RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.56□□□□□ -1.52
NUP88-205ENST00000572809 SCP2D1Q9UJQ7 156 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 KCNIP3Q9Y2W7 256 aa5.56□□□□□ -1.52
NUP88-205ENST00000572809 IGHV3OR16-8A0A075B7F1 116 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 TRAV14DV4A0A0A6YYC5 116 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 CRYM-AS1A6NIL9 109 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 C15orf62A8K5M9 175 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 TSPAN4O14817 238 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 ZNF207O43670 478 aaKnown RBP5.55□□□□□ -1.52
NUP88-205ENST00000572809 GNG7O60262 68 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 YIF1AO95070 293 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 TNFRSF6BO95407 300 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 TMEM50AO95807 157 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 LYL1P12980 280 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 NPBWR1P48145 328 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 CASC10Q5T4H9 136 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 PVRIGQ6DKI7 326 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 OR52E5Q8NH55 327 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 RBPMSQ93062 196 aaKnown RBP5.55□□□□□ -1.52
NUP88-205ENST00000572809 GPR146Q96CH1 333 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 HIPK2Q9H2X6 1198 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 EDA2RQ9HAV5 297 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 MCUBQ9NWR8 336 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 SMPXQ9UHP9 88 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 TMEM56-RWDD3S4R434 201 aa5.55□□□□□ -1.52
NUP88-205ENST00000572809 LOC102724200A0A096LPH7 203 aaPredicted RBP5.54□□□□□ -1.52
NUP88-205ENST00000572809 IGHV7-4-1A0A0J9YVY3 117 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 CORTO00230 105 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 CHEK1O14757 476 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 RNASE2P10153 161 aaKnown RBP5.54□□□□□ -1.52
NUP88-205ENST00000572809 AKR1C4P17516 323 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 S100A5P33763 92 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 HOXA1P49639 335 aaPredicted RBP5.54□□□□□ -1.52
NUP88-205ENST00000572809 SPCS3P61009 180 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 ICAM4Q14773 271 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 PYDC2Q56P42 97 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 TMEM268Q5VZI3 342 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 TMEM116Q8NCL8 245 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 LHFPL5Q8TAF8 219 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 GALNT14Q96FL9 552 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 ZNF414Q96IQ9 312 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 OR10C1Q96KK4 312 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 SPAG8Q99932 426 aaPredicted RBP5.54□□□□□ -1.52
NUP88-205ENST00000572809 RHPN1-AS1Q9BWJ2 59 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 STAB2Q8WWQ8 2551 aa5.54□□□□□ -1.52
NUP88-205ENST00000572809 TRGV11A0A075B6L2 103 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 OR4C46A6NHA9 309 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 FAUP35544 74 aaKnown RBP5.53□□□□□ -1.52
NUP88-205ENST00000572809 HTR2BP41595 481 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 CMC4P56277 68 aaPredicted RBP5.53□□□□□ -1.52
NUP88-205ENST00000572809 AP3S2P59780 193 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 TMEM187Q14656 261 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 AARDQ4LEZ3 155 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 TOMM20LQ6UXN7 152 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 ZNF600Q6ZNG1 722 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 TOMM5Q8N4H5 51 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 IL22RA2Q969J5 263 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 TMEM230Q96A57 120 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 RNF2Q99496 336 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 GINS3Q9BRX5 216 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 GGTLC1Q9BX51 225 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 FNDC4Q9H6D8 234 aaPredicted RBP5.53□□□□□ -1.52
NUP88-205ENST00000572809 RETNQ9HD89 108 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 CACNG5Q9UF02 275 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 CACFD1Q9UGQ2 172 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 UBQLN2Q9UHD9 624 aa5.53□□□□□ -1.52
NUP88-205ENST00000572809 IGHV3OR16-13A0A075B7E8 117 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 TRAV30A0A087WSZ9 112 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 IGHV3-49A0A0A0MS15 119 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 IGHV3-74A0A0B4J1X5 117 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 CEBPZOSA8MTT3 80 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 CLN5O75503 358 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 CD5P06127 495 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 SULT1A3P0DMM9 295 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 SULT1A4P0DMN0 295 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 ANXA3P12429 323 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 OPRK1P41145 380 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 CCR6P51684 374 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 SUPT4H1P63272 117 aaKnown RBP5.52□□□□□ -1.53
NUP88-205ENST00000572809 PAFAH1B2P68402 229 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 KLF9Q13886 244 aaPredicted RBP5.52□□□□□ -1.53
NUP88-205ENST00000572809 BSXQ3C1V8 233 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 C2orf83Q53S99 150 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 FAM90A2PQ658T7 463 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 ZFAND6Q6FIF0 208 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 LYZL2Q7Z4W2 148 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 CCDC190Q86UF4 302 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 LGI3Q8N145 548 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 OR4X1Q8NH49 305 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 FAM110AQ9BQ89 295 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 SEPSECSQ9HD40 501 aaKnown RBP5.52□□□□□ -1.53
NUP88-205ENST00000572809 PUS1Q9Y606 427 aaKnown RBP eCLIP5.52□□□□□ -1.53
NUP88-205ENST00000572809 V9GYH0 126 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 HUWE1Q7Z6Z7 4374 aaKnown RBP5.52□□□□□ -1.53
NUP88-205ENST00000572809 NBEAL2Q6ZNJ1 2754 aa5.52□□□□□ -1.53
NUP88-205ENST00000572809 IGKV3-7A0A075B6H7 116 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 A0A0B4J2A0 478 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 PIGBOS1A0A0B4J2F0 54 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 A0A1B0GU03 582 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 RPS10-NUDT3A0A1W2PQS6 291 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms