RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 RIIAD1A6NNX1 92 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 SMKR1H3BMG3 65 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 H3BRM9 83 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 XKRYO14609 159 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 MRPS12O15235 138 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 GSTZ1O43708 216 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 NDUFB6O95139 128 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 EPPINO95925 133 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 IGHG2P01859 326 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 ATP5G1P05496 136 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 SEC11BP0C7V7 166 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 CCL1P22362 96 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 PSMB9P28065 219 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 PFN2P35080 140 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF93P35789 620 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 SRP14P37108 136 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 CCR2P41597 374 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 ATP5G3P48201 142 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 MARCKSL1P49006 195 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 GFERP55789 205 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 FBXW4P57775 412 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 PRDX1Q06830 199 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 LAGE3Q14657 143 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 Q499Y3 187 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 SPATA45Q537H7 98 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 LCN15Q6UWW0 184 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 C10orf111Q8N326 155 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 C3orf22Q8N5N4 141 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF709Q8N972 641 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 NUP35Q8NFH5 326 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 AMELYQ99218 206 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 GPR21Q99679 349 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 C20orf78Q9BR46 151 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 EMC6Q9BV81 110 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF471Q9BX82 626 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 PBOV1Q9GZY1 135 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 ST20Q9HBF5 79 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 MPC1Q9Y5U8 109 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 ADGRB3O60242 1522 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 DOCK3Q8IZD9 2030 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 A2ML1A8K2U0 1454 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 LRRC9Q6ZRR7 1453 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 KNDC1Q76NI1 1749 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 TRPM3Q9HCF6 1732 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 PLXNC1O60486 1568 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 GLI2P10070 1586 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 DOCK9Q9BZ29 2069 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 ADAMTSL3P82987 1691 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 ITSN2Q9NZM3 1697 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 PTPRKQ15262 1439 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 EDC4Q6P2E9 1401 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 GPR179Q6PRD1 2367 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 IGLV2-18A0A075B6J9 118 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 TRBV20-1A0A075B6N2 111 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 TRBV24-1A0A075B6N3 115 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 CCL15-CCL14A0A0B4J2E2 113 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 A0A0J9YW62 118 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF860A6NHJ4 632 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 BBIP1A8MTZ0 92 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF727A8MUV8 499 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 C8orf87E5RJ46 101 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 TMEM262E9PQX1 116 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 F8W1H4 67 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 M0R1X1 148 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 CCL21O00585 134 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 SOCS1O15524 211 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 CA2P00918 260 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 BCL2P10415 239 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 CRISP2P16562 243 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 PSMB8P28062 276 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 RND2P52198 227 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 POLR2JP52435 117 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 C1QTNF8P60827 252 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 PPP1CAP62136 330 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 RPL18AQ02543 176 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 IL15RAQ13261 267 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 C1DQ13901 141 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 IGFBP7Q16270 282 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 C12orf74Q32Q52 190 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 UBE2NLQ5JXB2 153 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 FKBP1CQ5VVH2 108 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 MRPL54Q6P161 138 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF880Q6PDB4 577 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 TCF23Q7RTU1 214 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF571Q7Z3V5 609 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 MRPL55Q7Z7F7 128 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 PCP2Q8IVA1 136 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 C6orf223Q8N319 242 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 C3orf56Q8N813 242 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 VSTM2AQ8TAG5 236 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 FGF14Q92915 247 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 MS4A6EQ96DS6 147 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 SLC25A44Q96H78 314 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 FAM19A4Q96LR4 140 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 IGF2BP2-AS1Q96M15 143 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 TMEM191AQ9H0A3 160 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 RERGLQ9H628 205 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 C16orf95Q9H693 158 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 OTORQ9NRC9 128 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 KCNIP2Q9NS61 270 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms