RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 IGKCP01834 107 aa10.24□□□□□ -0.77
PCDHGA9-201ENST00000573521 SCGB1A1P11684 91 aa10.24□□□□□ -0.77
PCDHGA9-201ENST00000573521 F11RQ9Y624 299 aaKnown RBP10.24□□□□□ -0.77
PCDHGA9-201ENST00000573521 FAM181BA6NEQ2 426 aa10.24□□□□□ -0.77
PCDHGA9-201ENST00000573521 J3KRW8 73 aa10.24□□□□□ -0.77
PCDHGA9-201ENST00000573521 PFN1P07737 140 aaKnown RBP10.24□□□□□ -0.77
PCDHGA9-201ENST00000573521 TMEM170BQ5T4T1 132 aa10.24□□□□□ -0.77
PCDHGA9-201ENST00000573521 PEAR1Q5VY43 1037 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA9-201ENST00000573521 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 FAM231DQ6ZW35 169 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 WFDC3Q8IUB2 231 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 FAM19A2Q8N3H0 131 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 RP1P56715 2156 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 A0A0G2JMM0 328 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 A0A1W2PPB8 328 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 KIR3DP1A8MWS1 328 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 GFRA3O60609 400 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 TOMM40O96008 361 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 IGKV1D-33P01593 117 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 IGKV1-33P01594 117 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 TCRAP04437 139 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 ADCYAP1P18509 176 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 IGHV1-18A0A0C4DH31 117 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 CD5LO43866 347 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 PLNP26678 52 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 YPEL3P61236 119 aaPredicted RBP10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 MEIG1Q5JSS6 88 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 MGST2Q99735 147 aa10.23□□□□□ -0.77
PCDHGA9-201ENST00000573521 BOD1L2Q8IYS8 172 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 TRGV11A0A075B6L2 103 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 IGHG3P01860 377 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 CD55P08174 381 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 IFI27P40305 119 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 LYPD6BQ8NI32 183 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 COQ2Q96H96 371 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 SIGMAR1Q99720 223 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 DEPPQ9NTK1 212 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 A0A087WV48 116 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 E9PLN8 166 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 VKORC1Q9BQB6 163 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 CEP290O15078 2479 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 BSPH1Q075Z2 132 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 TSC2P49815 1807 aa10.22□□□□□ -0.77
PCDHGA9-201ENST00000573521 C15orf62A8K5M9 175 aa10.21□□□□□ -0.77
PCDHGA9-201ENST00000573521 M0R1W7 72 aa10.21□□□□□ -0.77
PCDHGA9-201ENST00000573521 CA1P00915 261 aaPredicted RBP10.21□□□□□ -0.77
PCDHGA9-201ENST00000573521 RNF224P0DH78 156 aa10.21□□□□□ -0.77
PCDHGA9-201ENST00000573521 C9orf139Q6ZV77 190 aa10.21□□□□□ -0.77
PCDHGA9-201ENST00000573521 VSIRQ9H7M9 311 aa10.21□□□□□ -0.77
PCDHGA9-201ENST00000573521 RALGAPA1Q6GYQ0 2036 aa10.21□□□□□ -0.77
PCDHGA9-201ENST00000573521 IGHV2-5P01817 119 aa10.21□□□□□ -0.77
PCDHGA9-201ENST00000573521 SSBP4Q9BWG4 385 aaPredicted RBP10.21□□□□□ -0.77
PCDHGA9-201ENST00000573521 PEMTQ9UBM1 199 aa10.21□□□□□ -0.77
PCDHGA9-201ENST00000573521 HOXA3O43365 443 aaPredicted RBP10.21□□□□□ -0.78
PCDHGA9-201ENST00000573521 B3GALT5-AS1P59052 145 aa10.21□□□□□ -0.78
PCDHGA9-201ENST00000573521 UBE2V1Q13404 147 aa10.21□□□□□ -0.78
PCDHGA9-201ENST00000573521 H3BUT2 72 aa10.21□□□□□ -0.78
PCDHGA9-201ENST00000573521 Q8NFD4 153 aa10.21□□□□□ -0.78
PCDHGA9-201ENST00000573521 C1orf147Q96MC9 270 aaPredicted RBP10.21□□□□□ -0.78
PCDHGA9-201ENST00000573521 DERL1Q9BUN8 251 aa10.21□□□□□ -0.78
PCDHGA9-201ENST00000573521 C9orf172C9J069 976 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 GZMBP10144 247 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 PLEKHB2Q96CS7 222 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 TET1Q8NFU7 2136 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 IGKV3-7A0A075B6H7 116 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 A8MWP6 167 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 IGHV1-46P01743 117 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 COX6B1P14854 86 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 DUX5Q96PT3 197 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 ALPK2Q86TB3 2170 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 THSD7BQ9C0I4 1608 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 SCN8AQ9UQD0 1980 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 C10orf126Q8N4M7 172 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 DCTN5Q9BTE1 182 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 CHTOPQ9Y3Y2 248 aaKnown RBP10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 CACNA1IQ9P0X4 2223 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 AHCTF1Q8WYP5 2266 aa10.2□□□□□ -0.78
PCDHGA9-201ENST00000573521 LOC102724200A0A096LPH7 203 aaPredicted RBP10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 RBMY1BA6NDE4 496 aaKnown RBP10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 RBMY1EA6NEQ0 496 aaKnown RBP10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 RBMY1DP0C7P1 496 aaKnown RBP10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 RBMY1A1P0DJD3 496 aaKnown RBP10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 RBMY1CP0DJD4 496 aa10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 FAM27E3Q08E93 113 aa10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 LAGE3Q14657 143 aa10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 ZNF585BQ52M93 769 aa10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 LINC00477Q96M19 166 aa10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 MBD3L4A6NDZ8 208 aaPredicted RBP10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 MBD3L3A6NE82 208 aaPredicted RBP10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 MBD3L5A6NJ08 208 aaPredicted RBP10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 TMEM238C9JI98 176 aa10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 IL15RAQ13261 267 aa10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 MDS2Q8NDY4 140 aa10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 MBD3L2Q8NHZ7 208 aaPredicted RBP10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 C11orf52Q96A22 123 aa10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 ZNF479Q96JC4 524 aa10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 OVOL2Q9BRP0 275 aa10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 SLC25A15Q9Y619 301 aa10.19□□□□□ -0.78
PCDHGA9-201ENST00000573521 A8MWV9 139 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms