RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SLC16A13Q7RTY0 426 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 NDUFA11Q86Y39 141 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 OR1S2Q8NGQ3 325 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 OR5C1Q8NGR4 320 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 MRAPQ8TCY5 172 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 C4orf3Q8WVX3 66 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 BSCL2Q96G97 398 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 CCDC140Q96MF4 163 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 MRPL36Q9P0J6 103 aaKnown RBP8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 WDR83OSQ9Y284 106 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 TENM2Q9NT68 2774 aa8.58□□□□□ -1.04
CDK5RAP3-204ENST00000577664 IGKV1D-37A0A075B6S9 117 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 IGKV1OR2-108A0A075B7D4 117 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 TCRBV4S1A1TA0A5B7 111 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 ARPC5O15511 151 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 MPDU1O75352 247 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 HSPB1P04792 205 aaKnown RBP8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 LGALS1P09382 135 aaKnown RBP8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 IGLC1P0CG04 106 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 CXCL2P19875 107 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 YPEL3P61236 119 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 SAMD5Q5TGI4 173 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 LAMTOR1Q6IAA8 161 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 LCNL1Q6ZST4 164 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 TMEM217Q8N7C4 229 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 NPIPB3Q92617 1050 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 TRGV9Q99603 122 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 ATP5SQ99766 215 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 CITED2Q99967 270 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 TMEM147Q9BVK8 224 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 UQCC1Q9NVA1 299 aa8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 PEF1Q9UBV8 284 aaKnown RBP8.57□□□□□ -1.04
CDK5RAP3-204ENST00000577664 IGKV1-17P01599 117 aa8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 AP2S1P53680 142 aaPredicted RBP8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 FHL3Q13643 280 aa8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 ZNF266Q14584 549 aa8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 TEPPQ6URK8 271 aa8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 GPHB5Q86YW7 130 aa8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 UBAC2Q8NBM4 344 aa8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 ZNF414Q96IQ9 312 aa8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 SLC35E1Q96K37 410 aa8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 ARV1Q9H2C2 271 aa8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 GNB4Q9HAV0 340 aa8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 WFDC1Q9HC57 220 aa8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 CYTL1Q9NRR1 136 aa8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 PAIP2BQ9ULR5 123 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-204ENST00000577664 PCLOQ9Y6V0 5065 aa8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 G3V4G9 280 aa8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 TGOLN2O43493 480 aa8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 JTBO76095 146 aa8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 CFDP00746 253 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 PRB2P02812 416 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 ADMP35318 185 aa8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 EIF2B2P49770 351 aaKnown RBP8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 RND2P52198 227 aa8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 ACSM6Q6P461 480 aa8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 CLEC19AQ6UXS0 136 aa8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 TMUB2Q71RG4 321 aa8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 C9orf62Q8N4C0 152 aa8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 WDR61Q9GZS3 305 aaKnown RBP8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 FBXL17Q9UF56 701 aa8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 HERC2O95714 4834 aa8.55□□□□□ -1.04
CDK5RAP3-204ENST00000577664 IGHV3-21A0A0B4J1V1 117 aa8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 BMPR1BO00238 502 aa8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 NUPL2O15504 423 aaKnown RBP8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 GNG7O60262 68 aa8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 GGCTO75223 188 aaKnown RBP8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 SCGB2A1O75556 95 aa8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 IGHV3-48P01763 117 aa8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 OR10J1P30954 320 aa8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 RPL29P47914 159 aaKnown RBP8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 PLP1P60201 277 aa8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 SELENOTP62341 195 aa8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 LILRB2Q8N423 598 aa8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 ARPC5LQ9BPX5 153 aa8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 CHRDL1Q9BU40 450 aa8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 SLC45A2Q9UMX9 530 aa8.54□□□□□ -1.04
CDK5RAP3-204ENST00000577664 RYR1P21817 5038 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 OR2T8A6NH00 312 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 LGALS9O00182 355 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 NDUFA4O00483 81 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 BCL2L11O43521 198 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 OR2C1O95371 312 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 TOMM40O96008 361 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 TRBV12-3P01733 135 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 IGHV3-11P01762 117 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 FABP1P07148 127 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 ZP3P21754 424 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 MYCNOSP40205 109 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 PRR20EP86478 221 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 PRR20CP86479 221 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 PRR20DP86480 221 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 PRR20BP86481 221 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 PRR20AP86496 221 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 DEFA5Q01523 94 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 RELQ04864 619 aaPredicted RBP8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 RAB31Q13636 194 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 KLF5Q13887 457 aaPredicted RBP8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 Q56UQ5 140 aa8.53□□□□□ -1.04
CDK5RAP3-204ENST00000577664 C18orf65Q6ZTR6 163 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms