RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 PAX9P55771 341 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 ID3Q02535 119 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 RELQ04864 619 aaPredicted RBP6.44□□□□□ -1.38
SMG6-216ENST00000575176 ASAH1Q13510 395 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 USF2Q15853 346 aaPredicted RBP6.44□□□□□ -1.38
SMG6-216ENST00000575176 ZNF600Q6ZNG1 722 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 SLC16A13Q7RTY0 426 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 FAM24BQ8N5W8 94 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 RCHY1Q96PM5 261 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 SPAG8Q99932 426 aaPredicted RBP6.44□□□□□ -1.38
SMG6-216ENST00000575176 PDCD10Q9BUL8 212 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 RHPN1-AS1Q9BWJ2 59 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 RETNQ9HD89 108 aa6.44□□□□□ -1.38
SMG6-216ENST00000575176 HEYLQ9NQ87 328 aaPredicted RBP6.44□□□□□ -1.38
SMG6-216ENST00000575176 GAR1Q9NY12 217 aaKnown RBP6.44□□□□□ -1.38
SMG6-216ENST00000575176 IGHV3OR16-13A0A075B7E8 117 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 IGHV3-74A0A0B4J1X5 117 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 CCNKO75909 580 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 TCRBP04435 133 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 HOXB5P09067 269 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 IAPPP10997 89 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 NPBWR1P48145 328 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 IL15RAQ13261 267 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 GAMTQ14353 236 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 ZNF124Q15973 351 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 DUSP18Q8NEJ0 188 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 C17orf77Q96MU5 243 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 FAM110AQ9BQ89 295 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 C20orf24Q9BUV8 137 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 MAGT1Q9H0U3 335 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 HIPK2Q9H2X6 1198 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 NUDT15Q9NV35 164 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 U3KQ87 197 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 VPS13DQ5THJ4 4388 aa6.43□□□□□ -1.38
SMG6-216ENST00000575176 OR11H12B2RN74 326 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 SYNGR2O43760 224 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 UPK1BO75841 260 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 SLC25A4P12235 298 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 SUB1P53999 127 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMG6-216ENST00000575176 YPEL3P61236 119 aaPredicted RBP6.42□□□□□ -1.38
SMG6-216ENST00000575176 GUCA2BQ16661 112 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 GTSCR1Q86UQ5 136 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 THAP8Q8NA92 274 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 OR1S2Q8NGQ3 325 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 OR1S1Q8NH92 325 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 DCANP1Q8TF63 244 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 GLMPQ8WWB7 406 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 NPIPB3Q92617 1050 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 WWC2-AS2Q96NR7 200 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 SEC22CQ9BRL7 303 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 SRD5A3Q9H8P0 318 aa6.42□□□□□ -1.38
SMG6-216ENST00000575176 H3BP45 60 aa6.41□□□□□ -1.38
SMG6-216ENST00000575176 CCSO14618 274 aa6.41□□□□□ -1.38
SMG6-216ENST00000575176 TOMM40O96008 361 aa6.41□□□□□ -1.38
SMG6-216ENST00000575176 OR10J1P30954 320 aa6.41□□□□□ -1.38
SMG6-216ENST00000575176 POLR2GP62487 172 aaKnown RBP eCLIP6.41□□□□□ -1.38
SMG6-216ENST00000575176 ZNF90Q03938 601 aa6.41□□□□□ -1.38
SMG6-216ENST00000575176 TMEM14EPQ6UXP3 125 aa6.41□□□□□ -1.38
SMG6-216ENST00000575176 TMEM182Q6ZP80 229 aaPredicted RBP6.41□□□□□ -1.38
SMG6-216ENST00000575176 ZBTB8BQ8NAP8 495 aaPredicted RBP6.41□□□□□ -1.38
SMG6-216ENST00000575176 MAP6D1Q9H9H5 199 aa6.41□□□□□ -1.38
SMG6-216ENST00000575176 ENY2Q9NPA8 101 aa6.41□□□□□ -1.38
SMG6-216ENST00000575176 CACFD1Q9UGQ2 172 aa6.41□□□□□ -1.38
SMG6-216ENST00000575176 UBQLN2Q9UHD9 624 aa6.41□□□□□ -1.38
SMG6-216ENST00000575176 DNAH6Q9C0G6 4158 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 TRAV6A0A075B6T7 132 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 TRAV14DV4A0A0A6YYC5 116 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 IGHV3-66A0A0C4DH42 116 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 RPS10-NUDT3A0A1W2PQS6 291 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 K7EQG2 157 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 DFFBO76075 338 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 IFNA10P01566 189 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 PSG1P11464 419 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 GPX4P36969 197 aaPredicted RBP6.4□□□□□ -1.38
SMG6-216ENST00000575176 ATP5IP56385 69 aaPredicted RBP6.4□□□□□ -1.38
SMG6-216ENST00000575176 ARL16Q0P5N6 197 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 C16orf54Q6UWD8 224 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 ACOT7LQ6ZUV0 252 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 ZNF431Q8TF32 576 aaPredicted RBP6.4□□□□□ -1.38
SMG6-216ENST00000575176 S100ZQ8WXG8 99 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 ACY3Q96HD9 319 aa6.4□□□□□ -1.38
SMG6-216ENST00000575176 KMT2AQ03164 3969 aa6.4□□□□□ -1.39
SMG6-216ENST00000575176 TRAV30A0A087WSZ9 112 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 TRAV2A0A0B4J234 112 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 PIGBOS1A0A0B4J2F0 54 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 WRBO00258 174 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 SOCS3O14543 225 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 BUB3O43684 328 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 SSSCA1O60232 199 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 YIF1AO95070 293 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 MBPP02686 304 aaPredicted RBP6.39□□□□□ -1.39
SMG6-216ENST00000575176 GIG44P09565 113 aaPredicted RBP6.39□□□□□ -1.39
SMG6-216ENST00000575176 P2RY1P47900 373 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 C4orf46Q504U0 113 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 TCF24Q7RTU0 167 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 NRARPQ7Z6K4 114 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 APRG1Q8IVJ8 170 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 COQ8AQ8NI60 647 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 TRGV9Q99603 122 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 SPATA25Q9BR10 227 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms