RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 FOXI3A8MTJ6 420 aaPredicted RBP5.91□□□□□ -1.46
CNOT1-216ENST00000569240 SOCS3O14543 225 aa5.91□□□□□ -1.46
CNOT1-216ENST00000569240 IGHV4-39P01824 125 aa5.91□□□□□ -1.46
CNOT1-216ENST00000569240 HLA-DRB4P13762 266 aa5.91□□□□□ -1.46
CNOT1-216ENST00000569240 Q8N8P6 123 aa5.91□□□□□ -1.46
CNOT1-216ENST00000569240 RASL10AQ92737 203 aa5.91□□□□□ -1.46
CNOT1-216ENST00000569240 BADQ92934 168 aa5.91□□□□□ -1.46
CNOT1-216ENST00000569240 LINC00312Q9Y6C7 94 aa5.91□□□□□ -1.46
CNOT1-216ENST00000569240 HLA-DRB4X5D2U9 266 aa5.91□□□□□ -1.46
CNOT1-216ENST00000569240 SCN1AP35498 2009 aa5.91□□□□□ -1.46
CNOT1-216ENST00000569240 IGKV1-9A0A0C4DH69 117 aa5.9□□□□□ -1.46
CNOT1-216ENST00000569240 B5MCH6 92 aa5.9□□□□□ -1.46
CNOT1-216ENST00000569240 PRSS46E5RG02 174 aa5.9□□□□□ -1.46
CNOT1-216ENST00000569240 MRPL14Q6P1L8 145 aaKnown RBP5.9□□□□□ -1.46
CNOT1-216ENST00000569240 FOXI2Q6ZQN5 318 aa5.9□□□□□ -1.46
CNOT1-216ENST00000569240 PATE4P0C8F1 98 aa5.9□□□□□ -1.46
CNOT1-216ENST00000569240 V9GYV3 84 aa5.9□□□□□ -1.46
CNOT1-216ENST00000569240 A0A1W2PPI3 338 aa5.9□□□□□ -1.46
CNOT1-216ENST00000569240 DUTP33316 252 aaKnown RBP5.9□□□□□ -1.46
CNOT1-216ENST00000569240 WFDC8Q8IUA0 241 aa5.9□□□□□ -1.46
CNOT1-216ENST00000569240 PCM1Q15154 2024 aa5.9□□□□□ -1.46
CNOT1-216ENST00000569240 DDB2Q92466 427 aa5.9□□□□□ -1.47
CNOT1-216ENST00000569240 MRPL20Q9BYC9 149 aaKnown RBP5.9□□□□□ -1.47
CNOT1-216ENST00000569240 VSIRQ9H7M9 311 aa5.9□□□□□ -1.47
CNOT1-216ENST00000569240 A0A0A6YYD4 124 aa5.9□□□□□ -1.47
CNOT1-216ENST00000569240 ZDHHC16Q969W1 377 aa5.9□□□□□ -1.47
CNOT1-216ENST00000569240 UCN2Q96RP3 112 aa5.9□□□□□ -1.47
CNOT1-216ENST00000569240 IGKV1D-13A0A0B4J2D9 117 aa5.9□□□□□ -1.47
CNOT1-216ENST00000569240 IGKV1-13P0DP09 117 aa5.9□□□□□ -1.47
CNOT1-216ENST00000569240 SNRPD3P62318 126 aaKnown RBP5.9□□□□□ -1.47
CNOT1-216ENST00000569240 IGKV3D-11A0A0A0MRZ8 115 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 CRPP02741 224 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 VDAC2P45880 294 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-216ENST00000569240 TMEM75Q8N9X5 138 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 DPH3P1Q9H4G8 78 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 D6R8Y8 96 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 HRKO00198 91 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 MNX1P50219 401 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-216ENST00000569240 SMRP1Q8NCR6 262 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 TTC3P53804 2025 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 EVPLQ92817 2033 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 AHRRA9YTQ3 701 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 PRKNO60260 465 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-216ENST00000569240 DUSP14O95147 198 aaKnown RBP5.89□□□□□ -1.47
CNOT1-216ENST00000569240 FAM104BQ5XKR9 115 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 Q6ZS92 163 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 GTSCR1Q86UQ5 136 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 OR13A1Q8NGR1 328 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 CEACAM4O75871 244 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 SPATA12Q7Z6I5 190 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 UBL5Q9BZL1 73 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 C21orf62Q9NYP8 219 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 CCDC88CQ9P219 2028 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 TAF1LQ8IZX4 1826 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 VWC2LB2RUY7 222 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 FAM214BQ7L5A3 538 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 TRGV11A0A075B6L2 103 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 CD3EP07766 207 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 CRYGSP22914 178 aa5.89□□□□□ -1.47
CNOT1-216ENST00000569240 PRR32B1ATL7 298 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 H3BT86 120 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 FOXL2NBQ6ZUU3 175 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 DTX1Q86Y01 620 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 PLPPR2Q96GM1 343 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 ZNFX1Q9P2E3 1918 aaKnown RBP5.88□□□□□ -1.47
CNOT1-216ENST00000569240 PRSS47A8MTI9 375 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 VEGFBP49765 207 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 RPL32P62910 135 aaKnown RBP5.88□□□□□ -1.47
CNOT1-216ENST00000569240 DMRTC2Q8IXT2 367 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-216ENST00000569240 KLK15Q9H2R5 256 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 ZNHIT1O43257 154 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 IGKV1-5P01602 117 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 RNF125Q96EQ8 232 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 ARFGEF1Q9Y6D6 1849 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 SCN2AQ99250 2005 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 C12orf74Q32Q52 190 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 C1orf53Q5VUE5 145 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 C15orf53Q8NAA6 179 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 TMEM167AQ8TBQ9 72 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 HCSTQ9UBK5 93 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 DOCK1Q14185 1865 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 F8VRH5 84 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 CCL3P10147 92 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 RBX1P62877 108 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 TEX48A0A1B0GUV7 120 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 COX7A1P24310 79 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 Q86TA4 180 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 DYNLRB2Q8TF09 96 aa5.88□□□□□ -1.47
CNOT1-216ENST00000569240 ZNF501Q96CX3 271 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-216ENST00000569240 PHF7Q9BWX1 381 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-216ENST00000569240 PRR33A8MZF0 331 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 SPACA3Q8IXA5 215 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 PHLDA1Q8WV24 401 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-216ENST00000569240 H0YJW9 148 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 IGFBP6P24592 240 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-216ENST00000569240 CCL7P80098 99 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 SFTA2Q6UW10 78 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 PNRC2Q9NPJ4 139 aaKnown RBP5.87□□□□□ -1.47
CNOT1-216ENST00000569240 TRAV26-1A0A087WT03 109 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms