RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 TRAV25A0A0B4J276 109 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 IGHV3-35A0A0C4DH35 117 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 ZFP92A6NM28 416 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 FNDC10F2Z333 226 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 H3BP45 60 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 CFDP00746 253 aaPredicted RBP7.26□□□□□ -1.25
CCDC40-214ENST00000575431 CD5P06127 495 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 PET100P0DJ07 73 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 OR10J1P30954 320 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 PAX9P55771 341 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 GAMTQ14353 236 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 OXA1LQ15070 435 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 DEFB114Q30KQ6 69 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 TM4SF20Q53R12 229 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 C11orf87Q6NUJ2 197 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 TOMM20LQ6UXN7 152 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 GGACTQ9BVM4 153 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 PFDN2Q9UHV9 154 aa7.26□□□□□ -1.25
CCDC40-214ENST00000575431 PUS1Q9Y606 427 aaKnown RBP eCLIP7.26□□□□□ -1.25
CCDC40-214ENST00000575431 TRAV14DV4A0A0A6YYC5 116 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 A0A1W2PS18 150 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 PMS2P5A8MQ11 134 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 PRSS46E5RG02 174 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 TOMM40O96008 361 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 IGKV1-17P01599 117 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 RD3LP0DJH9 198 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 NPPCP23582 126 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 BCAP31P51572 246 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 CAV2P51636 162 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 KRTAP10-11P60412 298 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 S100A10P60903 97 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 DLK1P80370 383 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 RAB32Q13637 225 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 TIGITQ495A1 244 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 LAMTOR1Q6IAA8 161 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 TMEM144Q7Z5S9 345 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 ASB13Q8WXK3 278 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 NARS2Q96I59 477 aaKnown RBP7.25□□□□□ -1.25
CCDC40-214ENST00000575431 MED28Q9H204 178 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 TMEM231Q9H6L2 316 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 NPVFQ9HCQ7 196 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 LYRM2Q9NU23 88 aaPredicted RBP7.25□□□□□ -1.25
CCDC40-214ENST00000575431 AURKAIP1Q9NWT8 199 aaPredicted RBP7.25□□□□□ -1.25
CCDC40-214ENST00000575431 MGAT4CQ9UBM8 478 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 SMPXQ9UHP9 88 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 ALG5Q9Y673 324 aa7.25□□□□□ -1.25
CCDC40-214ENST00000575431 IGHV7-4-1A0A0J9YVY3 117 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 E5RGE8 158 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 DEDDO75618 318 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 METTL15P1P0C7V9 234 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 GP9P14770 177 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 S100A7P31151 101 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 NUP62P37198 522 aaPredicted RBP7.24□□□□□ -1.25
CCDC40-214ENST00000575431 H2BFSP57053 126 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 AKR1C1Q04828 323 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 CD300EQ496F6 205 aaPredicted RBP7.24□□□□□ -1.25
CCDC40-214ENST00000575431 OR8G2PQ6IF36 304 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 ADAMTSL5Q6ZMM2 481 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 RBPMS2Q6ZRY4 209 aaKnown RBP7.24□□□□□ -1.25
CCDC40-214ENST00000575431 ACOT7LQ6ZUV0 252 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 STX12Q86Y82 276 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 THAP8Q8NA92 274 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 OR51G1Q8NGK1 321 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 GRAMD2BQ96HH9 432 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 METTL26Q96S19 204 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 TRGV9Q99603 122 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 RHPN1-AS1Q9BWJ2 59 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 SLC25A31Q9H0C2 315 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 C11orf1Q9H5F2 150 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 ZFAND3Q9H8U3 227 aa7.24□□□□□ -1.25
CCDC40-214ENST00000575431 MGAM2Q2M2H8 2515 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 SIX6O95475 246 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 PSG1P11464 419 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 S100A11P31949 105 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 P2RY1P47900 373 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 SULT1A1P50225 295 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 HBG1P69891 147 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 HBG2P69892 147 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 ATP6V1FQ16864 119 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 BTNL8Q6UX41 500 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 GTSCR1Q86UQ5 136 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 TMEM252Q8N6L7 170 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 PPP1R1CQ8WVI7 109 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 ZNF414Q96IQ9 312 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 MLXQ9UH92 298 aa7.23□□□□□ -1.25
CCDC40-214ENST00000575431 FAM24AA6NFZ4 105 aa7.22□□□□□ -1.25
CCDC40-214ENST00000575431 CHEK1O14757 476 aa7.22□□□□□ -1.25
CCDC40-214ENST00000575431 TSPAN4O14817 238 aa7.22□□□□□ -1.25
CCDC40-214ENST00000575431 MPC2O95563 127 aa7.22□□□□□ -1.25
CCDC40-214ENST00000575431 CRYBB3P26998 211 aa7.22□□□□□ -1.25
CCDC40-214ENST00000575431 EIF2B2P49770 351 aaKnown RBP7.22□□□□□ -1.25
CCDC40-214ENST00000575431 CMC4P56277 68 aaPredicted RBP7.22□□□□□ -1.25
CCDC40-214ENST00000575431 SELENOTP62341 195 aa7.22□□□□□ -1.25
CCDC40-214ENST00000575431 BAXQ07812 192 aa7.22□□□□□ -1.25
CCDC40-214ENST00000575431 FGL1Q08830 312 aa7.22□□□□□ -1.25
CCDC40-214ENST00000575431 RAB31Q13636 194 aa7.22□□□□□ -1.25
CCDC40-214ENST00000575431 TEPPQ6URK8 271 aa7.22□□□□□ -1.25
CCDC40-214ENST00000575431 S100A7AQ86SG5 101 aa7.22□□□□□ -1.25
CCDC40-214ENST00000575431 TMEM61Q8N0U2 210 aa7.22□□□□□ -1.25
CCDC40-214ENST00000575431 MRAPQ8TCY5 172 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms