RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ZNF841Q6ZN19 808 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 ATOH7Q8N100 152 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 ZADH2Q8N4Q0 377 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 OR1L4Q8NGR5 311 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 TMEM167AQ8TBQ9 72 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 MRPL27Q9P0M9 148 aaKnown RBP15.38■□□□□ 0.05
SCARF1-206ENST00000573852 A0A1W2PN81 502 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 CORTO00230 105 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 PCP4P48539 62 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 TMEM200BQ69YZ2 307 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 LCN12Q6JVE5 192 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 C19orf35Q6ZS72 473 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 CLEC7AQ9BXN2 247 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 UQCR10Q9UDW1 63 aa15.38■□□□□ 0.05
SCARF1-206ENST00000573852 GPR6P46095 362 aaPredicted RBP15.37■□□□□ 0.05
SCARF1-206ENST00000573852 MAJINQ3KP22 176 aa15.37■□□□□ 0.05
SCARF1-206ENST00000573852 COL5A1-AS1Q5SY13 56 aa15.37■□□□□ 0.05
SCARF1-206ENST00000573852 C1orf185Q5T7R7 199 aa15.37■□□□□ 0.05
SCARF1-206ENST00000573852 RASL11AQ6T310 242 aa15.37■□□□□ 0.05
SCARF1-206ENST00000573852 PIP4P1Q86T03 277 aa15.37■□□□□ 0.05
SCARF1-206ENST00000573852 BORCS7Q96B45 105 aa15.37■□□□□ 0.05
SCARF1-206ENST00000573852 NKX6-3A6NJ46 265 aa15.37■□□□□ 0.05
SCARF1-206ENST00000573852 CEACAM4O75871 244 aa15.37■□□□□ 0.05
SCARF1-206ENST00000573852 RUSC1-AS1Q66K80 236 aa15.37■□□□□ 0.05
SCARF1-206ENST00000573852 LHFPL4Q7Z7J7 247 aa15.37■□□□□ 0.05
SCARF1-206ENST00000573852 SSBP4Q9BWG4 385 aaPredicted RBP15.37■□□□□ 0.05
SCARF1-206ENST00000573852 C7orf69Q9H7B7 122 aa15.37■□□□□ 0.05
SCARF1-206ENST00000573852 ROS1P08922 2347 aa15.37■□□□□ 0.05
SCARF1-206ENST00000573852 VWC2LB2RUY7 222 aa15.36■□□□□ 0.05
SCARF1-206ENST00000573852 OR4C13Q8NGP0 309 aa15.36■□□□□ 0.05
SCARF1-206ENST00000573852 SGK494Q96LW2 274 aa15.36■□□□□ 0.05
SCARF1-206ENST00000573852 IGLV2-23P01705 113 aa15.36■□□□□ 0.05
SCARF1-206ENST00000573852 MYCNOSP40205 109 aa15.36■□□□□ 0.05
SCARF1-206ENST00000573852 BPIFB3P59826 476 aa15.36■□□□□ 0.05
SCARF1-206ENST00000573852 MEF2CQ06413 473 aaPredicted RBP15.36■□□□□ 0.05
SCARF1-206ENST00000573852 PRR31Q5SQ13 230 aa15.36■□□□□ 0.05
SCARF1-206ENST00000573852 LINC00305Q7Z4B0 112 aa15.36■□□□□ 0.05
SCARF1-206ENST00000573852 THAP8Q8NA92 274 aa15.36■□□□□ 0.05
SCARF1-206ENST00000573852 Q6ZN92 141 aa15.35■□□□□ 0.05
SCARF1-206ENST00000573852 OR10X1Q8NGY0 326 aa15.35■□□□□ 0.05
SCARF1-206ENST00000573852 TXN2Q99757 166 aa15.35■□□□□ 0.05
SCARF1-206ENST00000573852 TPSG1Q9NRR2 321 aa15.35■□□□□ 0.05
SCARF1-206ENST00000573852 EP300Q09472 2414 aaPredicted RBP15.35■□□□□ 0.05
SCARF1-206ENST00000573852 HIGD1CA8MV81 97 aa15.35■□□□□ 0.05
SCARF1-206ENST00000573852 CAMPP49913 170 aa15.35■□□□□ 0.05
SCARF1-206ENST00000573852 RBMXL3Q8N7X1 1067 aaKnown RBP15.35■□□□□ 0.05
SCARF1-206ENST00000573852 STPG4Q8N801 248 aa15.35■□□□□ 0.05
SCARF1-206ENST00000573852 CBY1Q9Y3M2 126 aa15.35■□□□□ 0.05
SCARF1-206ENST00000573852 RITA1Q96K30 269 aa15.34■□□□□ 0.05
SCARF1-206ENST00000573852 ALKBH7Q9BT30 221 aaPredicted RBP15.34■□□□□ 0.05
SCARF1-206ENST00000573852 SUB1P53999 127 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCARF1-206ENST00000573852 KLF5Q13887 457 aaPredicted RBP15.34■□□□□ 0.05
SCARF1-206ENST00000573852 EBLN2Q6P2I7 272 aa15.34■□□□□ 0.05
SCARF1-206ENST00000573852 OR4A5Q8NH83 315 aa15.34■□□□□ 0.05
SCARF1-206ENST00000573852 VSTM2AQ8TAG5 236 aa15.34■□□□□ 0.05
SCARF1-206ENST00000573852 BLNKQ8WV28 456 aa15.34■□□□□ 0.05
SCARF1-206ENST00000573852 TNFRSF19Q9NS68 423 aa15.34■□□□□ 0.05
SCARF1-206ENST00000573852 EPDR1Q9UM22 224 aa15.34■□□□□ 0.05
SCARF1-206ENST00000573852 MGAQ8IWI9 3026 aa15.34■□□□□ 0.05
SCARF1-206ENST00000573852 CACNA1HO95180 2353 aa15.33■□□□□ 0.05
SCARF1-206ENST00000573852 C22orf46C9J442 243 aa15.33■□□□□ 0.05
SCARF1-206ENST00000573852 HSBP1O75506 76 aa15.33■□□□□ 0.05
SCARF1-206ENST00000573852 MOSP00540 346 aa15.33■□□□□ 0.05
SCARF1-206ENST00000573852 PDPNQ86YL7 162 aa15.33■□□□□ 0.05
SCARF1-206ENST00000573852 H1FXQ92522 213 aaKnown RBP15.33■□□□□ 0.05
SCARF1-206ENST00000573852 SAP30LQ9HAJ7 183 aa15.33■□□□□ 0.05
SCARF1-206ENST00000573852 CNOT1A5YKK6 2376 aaKnown RBP15.33■□□□□ 0.04
SCARF1-206ENST00000573852 A0A1W2PPI3 338 aa15.33■□□□□ 0.04
SCARF1-206ENST00000573852 SLC25A17O43808 307 aa15.33■□□□□ 0.04
SCARF1-206ENST00000573852 ORM2P19652 201 aa15.33■□□□□ 0.04
SCARF1-206ENST00000573852 HNRNPA3P51991 378 aaKnown RBP15.33■□□□□ 0.04
SCARF1-206ENST00000573852 CEP250Q9BV73 2442 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 FAM181BA6NEQ2 426 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 SLC25A5P05141 298 aaKnown RBP15.32■□□□□ 0.04
SCARF1-206ENST00000573852 HIST1H1EP10412 219 aaKnown RBP15.32■□□□□ 0.04
SCARF1-206ENST00000573852 TNFRSF1AP19438 455 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 DMRTA1Q5VZB9 504 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 NUP37Q8NFH4 326 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 ST6GALNAC6Q969X2 333 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 LAMTOR2Q9Y2Q5 125 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 DMXL1Q9Y485 3027 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 M0R2Z0 102 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 OR2J3O76001 311 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 CRYABP02511 175 aaKnown RBP15.32■□□□□ 0.04
SCARF1-206ENST00000573852 UBE2G1P62253 170 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 MRGPRG-AS1Q2M3A8 158 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 LYPD2Q6UXB3 125 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 ZFP30Q9Y2G7 519 aa15.32■□□□□ 0.04
SCARF1-206ENST00000573852 PGPA6NDG6 321 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 C17orf100A8MU93 164 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 LINC00614P0C842 121 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 RNASEKQ6P5S7 137 aaKnown RBP15.31■□□□□ 0.04
SCARF1-206ENST00000573852 LINC00322Q6ZN03 302 aaPredicted RBP15.31■□□□□ 0.04
SCARF1-206ENST00000573852 C11orf42Q8N5U0 333 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 RPH3ALQ9UNE2 315 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 SSUH2Q9Y2M2 353 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 WASHC3Q9Y3C0 194 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 A0A1B0GXF2 115 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 NDUFB8O95169 186 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 CEACAM8P31997 349 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms