RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 OR10P1Q8NGE3 313 aa15.72■□□□□ 0.11
VPS53-210ENST00000571456 MARC2Q969Z3 335 aa15.72■□□□□ 0.11
VPS53-210ENST00000571456 GGACTQ9BVM4 153 aa15.72■□□□□ 0.11
VPS53-210ENST00000571456 LYRM2Q9NU23 88 aaPredicted RBP15.72■□□□□ 0.11
VPS53-210ENST00000571456 UFC1Q9Y3C8 167 aa15.72■□□□□ 0.11
VPS53-210ENST00000571456 E5RGE8 158 aa15.71■□□□□ 0.11
VPS53-210ENST00000571456 H3BP45 60 aa15.71■□□□□ 0.11
VPS53-210ENST00000571456 K7EIL1 84 aa15.71■□□□□ 0.11
VPS53-210ENST00000571456 FABP1P07148 127 aa15.71■□□□□ 0.11
VPS53-210ENST00000571456 ADMP35318 185 aa15.71■□□□□ 0.11
VPS53-210ENST00000571456 RND2P52198 227 aa15.71■□□□□ 0.11
VPS53-210ENST00000571456 ZNF600Q6ZNG1 722 aa15.71■□□□□ 0.11
VPS53-210ENST00000571456 PPP1R1CQ8WVI7 109 aa15.71■□□□□ 0.11
VPS53-210ENST00000571456 C11orf1Q9H5F2 150 aa15.71■□□□□ 0.11
VPS53-210ENST00000571456 DYNC2H1Q8NCM8 4307 aaKnown RBP15.7■□□□□ 0.1
VPS53-210ENST00000571456 PRSS46E5RG02 174 aa15.7■□□□□ 0.1
VPS53-210ENST00000571456 K7EMT4 169 aa15.7■□□□□ 0.1
VPS53-210ENST00000571456 BCAP31P51572 246 aa15.7■□□□□ 0.1
VPS53-210ENST00000571456 YPEL3P61236 119 aaPredicted RBP15.7■□□□□ 0.1
VPS53-210ENST00000571456 DLK1P80370 383 aa15.7■□□□□ 0.1
VPS53-210ENST00000571456 TMEM190Q8WZ59 177 aa15.7■□□□□ 0.1
VPS53-210ENST00000571456 CHRDL1Q9BU40 450 aa15.7■□□□□ 0.1
VPS53-210ENST00000571456 IGHV3-48P01763 117 aa15.69■□□□□ 0.1
VPS53-210ENST00000571456 IGLL1P15814 213 aa15.69■□□□□ 0.1
VPS53-210ENST00000571456 OR10J1P30954 320 aa15.69■□□□□ 0.1
VPS53-210ENST00000571456 P2RY1P47900 373 aa15.69■□□□□ 0.1
VPS53-210ENST00000571456 CAV2P51636 162 aa15.69■□□□□ 0.1
VPS53-210ENST00000571456 FGL1Q08830 312 aa15.69■□□□□ 0.1
VPS53-210ENST00000571456 GAMTQ14353 236 aa15.69■□□□□ 0.1
VPS53-210ENST00000571456 MLANAQ16655 118 aa15.69■□□□□ 0.1
VPS53-210ENST00000571456 STX12Q86Y82 276 aa15.69■□□□□ 0.1
VPS53-210ENST00000571456 GINS3Q9BRX5 216 aa15.69■□□□□ 0.1
VPS53-210ENST00000571456 SLC25A31Q9H0C2 315 aa15.69■□□□□ 0.1
VPS53-210ENST00000571456 ZNF320A2RRD8 509 aa15.68■□□□□ 0.1
VPS53-210ENST00000571456 PMS2P5A8MQ11 134 aa15.68■□□□□ 0.1
VPS53-210ENST00000571456 MPC2O95563 127 aa15.68■□□□□ 0.1
VPS53-210ENST00000571456 GIPP09681 153 aaPredicted RBP15.68■□□□□ 0.1
VPS53-210ENST00000571456 IGLC1P0CG04 106 aa15.68■□□□□ 0.1
VPS53-210ENST00000571456 HBG1P69891 147 aa15.68■□□□□ 0.1
VPS53-210ENST00000571456 HBG2P69892 147 aa15.68■□□□□ 0.1
VPS53-210ENST00000571456 FCN2Q15485 313 aa15.68■□□□□ 0.1
VPS53-210ENST00000571456 DEFB121Q5J5C9 76 aa15.68■□□□□ 0.1
VPS53-210ENST00000571456 NPIPB3Q92617 1050 aa15.68■□□□□ 0.1
VPS53-210ENST00000571456 ACY3Q96HD9 319 aa15.68■□□□□ 0.1
VPS53-210ENST00000571456 DAZ1Q9NQZ3 744 aaKnown RBP15.68■□□□□ 0.1
VPS53-210ENST00000571456 SAP30O75446 220 aa15.67■□□□□ 0.1
VPS53-210ENST00000571456 CFDP00746 253 aaPredicted RBP15.67■□□□□ 0.1
VPS53-210ENST00000571456 METTL15P1P0C7V9 234 aa15.67■□□□□ 0.1
VPS53-210ENST00000571456 CXCL3P19876 107 aa15.67■□□□□ 0.1
VPS53-210ENST00000571456 SULT1A1P50225 295 aa15.67■□□□□ 0.1
VPS53-210ENST00000571456 RAP2BP61225 183 aa15.67■□□□□ 0.1
VPS53-210ENST00000571456 OR8G2PQ6IF36 304 aa15.67■□□□□ 0.1
VPS53-210ENST00000571456 OR11H7Q8NGC8 314 aa15.67■□□□□ 0.1
VPS53-210ENST00000571456 OR2K2Q8NGT1 345 aa15.67■□□□□ 0.1
VPS53-210ENST00000571456 ZC4H2Q9NQZ6 224 aa15.67■□□□□ 0.1
VPS53-210ENST00000571456 MRPL36Q9P0J6 103 aaKnown RBP15.67■□□□□ 0.1
VPS53-210ENST00000571456 MRPL27Q9P0M9 148 aaKnown RBP15.67■□□□□ 0.1
VPS53-210ENST00000571456 STAB2Q8WWQ8 2551 aa15.67■□□□□ 0.1
VPS53-210ENST00000571456 IGKV1-17P01599 117 aa15.66■□□□□ 0.1
VPS53-210ENST00000571456 S100A11P31949 105 aa15.66■□□□□ 0.1
VPS53-210ENST00000571456 BMI1P35226 326 aa15.66■□□□□ 0.1
VPS53-210ENST00000571456 BAXQ07812 192 aa15.66■□□□□ 0.1
VPS53-210ENST00000571456 LRRC37A5PQ49AS3 106 aa15.66■□□□□ 0.1
VPS53-210ENST00000571456 ACOT7LQ6ZUV0 252 aa15.66■□□□□ 0.1
VPS53-210ENST00000571456 TMEM144Q7Z5S9 345 aa15.66■□□□□ 0.1
VPS53-210ENST00000571456 TMEM252Q8N6L7 170 aa15.66■□□□□ 0.1
VPS53-210ENST00000571456 THAP8Q8NA92 274 aa15.66■□□□□ 0.1
VPS53-210ENST00000571456 Q8WTZ3 238 aa15.66■□□□□ 0.1
VPS53-210ENST00000571456 TRGV9Q99603 122 aa15.66■□□□□ 0.1
VPS53-210ENST00000571456 NPVFQ9HCQ7 196 aa15.66■□□□□ 0.1
VPS53-210ENST00000571456 TECRQ9NZ01 308 aaKnown RBP15.66■□□□□ 0.1
VPS53-210ENST00000571456 C2orf70A6NJV1 201 aa15.65■□□□□ 0.1
VPS53-210ENST00000571456 ZFP92A6NM28 416 aa15.65■□□□□ 0.1
VPS53-210ENST00000571456 CSN3P07498 182 aa15.65■□□□□ 0.1
VPS53-210ENST00000571456 AKR1C1Q04828 323 aa15.65■□□□□ 0.1
VPS53-210ENST00000571456 ATP6V1FQ16864 119 aa15.65■□□□□ 0.1
VPS53-210ENST00000571456 THAP6Q8TBB0 222 aa15.65■□□□□ 0.1
VPS53-210ENST00000571456 SORL1Q92673 2214 aa15.64■□□□□ 0.09
VPS53-210ENST00000571456 SACSQ9NZJ4 4579 aa15.64■□□□□ 0.09
VPS53-210ENST00000571456 YIF1AO95070 293 aa15.64■□□□□ 0.09
VPS53-210ENST00000571456 TOMM40O96008 361 aa15.64■□□□□ 0.09
VPS53-210ENST00000571456 C8orf88P0DMB2 117 aa15.64■□□□□ 0.09
VPS53-210ENST00000571456 EGFEM1PQ0D2K5 195 aa15.64■□□□□ 0.09
VPS53-210ENST00000571456 IL34Q6ZMJ4 242 aa15.64■□□□□ 0.09
VPS53-210ENST00000571456 PUS1Q9Y606 427 aaKnown RBP eCLIP15.64■□□□□ 0.09
VPS53-210ENST00000571456 TMEM213A2RRL7 107 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 FAM24AA6NFZ4 105 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 IGLV1-51P01701 117 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 CD5P06127 495 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 RD3LP0DJH9 198 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 LYL1P12980 280 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 FOLR2P14207 255 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 CBLN1P23435 193 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 TIGITQ495A1 244 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 TOMM20LQ6UXN7 152 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 UNQ9165/PRO28630Q6UXU0 137 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 C20orf24Q9BUV8 137 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 PFDN2Q9UHV9 154 aa15.63■□□□□ 0.09
VPS53-210ENST00000571456 TRAV14DV4A0A0A6YYC5 116 aa15.62■□□□□ 0.09
VPS53-210ENST00000571456 IGHV3-35A0A0C4DH35 117 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms