RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 H3BP45 60 aa13.06□□□□□ -0.32
CLDN7-207ENST00000574070 K7EMT4 169 aa13.06□□□□□ -0.32
CLDN7-207ENST00000574070 TOMM20LQ6UXN7 152 aa13.06□□□□□ -0.32
CLDN7-207ENST00000574070 RBPMS2Q6ZRY4 209 aaKnown RBP13.06□□□□□ -0.32
CLDN7-207ENST00000574070 OR1S2Q8NGQ3 325 aa13.06□□□□□ -0.32
CLDN7-207ENST00000574070 NPIPB3Q92617 1050 aa13.06□□□□□ -0.32
CLDN7-207ENST00000574070 GINS3Q9BRX5 216 aa13.06□□□□□ -0.32
CLDN7-207ENST00000574070 PSENENQ9NZ42 101 aa13.06□□□□□ -0.32
CLDN7-207ENST00000574070 MLXQ9UH92 298 aa13.06□□□□□ -0.32
CLDN7-207ENST00000574070 STRAPQ9Y3F4 350 aaKnown RBP13.06□□□□□ -0.32
CLDN7-207ENST00000574070 SMAD5-AS1Q9Y6J3 95 aa13.06□□□□□ -0.32
CLDN7-207ENST00000574070 TRAV14DV4A0A0A6YYC5 116 aa13.05□□□□□ -0.32
CLDN7-207ENST00000574070 PRAF2O60831 178 aa13.05□□□□□ -0.32
CLDN7-207ENST00000574070 C8orf88P0DMB2 117 aa13.05□□□□□ -0.32
CLDN7-207ENST00000574070 OR10J1P30954 320 aa13.05□□□□□ -0.32
CLDN7-207ENST00000574070 GSG1LQ6UXU4 331 aa13.05□□□□□ -0.32
CLDN7-207ENST00000574070 GTSCR1Q86UQ5 136 aa13.05□□□□□ -0.32
CLDN7-207ENST00000574070 IGHV3-49A0A0A0MS15 119 aa13.04□□□□□ -0.32
CLDN7-207ENST00000574070 SCAF4O95104 1147 aaKnown RBP13.04□□□□□ -0.32
CLDN7-207ENST00000574070 GPX4P36969 197 aaPredicted RBP13.04□□□□□ -0.32
CLDN7-207ENST00000574070 TMEM116Q8NCL8 245 aa13.04□□□□□ -0.32
CLDN7-207ENST00000574070 Q8WTZ3 238 aa13.04□□□□□ -0.32
CLDN7-207ENST00000574070 WDR89Q96FK6 387 aaPredicted RBP13.04□□□□□ -0.32
CLDN7-207ENST00000574070 LSM5Q9Y4Y9 91 aaKnown RBP13.04□□□□□ -0.32
CLDN7-207ENST00000574070 LSM4Q9Y4Z0 139 aaKnown RBP13.04□□□□□ -0.32
CLDN7-207ENST00000574070 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
CLDN7-207ENST00000574070 L7N2F9 121 aa13.03□□□□□ -0.32
CLDN7-207ENST00000574070 IGLC1P0CG04 106 aa13.03□□□□□ -0.32
CLDN7-207ENST00000574070 VAMP2P63027 116 aa13.03□□□□□ -0.32
CLDN7-207ENST00000574070 LAMTOR1Q6IAA8 161 aa13.03□□□□□ -0.32
CLDN7-207ENST00000574070 TMEM61Q8N0U2 210 aa13.03□□□□□ -0.32
CLDN7-207ENST00000574070 C2orf50Q96LR7 162 aa13.03□□□□□ -0.32
CLDN7-207ENST00000574070 RAB40CQ96S21 281 aa13.03□□□□□ -0.32
CLDN7-207ENST00000574070 RCL1Q9Y2P8 373 aaKnown RBP13.03□□□□□ -0.32
CLDN7-207ENST00000574070 SORL1Q92673 2214 aa13.03□□□□□ -0.32
CLDN7-207ENST00000574070 IGHV3OR16-13A0A075B7E8 117 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 IGHV3-74A0A0B4J1X5 117 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 ZFP92A6NM28 416 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 SNRPGP15A8MWD9 76 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 IGKV1-17P01599 117 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 MBPP02686 304 aaPredicted RBP13.02□□□□□ -0.33
CLDN7-207ENST00000574070 BMI1P35226 326 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 CD81P60033 236 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 ZNF414Q96IQ9 312 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 SMIM8Q96KF7 97 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 MARVELD1Q9BSK0 173 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 RHPN1-AS1Q9BWJ2 59 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 ZFAND3Q9H8U3 227 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 SMPXQ9UHP9 88 aa13.02□□□□□ -0.33
CLDN7-207ENST00000574070 TRAV25A0A0B4J276 109 aa13.01□□□□□ -0.33
CLDN7-207ENST00000574070 ZNF785A8K8V0 405 aa13.01□□□□□ -0.33
CLDN7-207ENST00000574070 GOSR2O14653 212 aa13.01□□□□□ -0.33
CLDN7-207ENST00000574070 S100A10P60903 97 aa13.01□□□□□ -0.33
CLDN7-207ENST00000574070 GAMTQ14353 236 aa13.01□□□□□ -0.33
CLDN7-207ENST00000574070 OR8G2PQ6IF36 304 aa13.01□□□□□ -0.33
CLDN7-207ENST00000574070 METTL26Q96S19 204 aa13.01□□□□□ -0.33
CLDN7-207ENST00000574070 IGHV3-66A0A0C4DH42 116 aa13□□□□□ -0.33
CLDN7-207ENST00000574070 SMCO3A2RU48 225 aa13□□□□□ -0.33
CLDN7-207ENST00000574070 CHEK1O14757 476 aa13□□□□□ -0.33
CLDN7-207ENST00000574070 SSNA1O43805 119 aa13□□□□□ -0.33
CLDN7-207ENST00000574070 NPPCP23582 126 aa13□□□□□ -0.33
CLDN7-207ENST00000574070 BCAP31P51572 246 aa13□□□□□ -0.33
CLDN7-207ENST00000574070 YPEL3P61236 119 aaPredicted RBP13□□□□□ -0.33
CLDN7-207ENST00000574070 AKR1C1Q04828 323 aa13□□□□□ -0.33
CLDN7-207ENST00000574070 NARS2Q96I59 477 aaKnown RBP13□□□□□ -0.33
CLDN7-207ENST00000574070 NEURL2Q9BR09 285 aa13□□□□□ -0.33
CLDN7-207ENST00000574070 COL7A1Q02388 2944 aa12.99□□□□□ -0.33
CLDN7-207ENST00000574070 K7EPK0 472 aa12.99□□□□□ -0.33
CLDN7-207ENST00000574070 TOMM40O96008 361 aa12.99□□□□□ -0.33
CLDN7-207ENST00000574070 METTL15P1P0C7V9 234 aa12.99□□□□□ -0.33
CLDN7-207ENST00000574070 RD3LP0DJH9 198 aa12.99□□□□□ -0.33
CLDN7-207ENST00000574070 PVALBP20472 110 aaPredicted RBP12.99□□□□□ -0.33
CLDN7-207ENST00000574070 PAX9P55771 341 aa12.99□□□□□ -0.33
CLDN7-207ENST00000574070 Q8N1Y9 231 aa12.99□□□□□ -0.33
CLDN7-207ENST00000574070 RNF2Q99496 336 aa12.99□□□□□ -0.33
CLDN7-207ENST00000574070 B9D2Q9BPU9 175 aa12.99□□□□□ -0.33
CLDN7-207ENST00000574070 TMEM231Q9H6L2 316 aa12.99□□□□□ -0.33
CLDN7-207ENST00000574070 TUBA4BQ9H853 241 aa12.99□□□□□ -0.33
CLDN7-207ENST00000574070 IGKV3-7A0A075B6H7 116 aa12.98□□□□□ -0.33
CLDN7-207ENST00000574070 A0A1W2PS18 150 aa12.98□□□□□ -0.33
CLDN7-207ENST00000574070 TSC22D2O75157 780 aa12.98□□□□□ -0.33
CLDN7-207ENST00000574070 SIX6O95475 246 aa12.98□□□□□ -0.33
CLDN7-207ENST00000574070 PTTG1O95997 202 aa12.98□□□□□ -0.33
CLDN7-207ENST00000574070 IL4P05112 153 aa12.98□□□□□ -0.33
CLDN7-207ENST00000574070 FABP1P07148 127 aa12.98□□□□□ -0.33
CLDN7-207ENST00000574070 CD7P09564 240 aa12.98□□□□□ -0.33
CLDN7-207ENST00000574070 TAS2R30P59541 319 aa12.98□□□□□ -0.33
CLDN7-207ENST00000574070 ACOT7LQ6ZUV0 252 aa12.98□□□□□ -0.33
CLDN7-207ENST00000574070 ST8SIA2Q92186 375 aa12.98□□□□□ -0.33
CLDN7-207ENST00000574070 C7orf66A4D0T2 115 aa12.97□□□□□ -0.33
CLDN7-207ENST00000574070 APOHP02749 345 aaPredicted RBP12.97□□□□□ -0.33
CLDN7-207ENST00000574070 IGHV4-30-4P0DP06 118 aa12.97□□□□□ -0.33
CLDN7-207ENST00000574070 PSG1P11464 419 aa12.97□□□□□ -0.33
CLDN7-207ENST00000574070 CAV2P51636 162 aa12.97□□□□□ -0.33
CLDN7-207ENST00000574070 RRAS2P62070 204 aaPredicted RBP12.97□□□□□ -0.33
CLDN7-207ENST00000574070 RPL11P62913 178 aaKnown RBP12.97□□□□□ -0.33
CLDN7-207ENST00000574070 RAB32Q13637 225 aa12.97□□□□□ -0.33
CLDN7-207ENST00000574070 TMEM14EPQ6UXP3 125 aa12.97□□□□□ -0.33
CLDN7-207ENST00000574070 TCF24Q7RTU0 167 aa12.97□□□□□ -0.33
CLDN7-207ENST00000574070 OR10P1Q8NGE3 313 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms