RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 NOXA1Q86UR1 476 aa9.7□□□□□ -0.86
CNOT1-220ENST00000569916 EDA2RQ9HAV5 297 aa9.7□□□□□ -0.86
CNOT1-220ENST00000569916 KMT2CQ8NEZ4 4911 aaKnown RBP9.7□□□□□ -0.86
CNOT1-220ENST00000569916 CENPXA8MT69 81 aa9.69□□□□□ -0.86
CNOT1-220ENST00000569916 FAM90A26D6RGX4 464 aa9.69□□□□□ -0.86
CNOT1-220ENST00000569916 PLA2G10O15496 165 aa9.69□□□□□ -0.86
CNOT1-220ENST00000569916 HOXB5P09067 269 aa9.69□□□□□ -0.86
CNOT1-220ENST00000569916 OR10J1P30954 320 aa9.69□□□□□ -0.86
CNOT1-220ENST00000569916 BMI1P35226 326 aa9.69□□□□□ -0.86
CNOT1-220ENST00000569916 GGNBP1Q5YKI7 109 aa9.69□□□□□ -0.86
CNOT1-220ENST00000569916 TCF24Q7RTU0 167 aa9.69□□□□□ -0.86
CNOT1-220ENST00000569916 LILRB2Q8N423 598 aa9.69□□□□□ -0.86
CNOT1-220ENST00000569916 OR1S2Q8NGQ3 325 aa9.69□□□□□ -0.86
CNOT1-220ENST00000569916 FAM110AQ9BQ89 295 aa9.69□□□□□ -0.86
CNOT1-220ENST00000569916 GGTLC1Q9BX51 225 aa9.69□□□□□ -0.86
CNOT1-220ENST00000569916 IGKV3-7A0A075B6H7 116 aa9.68□□□□□ -0.86
CNOT1-220ENST00000569916 LOC102724200A0A096LPH7 203 aaPredicted RBP9.68□□□□□ -0.86
CNOT1-220ENST00000569916 IGHV3-66A0A0C4DH42 116 aa9.68□□□□□ -0.86
CNOT1-220ENST00000569916 ADAP1O75689 374 aa9.68□□□□□ -0.86
CNOT1-220ENST00000569916 OR4E1P0C645 316 aa9.68□□□□□ -0.86
CNOT1-220ENST00000569916 IAPPP10997 89 aa9.68□□□□□ -0.86
CNOT1-220ENST00000569916 NPPCP23582 126 aa9.68□□□□□ -0.86
CNOT1-220ENST00000569916 CRYBB3P26998 211 aa9.68□□□□□ -0.86
CNOT1-220ENST00000569916 ATP5IP56385 69 aaPredicted RBP9.68□□□□□ -0.86
CNOT1-220ENST00000569916 YPEL3P61236 119 aaPredicted RBP9.68□□□□□ -0.86
CNOT1-220ENST00000569916 DHRS2Q13268 280 aa9.68□□□□□ -0.86
CNOT1-220ENST00000569916 LYG2Q86SG7 212 aa9.68□□□□□ -0.86
CNOT1-220ENST00000569916 MUC7Q8TAX7 377 aa9.68□□□□□ -0.86
CNOT1-220ENST00000569916 NPIPB3Q92617 1050 aa9.68□□□□□ -0.86
CNOT1-220ENST00000569916 ACY3Q96HD9 319 aa9.68□□□□□ -0.86
CNOT1-220ENST00000569916 C3orf84H3BNL1 204 aa9.67□□□□□ -0.86
CNOT1-220ENST00000569916 LYRM1O43325 122 aa9.67□□□□□ -0.86
CNOT1-220ENST00000569916 DFFBO76075 338 aa9.67□□□□□ -0.86
CNOT1-220ENST00000569916 IFNA4P05014 189 aa9.67□□□□□ -0.86
CNOT1-220ENST00000569916 ANXA7P20073 488 aaKnown RBP9.67□□□□□ -0.86
CNOT1-220ENST00000569916 TFPI2P48307 235 aa9.67□□□□□ -0.86
CNOT1-220ENST00000569916 METTL26Q96S19 204 aa9.67□□□□□ -0.86
CNOT1-220ENST00000569916 TMEM231Q9H6L2 316 aa9.67□□□□□ -0.86
CNOT1-220ENST00000569916 MPTX1A8MV57 137 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 SYNGR2O43760 224 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 MED6O75586 246 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 TOMM40O96008 361 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 CD5P06127 495 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 CNPY1Q3B7I2 92 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 C4orf46Q504U0 113 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 LINC00299Q6ZSB3 139 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 GBGT1Q8N5D6 347 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 COQ8AQ8NI60 647 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 Q8WTZ3 238 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 CCDC32Q9BV29 185 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 MAGT1Q9H0U3 335 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 C20orf85Q9H1P6 137 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 MAP6D1Q9H9H5 199 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 U3KQE9 123 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 NBEAL2Q6ZNJ1 2754 aa9.66□□□□□ -0.86
CNOT1-220ENST00000569916 A0A1W2PS18 150 aa9.65□□□□□ -0.86
CNOT1-220ENST00000569916 A6NHS1 94 aa9.65□□□□□ -0.86
CNOT1-220ENST00000569916 IL4P05112 153 aa9.65□□□□□ -0.86
CNOT1-220ENST00000569916 GPX4P36969 197 aaPredicted RBP9.65□□□□□ -0.86
CNOT1-220ENST00000569916 P2RY1P47900 373 aa9.65□□□□□ -0.86
CNOT1-220ENST00000569916 GAMTQ14353 236 aa9.65□□□□□ -0.86
CNOT1-220ENST00000569916 USF2Q15853 346 aaPredicted RBP9.65□□□□□ -0.86
CNOT1-220ENST00000569916 ZNF124Q15973 351 aa9.65□□□□□ -0.86
CNOT1-220ENST00000569916 APRG1Q8IVJ8 170 aa9.65□□□□□ -0.86
CNOT1-220ENST00000569916 CIB3Q96Q77 187 aaPredicted RBP9.65□□□□□ -0.86
CNOT1-220ENST00000569916 MS4A6AQ9H2W1 248 aa9.65□□□□□ -0.86
CNOT1-220ENST00000569916 IGKV1D-37A0A075B6S9 117 aa9.64□□□□□ -0.87
CNOT1-220ENST00000569916 TRAV2A0A0B4J234 112 aa9.64□□□□□ -0.87
CNOT1-220ENST00000569916 PRSS46E5RG02 174 aa9.64□□□□□ -0.87
CNOT1-220ENST00000569916 WRBO00258 174 aa9.64□□□□□ -0.87
CNOT1-220ENST00000569916 HNRNPCP07910 306 aaKnown RBP eCLIP9.64□□□□□ -0.876e-7■□□□□ 10.9
CNOT1-220ENST00000569916 RD3LP0DJH9 198 aa9.64□□□□□ -0.87
CNOT1-220ENST00000569916 PSG1P11464 419 aa9.64□□□□□ -0.87
CNOT1-220ENST00000569916 RAB11AP62491 216 aa9.64□□□□□ -0.87
CNOT1-220ENST00000569916 PAFAH1B2P68402 229 aa9.64□□□□□ -0.87
CNOT1-220ENST00000569916 CASC10Q5T4H9 136 aa9.64□□□□□ -0.87
CNOT1-220ENST00000569916 OR4D5Q8NGN0 318 aa9.64□□□□□ -0.87
CNOT1-220ENST00000569916 NARS2Q96I59 477 aaKnown RBP9.64□□□□□ -0.87
CNOT1-220ENST00000569916 SLC35E1Q96K37 410 aa9.64□□□□□ -0.87
CNOT1-220ENST00000569916 OVOL2Q9BRP0 275 aa9.64□□□□□ -0.87
CNOT1-220ENST00000569916 ZFP92A6NM28 416 aa9.63□□□□□ -0.87
CNOT1-220ENST00000569916 H3BP45 60 aa9.63□□□□□ -0.87
CNOT1-220ENST00000569916 DNASE2O00115 360 aaPredicted RBP9.63□□□□□ -0.87
CNOT1-220ENST00000569916 IFNA21P01568 189 aa9.63□□□□□ -0.87
CNOT1-220ENST00000569916 TCRBP04435 133 aa9.63□□□□□ -0.87
CNOT1-220ENST00000569916 APOC4P55056 127 aa9.63□□□□□ -0.87
CNOT1-220ENST00000569916 CMC4P56277 68 aaPredicted RBP9.63□□□□□ -0.87
CNOT1-220ENST00000569916 POLR2GP62487 172 aaKnown RBP eCLIP9.63□□□□□ -0.87
CNOT1-220ENST00000569916 RPL11P62913 178 aaKnown RBP9.63□□□□□ -0.87
CNOT1-220ENST00000569916 ID3Q02535 119 aa9.63□□□□□ -0.87
CNOT1-220ENST00000569916 C16orf54Q6UWD8 224 aa9.63□□□□□ -0.87
CNOT1-220ENST00000569916 WFDC3Q8IUB2 231 aa9.63□□□□□ -0.87
CNOT1-220ENST00000569916 FAM24BQ8N5W8 94 aa9.63□□□□□ -0.87
CNOT1-220ENST00000569916 MITD1Q8WV92 249 aa9.63□□□□□ -0.87
CNOT1-220ENST00000569916 GLMPQ8WWB7 406 aa9.63□□□□□ -0.87
CNOT1-220ENST00000569916 PAIP2BQ9ULR5 123 aaKnown RBP9.63□□□□□ -0.87
CNOT1-220ENST00000569916 STARD9Q9P2P6 4700 aa9.63□□□□□ -0.87
CNOT1-220ENST00000569916 IGKV1OR2-108A0A075B7D4 117 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 KIR2DL5BA0A0G2JN68 375 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 KIR2DL5BA0A0G2JPC4 375 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms