RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 C12orf77C9JDV5 145 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 RPP21Q9H633 154 aaKnown RBP7.91□□□□□ -1.14
USP6-204ENST00000572949 LDLRAD4O15165 306 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 C15orf32Q32M92 178 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 RBBP6Q7Z6E9 1792 aaKnown RBP7.91□□□□□ -1.14
USP6-204ENST00000572949 GGACTQ9BVM4 153 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 PSME4Q14997 1843 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 ST6GALNAC3Q8NDV1 305 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 OTORQ9NRC9 128 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 IMMP1LQ96LU5 166 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 CITED2Q99967 270 aaPredicted RBP7.91□□□□□ -1.14
USP6-204ENST00000572949 TRAF4Q9BUZ4 470 aaPredicted RBP7.91□□□□□ -1.14
USP6-204ENST00000572949 IGLV1-36A0A0B4J1U3 117 aa7.9□□□□□ -1.14
USP6-204ENST00000572949 F12P00748 615 aaPredicted RBP7.9□□□□□ -1.14
USP6-204ENST00000572949 SAA2-SAA4A0A096LPE2 208 aa7.9□□□□□ -1.14
USP6-204ENST00000572949 RAMP1O60894 148 aa7.9□□□□□ -1.14
USP6-204ENST00000572949 SMIM6P0DI80 62 aa7.9□□□□□ -1.14
USP6-204ENST00000572949 SAA2P0DJI9 122 aaPredicted RBP7.9□□□□□ -1.14
USP6-204ENST00000572949 NPC2P61916 151 aa7.9□□□□□ -1.14
USP6-204ENST00000572949 MTURNQ8N3F0 131 aa7.9□□□□□ -1.14
USP6-204ENST00000572949 A0A1B0GWB2 263 aa7.9□□□□□ -1.14
USP6-204ENST00000572949 SPSB3Q6PJ21 355 aa7.9□□□□□ -1.14
USP6-204ENST00000572949 COQ2Q96H96 371 aa7.9□□□□□ -1.14
USP6-204ENST00000572949 CREBBPQ92793 2442 aa7.9□□□□□ -1.14
USP6-204ENST00000572949 GCM2O75603 506 aaPredicted RBP7.9□□□□□ -1.14
USP6-204ENST00000572949 ZNF329Q86UD4 541 aa7.9□□□□□ -1.14
USP6-204ENST00000572949 WDR81Q562E7 1941 aa7.9□□□□□ -1.15
USP6-204ENST00000572949 TRBV7-1A0A0A6YYK4 115 aa7.9□□□□□ -1.15
USP6-204ENST00000572949 C1QL1O75973 258 aa7.9□□□□□ -1.15
USP6-204ENST00000572949 IGHMP01871 453 aa7.9□□□□□ -1.15
USP6-204ENST00000572949 CTSBP07858 339 aa7.9□□□□□ -1.15
USP6-204ENST00000572949 EVI2AP22794 236 aa7.9□□□□□ -1.15
USP6-204ENST00000572949 MAPK1IP1LQ8NDC0 245 aa7.9□□□□□ -1.15
USP6-204ENST00000572949 TRAV8-2A0A0B4J237 113 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 PPIFP30405 207 aaKnown RBP7.89□□□□□ -1.15
USP6-204ENST00000572949 STPG2Q8N412 459 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 M0R2P5 195 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 ELF5Q9UKW6 265 aaPredicted RBP7.89□□□□□ -1.15
USP6-204ENST00000572949 KLRD1Q13241 179 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 THAP8Q8NA92 274 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 MRPS18CQ9Y3D5 142 aaKnown RBP7.89□□□□□ -1.15
USP6-204ENST00000572949 COL18A1P39060 1754 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 MINOS1Q5TGZ0 78 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 ASPHD2Q6ICH7 369 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 MINOS1-NBL1R4GNA1 71 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 FCN3O75636 299 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 ORMDL2Q53FV1 153 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 VWC2LB2RUY7 222 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 IL18BPO95998 194 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 LINC00614P0C842 121 aa7.89□□□□□ -1.15
USP6-204ENST00000572949 PARD6GQ9BYG4 376 aaPredicted RBP7.89□□□□□ -1.15
USP6-204ENST00000572949 C17orf98A8MV24 154 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 RBMY1FQ15415 496 aaKnown RBP7.88□□□□□ -1.15
USP6-204ENST00000572949 OR11H7Q8NGC8 314 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 USMG5Q96IX5 58 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 TMEM144Q7Z5S9 345 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 AMELYQ99218 206 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 SPRR3Q9UBC9 169 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 HIST1H4AP62805 103 aaKnown RBP7.88□□□□□ -1.15
USP6-204ENST00000572949 KLF12Q9Y4X4 402 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 ADAMTS7Q9UKP4 1686 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 MARF1Q9Y4F3 1742 aaKnown RBP7.88□□□□□ -1.15
USP6-204ENST00000572949 CCL1P22362 96 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 TIMP3P35625 211 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 ZNF876PQ49A33 203 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 C1orf159Q96HA4 380 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 SRRM4A7MD48 611 aaKnown RBP7.88□□□□□ -1.15
USP6-204ENST00000572949 GATA3P23771 443 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 SNHG12Q9BXW3 62 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 CHTOPQ9Y3Y2 248 aaKnown RBP7.88□□□□□ -1.15
USP6-204ENST00000572949 BRWD3Q6RI45 1802 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 A0A0G2JK05 382 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 SNAI2O43623 268 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 TNFRSF6BO95407 300 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 CBLN1P23435 193 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 IGHV1-18A0A0C4DH31 117 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 HIGD1CA8MV81 97 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 LGALS1P09382 135 aaKnown RBP7.88□□□□□ -1.15
USP6-204ENST00000572949 ZNF525Q8N782 197 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 ORAOV1Q8WV07 137 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 TNFRSF14Q92956 283 aa7.88□□□□□ -1.15
USP6-204ENST00000572949 TEX48A0A1B0GUV7 120 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 F2Z2F3 143 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 ERVH48-1M5A8F1 160 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 SFTA2Q6UW10 78 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 STRCP1A6NGW2 1772 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 IGHV2-26A0A0B4J1V2 119 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 YPEL1O60688 119 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 C2orf68Q2NKX9 166 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 YPEL2Q96QA6 119 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 PEF1Q9UBV8 284 aaKnown RBP7.87□□□□□ -1.15
USP6-204ENST00000572949 GATA2P23769 480 aaPredicted RBP7.87□□□□□ -1.15
USP6-204ENST00000572949 Q0VFX4 171 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 MBD3L4A6NDZ8 208 aaPredicted RBP7.87□□□□□ -1.15
USP6-204ENST00000572949 MBD3L3A6NE82 208 aaPredicted RBP7.87□□□□□ -1.15
USP6-204ENST00000572949 DPRXA6NFQ7 191 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 MBD3L5A6NJ08 208 aaPredicted RBP7.87□□□□□ -1.15
USP6-204ENST00000572949 FUT5Q11128 374 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 TMEM256Q8N2U0 113 aa7.87□□□□□ -1.15
USP6-204ENST00000572949 MBD3L2Q8NHZ7 208 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms