RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 PRB3Q04118 309 aaPredicted RBP13□□□□□ -0.33
POLR2A-201ENST00000572844 PYY3Q5JQD4 70 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 LDLRAD2Q5SZI1 272 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 KIR3DL3Q8N743 410 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 NPBQ8NG41 125 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 CFHR4Q92496 578 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 GSN-AS1Q9NRJ2 163 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 ABCA4P78363 2273 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 TIMM23O14925 209 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 IGHV3-48P01763 117 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 FABP1P07148 127 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 HNF1AP20823 631 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 FXYD5Q96DB9 178 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 IGF2BP2-AS1Q96M15 143 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 CDC42EP3Q9UKI2 254 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 TRAPPC1Q9Y5R8 145 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 V9GYV3 84 aa13□□□□□ -0.33
POLR2A-201ENST00000572844 XKRY2A2RUG3 117 aa12.99□□□□□ -0.33
POLR2A-201ENST00000572844 NDUFA3O95167 84 aa12.99□□□□□ -0.33
POLR2A-201ENST00000572844 ARF6P62330 175 aa12.99□□□□□ -0.33
POLR2A-201ENST00000572844 LINC00305Q7Z4B0 112 aa12.99□□□□□ -0.33
POLR2A-201ENST00000572844 HIST1H2BLQ99880 126 aa12.99□□□□□ -0.33
POLR2A-201ENST00000572844 ISLRO14498 428 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 IGLV2-8P01709 118 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 OR1L6Q8NGR2 347 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 ADGRG4Q8IZF6 3080 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 OOSP1A8MZH6 123 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 NBR2O15453 112 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 PYYP10082 97 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 MYCNOSP40205 109 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 CNN1P51911 297 aaKnown RBP12.98□□□□□ -0.33
POLR2A-201ENST00000572844 LGALS4P56470 323 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 ERVFC1-1P60608 527 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 RPEL1Q2QD12 228 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 RUSC1-AS1Q66K80 236 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 ZNF329Q86UD4 541 aa12.98□□□□□ -0.33
POLR2A-201ENST00000572844 I3L2K1 104 aa12.97□□□□□ -0.33
POLR2A-201ENST00000572844 FCN1O00602 326 aa12.97□□□□□ -0.33
POLR2A-201ENST00000572844 HYPMO75409 117 aa12.97□□□□□ -0.33
POLR2A-201ENST00000572844 MOSP00540 346 aa12.97□□□□□ -0.33
POLR2A-201ENST00000572844 FABP4P15090 132 aa12.97□□□□□ -0.33
POLR2A-201ENST00000572844 GPR6P46095 362 aaPredicted RBP12.97□□□□□ -0.33
POLR2A-201ENST00000572844 PLGLAQ15195 96 aa12.97□□□□□ -0.33
POLR2A-201ENST00000572844 PDZD11Q5EBL8 140 aa12.97□□□□□ -0.33
POLR2A-201ENST00000572844 DMRT1Q9Y5R6 373 aa12.97□□□□□ -0.33
POLR2A-201ENST00000572844 PACRGQ96M98 296 aaPredicted RBP12.97□□□□□ -0.33
POLR2A-201ENST00000572844 CACNA1AO00555 2505 aa12.96□□□□□ -0.33
POLR2A-201ENST00000572844 A6NNC1 897 aa12.96□□□□□ -0.33
POLR2A-201ENST00000572844 SLC17A3O00476 420 aa12.96□□□□□ -0.33
POLR2A-201ENST00000572844 RPL19P84098 196 aaKnown RBP12.96□□□□□ -0.33
POLR2A-201ENST00000572844 MMDQ15546 238 aa12.96□□□□□ -0.33
POLR2A-201ENST00000572844 OR1B1Q8NGR6 318 aa12.96□□□□□ -0.33
POLR2A-201ENST00000572844 ATRXP46100 2492 aa12.96□□□□□ -0.34
POLR2A-201ENST00000572844 TRBV9A0A0B4J1U6 114 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 PEX7O00628 323 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 IGLC1P0CG04 106 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 ORM2P19652 201 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 OR5I1Q13606 314 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 LY6DQ14210 128 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 CCDC144NLQ6NUI1 221 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 UNQ6494/PRO21346Q6UXR6 183 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 C19orf35Q6ZS72 473 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 TMEM190Q8WZ59 177 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 AMBPP02760 352 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 COX19Q49B96 90 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 MINOS1Q5TGZ0 78 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 WNT10AQ9GZT5 417 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 HILPDAQ9Y5L2 63 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 MINOS1-NBL1R4GNA1 71 aa12.95□□□□□ -0.34
POLR2A-201ENST00000572844 TPRP12270 2363 aaKnown RBP12.94□□□□□ -0.34
POLR2A-201ENST00000572844 ARHGAP32A7KAX9 2087 aa12.94□□□□□ -0.34
POLR2A-201ENST00000572844 A0A1W2PPR1 153 aa12.94□□□□□ -0.34
POLR2A-201ENST00000572844 CNIH1O95406 144 aa12.94□□□□□ -0.34
POLR2A-201ENST00000572844 APELAP0DMC3 54 aa12.94□□□□□ -0.34
POLR2A-201ENST00000572844 FAM231DQ6ZW35 169 aa12.94□□□□□ -0.34
POLR2A-201ENST00000572844 CTAG1AP78358 180 aa12.93□□□□□ -0.34
POLR2A-201ENST00000572844 KLRD1Q13241 179 aa12.93□□□□□ -0.34
POLR2A-201ENST00000572844 SMIM12Q96EX1 92 aa12.93□□□□□ -0.34
POLR2A-201ENST00000572844 SMG1Q96Q15 3661 aaKnown RBP12.93□□□□□ -0.34
POLR2A-201ENST00000572844 KALRNO60229 2985 aa12.93□□□□□ -0.34
POLR2A-201ENST00000572844 NBEAP1P0C6P0 100 aa12.93□□□□□ -0.34
POLR2A-201ENST00000572844 GP9P14770 177 aa12.93□□□□□ -0.34
POLR2A-201ENST00000572844 EBI3Q14213 229 aa12.93□□□□□ -0.34
POLR2A-201ENST00000572844 TMEM183BQ1AE95 376 aa12.93□□□□□ -0.34
POLR2A-201ENST00000572844 C5orf64Q2M2E5 130 aa12.93□□□□□ -0.34
POLR2A-201ENST00000572844 IBA57Q5T440 356 aaKnown RBP12.93□□□□□ -0.34
POLR2A-201ENST00000572844 LHFPL4Q7Z7J7 247 aa12.93□□□□□ -0.34
POLR2A-201ENST00000572844 ITLN2Q8WWU7 325 aaPredicted RBP12.93□□□□□ -0.34
POLR2A-201ENST00000572844 TMEM14CQ9P0S9 112 aa12.93□□□□□ -0.34
POLR2A-201ENST00000572844 HIGD1AQ9Y241 93 aa12.93□□□□□ -0.34
POLR2A-201ENST00000572844 SMIM27A0A1W2PRY6 76 aa12.92□□□□□ -0.34
POLR2A-201ENST00000572844 K7EIM0 57 aa12.92□□□□□ -0.34
POLR2A-201ENST00000572844 HIST1H1BP16401 226 aaKnown RBP12.92□□□□□ -0.34
POLR2A-201ENST00000572844 EFNA4P52798 201 aa12.92□□□□□ -0.34
POLR2A-201ENST00000572844 CX3CL1P78423 397 aa12.92□□□□□ -0.34
POLR2A-201ENST00000572844 FXYD3Q14802 87 aa12.92□□□□□ -0.34
POLR2A-201ENST00000572844 VMO1Q7Z5L0 202 aa12.92□□□□□ -0.34
POLR2A-201ENST00000572844 GNB1LQ9BYB4 327 aa12.92□□□□□ -0.34
POLR2A-201ENST00000572844 RNASE7Q9H1E1 156 aaKnown RBP12.92□□□□□ -0.34
POLR2A-201ENST00000572844 EPDR1Q9UM22 224 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms