9BR10 227 aa14.57□□□□□ -0.08
SS18-209ENST00000578595 RABAC1Q9UI14 185 aa14.57□□□□□ -0.08
SS18-209ENST00000578595 TOMM40O96008 361 aa14.56□□□□□ -0.08
SS18-209ENST00000578595 FABP1P07148 127 aa14.56□□□□□ -0.08
SS18-209ENST00000578595 HNRNPCP07910 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
SS18-209ENST00000578595 P2RY1P47900 373 aa14.56□□□□□ -0.08
SS18-209ENST00000578595 DEFA1P59665 94 aa14.56□□□□□ -0.08
SS18-209ENST00000578595 DEFA3P59666 94 aa14.56□□□□□ -0.08
SS18-209ENST00000578595 AKR1C1Q04828 323 aa14.56□□□□□ -0.08
SS18-209ENST00000578595 OR8G2PQ6IF36 304 aa14.56□□□□□ -0.08
SS18-209ENST00000578595 WWC2-AS2Q96NR7 200 aa14.56□□□□□ -0.08
SS18-209ENST00000578595 VSIRQ9H7M9 311 aa14.56□□□□□ -0.08
SS18-209ENST00000578595 CD5P06127 495 aa14.55□□□□□ -0.08
SS18-209ENST00000578595 PSG1P11464 419 aa14.55□□□□□ -0.08
SS18-209ENST00000578595 ID3Q02535 119 aa14.55□□□□□ -0.08
SS18-209ENST00000578595 STXBP6Q8NFX7 210 aa14.55□□□□□ -0.08
SS18-209ENST00000578595 LSM5Q9Y4Y9 91 aaKnown RBP14.55□□□□□ -0.08
SS18-209ENST00000578595 RBMY1BA6NDE4 496 aaKnown RBP14.54□□□□□ -0.08
SS18-209ENST00000578595 RBMY1EA6NEQ0 496 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms