RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 FNDC10F2Z333 226 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 SAA2P0DJI9 122 aaPredicted RBP11.69□□□□□ -0.54
SMG6-215ENST00000574501 FAM173AQ9BQD7 235 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 TTTY12Q9BZ98 90 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 CXXC4Q9H2H0 198 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 IGHV3OR15-7A0A075B7D8 119 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 KLK10O43240 276 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 LYZL6O75951 148 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 NCR2O95944 276 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 SP9P0CG40 484 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 KIR2DS2P43631 304 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 ZNRF1Q8ND25 227 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 BLNKQ8WV28 456 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 RAB37Q96AX2 223 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 B4GALT7Q9UBV7 327 aa11.69□□□□□ -0.54
SMG6-215ENST00000574501 PSMB11A5LHX3 300 aa11.68□□□□□ -0.54
SMG6-215ENST00000574501 COX7A2P2O60397 106 aa11.68□□□□□ -0.54
SMG6-215ENST00000574501 CD46P15529 392 aa11.68□□□□□ -0.54
SMG6-215ENST00000574501 FABP6P51161 128 aa11.68□□□□□ -0.54
SMG6-215ENST00000574501 RPP21Q9H633 154 aaKnown RBP11.68□□□□□ -0.54
SMG6-215ENST00000574501 TIMM8AO60220 97 aaPredicted RBP11.68□□□□□ -0.54
SMG6-215ENST00000574501 OR5AL1P0C617 328 aa11.68□□□□□ -0.54
SMG6-215ENST00000574501 CT45A1Q5HYN5 189 aa11.68□□□□□ -0.54
SMG6-215ENST00000574501 RNFT1Q5M7Z0 435 aa11.68□□□□□ -0.54
SMG6-215ENST00000574501 BHLHA15Q7RTS1 189 aaPredicted RBP11.68□□□□□ -0.54
SMG6-215ENST00000574501 TMEM116Q8NCL8 245 aa11.68□□□□□ -0.54
SMG6-215ENST00000574501 CT45A3Q8NHU0 189 aa11.68□□□□□ -0.54
SMG6-215ENST00000574501 MRPL32Q9BYC8 188 aaKnown RBP11.68□□□□□ -0.54
SMG6-215ENST00000574501 PCSK5Q92824 1860 aa11.68□□□□□ -0.54
SMG6-215ENST00000574501 DYSFO75923 2080 aa11.68□□□□□ -0.54
SMG6-215ENST00000574501 SMG1Q96Q15 3661 aaKnown RBP11.67□□□□□ -0.54
SMG6-215ENST00000574501 C9orf118A6NHY6 69 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 CHEK1O14757 476 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 AGFG2O95081 481 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 MOSP00540 346 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 SEC11AP67812 179 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 PRCDQ00LT1 54 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 LINC01545Q5VT33 79 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 HSPB8Q9UJY1 196 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 IGKV1D-17A0A075B6S4 117 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 TEX50A0A1B0GTY4 177 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 SRRM4A7MD48 611 aaKnown RBP11.67□□□□□ -0.54
SMG6-215ENST00000574501 IGKV1-16P04430 117 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 SLC25A5P05141 298 aaKnown RBP11.67□□□□□ -0.54
SMG6-215ENST00000574501 PATE2Q6UY27 113 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 RABAC1Q9UI14 185 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 ARFGEF3Q5TH69 2177 aa11.67□□□□□ -0.54
SMG6-215ENST00000574501 SPENQ96T58 3664 aaKnown RBP11.67□□□□□ -0.54
SMG6-215ENST00000574501 GNG7O60262 68 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 P01737 135 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 CD69Q07108 199 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 TMEM177Q53S58 311 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 C10orf113Q5VZT2 155 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 TMEM186Q96B77 213 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 FXYD5Q96DB9 178 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 PRNDQ9UKY0 176 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 DCHS1Q96JQ0 3298 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 PCNX2A6NKB5 2137 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 PGPA6NDG6 321 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 A8MWL6 223 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 K7EP34 96 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 RNASE2P10153 161 aaKnown RBP11.66□□□□□ -0.54
SMG6-215ENST00000574501 LGALS7P47929 136 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 GUSBP1Q15486 140 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 OR10AG1Q8NH19 301 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 CALYQ9NYX4 217 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 EPDR1Q9UM22 224 aa11.66□□□□□ -0.54
SMG6-215ENST00000574501 CFAP47Q6ZTR5 3102 aa11.65□□□□□ -0.54
SMG6-215ENST00000574501 A0A0G2JLM5 398 aa11.65□□□□□ -0.54
SMG6-215ENST00000574501 H3BTX0 84 aa11.65□□□□□ -0.54
SMG6-215ENST00000574501 J3QW42 95 aa11.65□□□□□ -0.54
SMG6-215ENST00000574501 KIR3DS1Q14943 382 aa11.65□□□□□ -0.54
SMG6-215ENST00000574501 OR2K2Q8NGT1 345 aa11.65□□□□□ -0.54
SMG6-215ENST00000574501 H3BRM9 83 aa11.65□□□□□ -0.55
SMG6-215ENST00000574501 C2orf83Q53S99 150 aa11.65□□□□□ -0.55
SMG6-215ENST00000574501 NEGR1Q7Z3B1 354 aa11.65□□□□□ -0.55
SMG6-215ENST00000574501 OR4A5Q8NH83 315 aa11.65□□□□□ -0.55
SMG6-215ENST00000574501 NEU4Q8WWR8 484 aaPredicted RBP11.65□□□□□ -0.55
SMG6-215ENST00000574501 GPR82Q96P67 336 aa11.65□□□□□ -0.55
SMG6-215ENST00000574501 NDFIP1Q9BT67 221 aa11.65□□□□□ -0.55
SMG6-215ENST00000574501 ZNRD1Q9P1U0 126 aa11.65□□□□□ -0.55
SMG6-215ENST00000574501 ZNF257Q9Y2Q1 563 aa11.65□□□□□ -0.55
SMG6-215ENST00000574501 F2RL2O00254 374 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 UPK2O00526 184 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 IGHV1-2P23083 117 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 RBPJQ06330 500 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 ABI3Q9P2A4 366 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 AHCTF1Q8WYP5 2266 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 TTC28Q96AY4 2481 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 A6NDN8 102 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 APOHP02749 345 aaPredicted RBP11.64□□□□□ -0.55
SMG6-215ENST00000574501 FGF6P10767 208 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 SAMD13Q5VXD3 122 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 RBPMS2Q6ZRY4 209 aaKnown RBP11.64□□□□□ -0.55
SMG6-215ENST00000574501 S100A7AQ86SG5 101 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 PDPNQ86YL7 162 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 PRSS22Q9GZN4 317 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 DEFB127Q9H1M4 99 aa11.64□□□□□ -0.55
SMG6-215ENST00000574501 MGST3O14880 152 aa11.63□□□□□ -0.55
SMG6-215ENST00000574501 LINC00305Q7Z4B0 112 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms