RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 C17orf50Q8WW18 174 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 AJUBAQ96IF1 538 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 OR4F4Q96R69 305 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 TMUB1Q9BVT8 246 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 C7orf69Q9H7B7 122 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 TECRQ9NZ01 308 aaKnown RBP13.74□□□□□ -0.21
RPAIN-208ENST00000571043 ANK3Q12955 4377 aaKnown RBP13.74□□□□□ -0.21
RPAIN-208ENST00000571043 SONP18583 2426 aaKnown RBP13.74□□□□□ -0.21
RPAIN-208ENST00000571043 ZNF727A8MUV8 499 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 FAM106CPP0CH98 169 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 CD24P25063 80 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 RND2P52198 227 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 KRTAP1-1Q07627 177 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 FXYD3Q14802 87 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 ZNF562Q6V9R5 426 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 OR1L4Q8NGR5 311 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 TRGV9Q99603 122 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 SLC25A33Q9BSK2 321 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 MRPL32Q9BYC8 188 aaKnown RBP13.74□□□□□ -0.21
RPAIN-208ENST00000571043 ARL2-SNX15V9GYD0 113 aa13.74□□□□□ -0.21
RPAIN-208ENST00000571043 PSMB11A5LHX3 300 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 COLCA2A8K830 154 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 F6UZH7 168 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 FOSL1P15407 271 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 TMEM11P17152 192 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 CTRB1P17538 263 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 GATA2P23769 480 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-208ENST00000571043 BRS3P32247 399 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 TAS2R45P59539 299 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 CTRB2Q6GPI1 263 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 MIR17HGQ75NE6 70 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 SDF2L1Q9HCN8 221 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 C1RLQ9NZP8 487 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 MRPL36Q9P0J6 103 aaKnown RBP13.73□□□□□ -0.21
RPAIN-208ENST00000571043 TNCP24821 2201 aa13.73□□□□□ -0.21
RPAIN-208ENST00000571043 NPFFO15130 113 aa13.72□□□□□ -0.21
RPAIN-208ENST00000571043 CD5LO43866 347 aa13.72□□□□□ -0.21
RPAIN-208ENST00000571043 AVPP01185 164 aa13.72□□□□□ -0.21
RPAIN-208ENST00000571043 ATF4P18848 351 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-208ENST00000571043 SAA4P35542 130 aa13.72□□□□□ -0.21
RPAIN-208ENST00000571043 PQLC2Q6ZP29 291 aa13.72□□□□□ -0.21
RPAIN-208ENST00000571043 PFDN5Q99471 154 aa13.72□□□□□ -0.21
RPAIN-208ENST00000571043 SMIM7Q9BQ49 75 aa13.72□□□□□ -0.21
RPAIN-208ENST00000571043 WNT10AQ9GZT5 417 aa13.72□□□□□ -0.21
RPAIN-208ENST00000571043 DNAJC4Q9NNZ3 241 aa13.72□□□□□ -0.21
RPAIN-208ENST00000571043 TMEM167BQ9NRX6 74 aa13.72□□□□□ -0.21
RPAIN-208ENST00000571043 TNFRSF19Q9NS68 423 aa13.72□□□□□ -0.21
RPAIN-208ENST00000571043 NAT8Q9UHE5 227 aa13.72□□□□□ -0.21
RPAIN-208ENST00000571043 MAST4O15021 2626 aa13.71□□□□□ -0.21
RPAIN-208ENST00000571043 APELAP0DMC3 54 aa13.71□□□□□ -0.21
RPAIN-208ENST00000571043 CD99P14209 185 aa13.71□□□□□ -0.21
RPAIN-208ENST00000571043 FBLN7Q53RD9 439 aa13.71□□□□□ -0.21
RPAIN-208ENST00000571043 CST9LP1Q5W188 147 aa13.71□□□□□ -0.21
RPAIN-208ENST00000571043 TMEM37Q8WXS4 190 aa13.71□□□□□ -0.21
RPAIN-208ENST00000571043 PARLQ9H300 379 aa13.71□□□□□ -0.21
RPAIN-208ENST00000571043 DMRT1Q9Y5R6 373 aa13.71□□□□□ -0.21
RPAIN-208ENST00000571043 F8P00451 2351 aa13.71□□□□□ -0.22
RPAIN-208ENST00000571043 NAV3Q8IVL0 2385 aa13.71□□□□□ -0.22
RPAIN-208ENST00000571043 CENPVL3A0A0U1RRI6 287 aa13.7□□□□□ -0.22
RPAIN-208ENST00000571043 NCBP2LA6PVI3 153 aaKnown RBP13.7□□□□□ -0.22
RPAIN-208ENST00000571043 I3L2K1 104 aa13.7□□□□□ -0.22
RPAIN-208ENST00000571043 C8orf88P0DMB2 117 aa13.7□□□□□ -0.22
RPAIN-208ENST00000571043 ATP5G3P48201 142 aa13.7□□□□□ -0.22
RPAIN-208ENST00000571043 BPIFB3P59826 476 aa13.7□□□□□ -0.22
RPAIN-208ENST00000571043 UBE2G2P60604 165 aa13.7□□□□□ -0.22
RPAIN-208ENST00000571043 CX3CL1P78423 397 aa13.7□□□□□ -0.22
RPAIN-208ENST00000571043 TMEM241Q24JQ0 296 aa13.7□□□□□ -0.22
RPAIN-208ENST00000571043 C19orf35Q6ZS72 473 aa13.7□□□□□ -0.22
RPAIN-208ENST00000571043 CXorf65A6NEN9 183 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 NPIPB5A8MRT5 1133 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 COX7A2P2O60397 106 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 IGHV3-48P01763 117 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 ZNF90Q03938 601 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 ARPC1AQ92747 370 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 RPUSD4Q96CM3 377 aaKnown RBP13.69□□□□□ -0.22
RPAIN-208ENST00000571043 PRELID1Q9Y255 219 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 MXRA5Q9NR99 2828 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 ELOA3CA0A087WX78 387 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-208ENST00000571043 LOC105371267A0A1B0GV96 52 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 MT-ND4LP03901 98 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 ZNF674Q2M3X9 581 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 OR4X1Q8NH49 305 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 TMEM242Q9NWH2 141 aa13.69□□□□□ -0.22
RPAIN-208ENST00000571043 HIVEP2P31629 2446 aa13.68□□□□□ -0.22
RPAIN-208ENST00000571043 OR2C1O95371 312 aa13.68□□□□□ -0.22
RPAIN-208ENST00000571043 FOLR2P14207 255 aa13.68□□□□□ -0.22
RPAIN-208ENST00000571043 NPPCP23582 126 aa13.68□□□□□ -0.22
RPAIN-208ENST00000571043 C10orf113Q5VZT2 155 aa13.68□□□□□ -0.22
RPAIN-208ENST00000571043 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
RPAIN-208ENST00000571043 TTC9CQ8N5M4 171 aa13.68□□□□□ -0.22
RPAIN-208ENST00000571043 Q8N9W7 124 aa13.68□□□□□ -0.22
RPAIN-208ENST00000571043 HIST1H2BAQ96A08 127 aa13.68□□□□□ -0.22
RPAIN-208ENST00000571043 ZNF503Q96F45 646 aa13.68□□□□□ -0.22
RPAIN-208ENST00000571043 CTDSP1Q9GZU7 261 aa13.68□□□□□ -0.22
RPAIN-208ENST00000571043 YTHDF2Q9Y5A9 579 aaKnown RBP13.68□□□□□ -0.22
RPAIN-208ENST00000571043 IGHV1-69DA0A0B4J2H0 117 aa13.67□□□□□ -0.22
RPAIN-208ENST00000571043 IGHV1-69P01742 117 aa13.67□□□□□ -0.22
RPAIN-208ENST00000571043 HLA-DRB1P01911 266 aa13.67□□□□□ -0.22
RPAIN-208ENST00000571043 PLP1P60201 277 aa13.67□□□□□ -0.22
RPAIN-208ENST00000571043 RNF212Q495C1 297 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms