RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 RFPL4AA6NLU0 287 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 ODF3BA8MYP8 253 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 RFPL4AL1F8VTS6 287 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 C3orf84H3BNL1 204 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 M0R378 163 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 OR2T1O43869 369 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 GADD45GO95257 159 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 CTSGP08311 255 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 LGALS3P17931 250 aaKnown RBP1.15□□□□□ -2.23
CHD3-217ENST00000574022 RPL7P18124 248 aaKnown RBP1.15□□□□□ -2.23
CHD3-217ENST00000574022 RNASE4P34096 147 aaKnown RBP1.15□□□□□ -2.23
CHD3-217ENST00000574022 DYNLT3P51808 116 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 FXYD2P54710 66 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 TMEM258P61165 79 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 RHOGP84095 191 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 ZNF90Q03938 601 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 PLCXD2Q0VAA5 305 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 NDUFA5Q16718 116 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 CCDC153Q494R4 210 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 C22orf39Q6P5X5 142 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 Q8NDZ9 215 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 OR5A1Q8NGJ0 315 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 CANT1Q8WVQ1 401 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 ISOC1Q96CN7 298 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 MRPS24Q96EL2 167 aaKnown RBP1.15□□□□□ -2.23
CHD3-217ENST00000574022 BORCS8Q96FH0 119 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 PKMYT1Q99640 499 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 SLC25A21Q9BQT8 299 aaPredicted RBP1.15□□□□□ -2.23
CHD3-217ENST00000574022 TMEM138Q9NPI0 162 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 SPANXCQ9NY87 97 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 PSORS1C2Q9UIG4 136 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 JPT1Q9UK76 154 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 EPDR1Q9UM22 224 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 MED31Q9Y3C7 131 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 MYO16Q9Y6X6 1858 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 MYH11P35749 1972 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 PRR14LQ5THK1 2151 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 NOTCH3Q9UM47 2321 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 GREB1Q4ZG55 1949 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 RIMBP3CA6NJZ7 1639 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 RIMBP3BA6NNM3 1639 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 RIMBP3Q9UFD9 1639 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 SLIT2O94813 1529 aa1.15□□□□□ -2.23
CHD3-217ENST00000574022 GPR179Q6PRD1 2367 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 CPDO75976 1380 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 IGLV10-54A0A075B6I4 117 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 IGHV3-64A0A075B6Q5 118 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 IGHV1-18A0A0C4DH31 117 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 A0A0D9SG52 128 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 A0A1B0GVG6 124 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 A0A1W2PNN7 141 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 ODAMA1E959 279 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 C7orf71A4D174 169 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 ARRDC5A6NEK1 342 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 GABARAPH6UMI1 98 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 NDUFB3O43676 98 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 CST7O76096 145 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 BCL2P10415 239 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 COX6A1P12074 109 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 RPS3P23396 243 aaKnown RBP eCLIP1.14□□□□□ -2.23
CHD3-217ENST00000574022 S100A11P31949 105 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 KRTAP10-3P60369 221 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 ERHP84090 104 aaKnown RBP1.14□□□□□ -2.23
CHD3-217ENST00000574022 RELAQ04206 551 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 OR8B8Q15620 311 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 BRMS1LQ5PSV4 323 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 C1orf140Q5VVS0 124 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 HRCT1Q6UXD1 115 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 PRR15Q8IV56 129 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 WFDC11Q8NEX6 87 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 OR4E2Q8NGC2 313 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 OR4D11Q8NGI4 311 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 OR2T10Q8NGZ9 312 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 TVP23CQ96ET8 276 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 TEX37Q96LM6 180 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 ADAT1Q9BUB4 502 aaKnown RBP1.14□□□□□ -2.23
CHD3-217ENST00000574022 MRPL32Q9BYC8 188 aaKnown RBP1.14□□□□□ -2.23
CHD3-217ENST00000574022 YIPF3Q9GZM5 350 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 NDUFB11Q9NX14 153 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 RASL12Q9NYN1 266 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 TRAPPC2LQ9UL33 140 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 ZSWIM8A7E2V4 1837 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 BCL9O00512 1426 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 OBSL1O75147 1896 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 ANKRD31Q8N7Z5 1873 aa1.14□□□□□ -2.23
CHD3-217ENST00000574022 N4BP2Q86UW6 1770 aaPredicted RBP1.13□□□□□ -2.23
CHD3-217ENST00000574022 ZNF407Q9C0G0 2248 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 SCAF11Q99590 1463 aaKnown RBP1.13□□□□□ -2.23
CHD3-217ENST00000574022 CEP164Q9UPV0 1460 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 XIRP1Q702N8 1843 aaKnown RBP1.13□□□□□ -2.23
CHD3-217ENST00000574022 TRAV36DV7A0A075B6V5 113 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 A0A087WX48 190 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 TMSB15BA0A087X1C1 80 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 BORCS7-ASMTA0A0B4J1R7 106 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 MUC21A0A0G2JKD1 596 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 MUC21A0A140T8X8 626 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 A0A1B0GX51 115 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 OR51F1A6NGY5 319 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 HMSDA8MTL9 139 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 E7EQL1 145 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms