RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 GOLT1AQ6ZVE7 132 aa1.16□□□□□ -2.22
CDC27-219ENST00000576484 S100A7AQ86SG5 101 aa1.16□□□□□ -2.22
CDC27-219ENST00000576484 OR4E2Q8NGC2 313 aa1.16□□□□□ -2.22
CDC27-219ENST00000576484 PHB2Q99623 299 aa1.16□□□□□ -2.22
CDC27-219ENST00000576484 TMEM133Q9H2Q1 129 aa1.16□□□□□ -2.22
CDC27-219ENST00000576484 OPTCQ9UBM4 332 aa1.16□□□□□ -2.22
CDC27-219ENST00000576484 EPDR1Q9UM22 224 aa1.16□□□□□ -2.22
CDC27-219ENST00000576484 GLI3P10071 1580 aa1.16□□□□□ -2.22
CDC27-219ENST00000576484 FREM1Q5H8C1 2179 aa1.15□□□□□ -2.22
CDC27-219ENST00000576484 TRBV19A0A075B6N1 114 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 A0A087X0T9 212 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 TRAV4A0A0B4J268 109 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 OR4E1P0C645 316 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 FKBP2P26885 142 aaKnown RBP1.15□□□□□ -2.23
CDC27-219ENST00000576484 CDK5R1Q15078 307 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 TAF1AQ15573 450 aaPredicted RBP1.15□□□□□ -2.23
CDC27-219ENST00000576484 SPANXN5Q5MJ07 72 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 LYRM7Q5U5X0 104 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 LINC00471Q8N535 108 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 CDC26Q8NHZ8 85 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 CEP19Q96LK0 163 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 NHP2Q9NX24 153 aaKnown RBP1.15□□□□□ -2.23
CDC27-219ENST00000576484 IL20Q9NYY1 176 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 BAZ2BQ9UIF8 2168 aaKnown RBP1.15□□□□□ -2.23
CDC27-219ENST00000576484 DOCK3Q8IZD9 2030 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 FMN1Q68DA7 1419 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 SETD5Q9C0A6 1442 aa1.15□□□□□ -2.23
CDC27-219ENST00000576484 STRCQ7RTU9 1775 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 IGKV3-7A0A075B6H7 116 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 IGKV1D-42A0A075B6H8 117 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 CYB5BO43169 146 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 C1QBP02746 253 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 MIFP14174 115 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 SPI1P17947 270 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 SERPINB9P50453 376 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 HACD4Q5VWC8 232 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 OR8D4Q8NGM9 314 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 WFDC5Q8TCV5 224 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 FAM172AQ8WUF8 416 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 ADAT3Q96EY9 351 aaPredicted RBP1.14□□□□□ -2.23
CDC27-219ENST00000576484 ADAT1Q9BUB4 502 aaKnown RBP1.14□□□□□ -2.23
CDC27-219ENST00000576484 CCDC94Q9BW85 323 aaPredicted RBP1.14□□□□□ -2.23
CDC27-219ENST00000576484 MED9Q9NWA0 146 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 TAS2R4Q9NYW5 299 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 STOML2Q9UJZ1 356 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 CAMSAP1Q5T5Y3 1602 aa1.14□□□□□ -2.23
CDC27-219ENST00000576484 EIF3AQ14152 1382 aaKnown RBP1.13□□□□□ -2.23
CDC27-219ENST00000576484 IGKV1-9A0A0C4DH69 117 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 C7orf71A4D174 169 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 TMEM212A6NML5 194 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 CLDN25C9JDP6 229 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 OR2T1O43869 369 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 BAALC-AS2P0C853 105 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 SRIP30626 198 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 PIGPP57054 158 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 DEFA3P59666 94 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 TSNQ15631 228 aaKnown RBP1.13□□□□□ -2.23
CDC27-219ENST00000576484 RRN3P1Q2M238 152 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 PHF13Q86YI8 300 aaPredicted RBP1.13□□□□□ -2.23
CDC27-219ENST00000576484 OR13D1Q8NGV5 346 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 SERPINI1Q99574 410 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 HIST1H2BLQ99880 126 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 SLC50A1Q9BRV3 221 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 IMUPQ9GZP8 106 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 OR5AC2Q9NZP5 309 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 PYCARDQ9ULZ3 195 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 MYH11P35749 1972 aa1.13□□□□□ -2.23
CDC27-219ENST00000576484 MED1Q15648 1581 aaPredicted RBP1.13□□□□□ -2.23
CDC27-219ENST00000576484 ZNF106Q9H2Y7 1883 aaKnown RBP1.12□□□□□ -2.23
CDC27-219ENST00000576484 C1orf196B1AJZ1 125 aa1.12□□□□□ -2.23
CDC27-219ENST00000576484 IFNA7P01567 189 aa1.12□□□□□ -2.23
CDC27-219ENST00000576484 ATP5G3P48201 142 aa1.12□□□□□ -2.23
CDC27-219ENST00000576484 KRR1Q13601 381 aaKnown RBP1.12□□□□□ -2.23
CDC27-219ENST00000576484 C10orf55Q5SWW7 151 aa1.12□□□□□ -2.23
CDC27-219ENST00000576484 TMED4Q7Z7H5 227 aa1.12□□□□□ -2.23
CDC27-219ENST00000576484 Q8N2B8 174 aa1.12□□□□□ -2.23
CDC27-219ENST00000576484 AQP3Q92482 292 aa1.12□□□□□ -2.23
CDC27-219ENST00000576484 AP3S1Q92572 193 aa1.12□□□□□ -2.23
CDC27-219ENST00000576484 RP1P56715 2156 aa1.11□□□□□ -2.23
CDC27-219ENST00000576484 HMGB3O15347 200 aaKnown RBP1.11□□□□□ -2.23
CDC27-219ENST00000576484 RNASE3P12724 160 aaKnown RBP1.11□□□□□ -2.23
CDC27-219ENST00000576484 RNASE4P34096 147 aaKnown RBP1.11□□□□□ -2.23
CDC27-219ENST00000576484 EIF5AP63241 154 aaKnown RBP1.11□□□□□ -2.23
CDC27-219ENST00000576484 RPL19P84098 196 aaKnown RBP1.11□□□□□ -2.23
CDC27-219ENST00000576484 PDE6HQ13956 83 aa1.11□□□□□ -2.23
CDC27-219ENST00000576484 SURF2Q15527 256 aaPredicted RBP1.11□□□□□ -2.23
CDC27-219ENST00000576484 C12orf29Q8N999 325 aa1.11□□□□□ -2.23
CDC27-219ENST00000576484 SLAMF6Q96DU3 332 aa1.11□□□□□ -2.23
CDC27-219ENST00000576484 HS3ST2Q9Y278 367 aa1.11□□□□□ -2.23
CDC27-219ENST00000576484 SLC35A3Q9Y2D2 325 aa1.11□□□□□ -2.23
CDC27-219ENST00000576484 CCDC88AQ3V6T2 1871 aa1.11□□□□□ -2.23
CDC27-219ENST00000576484 SCN10AQ9Y5Y9 1956 aa1.1□□□□□ -2.23
CDC27-219ENST00000576484 TRAV14DV4A0A0A6YYC5 116 aa1.1□□□□□ -2.23
CDC27-219ENST00000576484 TRAV1-1A0A0B4J248 108 aa1.1□□□□□ -2.23
CDC27-219ENST00000576484 SULT1B1O43704 296 aa1.1□□□□□ -2.23
CDC27-219ENST00000576484 UBL3O95164 117 aa1.1□□□□□ -2.23
CDC27-219ENST00000576484 ASAH2BP0C7U1 165 aa1.1□□□□□ -2.23
CDC27-219ENST00000576484 SRP14P37108 136 aaKnown RBP1.1□□□□□ -2.23
CDC27-219ENST00000576484 RHOBP62745 196 aa1.1□□□□□ -2.23
CDC27-219ENST00000576484 POU6F1Q14863 301 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms