RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 DYNLT1P63172 113 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 C4orf26Q17RF5 130 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 HBMQ6B0K9 141 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 LCN15Q6UWW0 184 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 NTM-AS1Q6ZSK4 140 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 OR1L8Q8NGR8 309 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 SLC25A40Q8TBP6 338 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 STARD4Q96DR4 205 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 SMIM19Q96E16 107 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 CHST6Q9GZX3 395 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 PARP12Q9H0J9 701 aaKnown RBP3.6□□□□□ -1.83
UBR1-208ENST00000569066 OR51I1Q9H343 314 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 TP73-AS1Q9UF72 201 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 INSIG2Q9Y5U4 225 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 SCN1AP35498 2009 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 MYO3AQ8NEV4 1616 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 ANKRD31Q8N7Z5 1873 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.6□□□□□ -1.83
UBR1-208ENST00000569066 MRC1P22897 1456 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 IGLV4-69A0A075B6H9 119 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 C7orf71A4D174 169 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 NAP1L6A6NFF2 107 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 TLCD2A6NGC4 264 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 SLC25A14O95258 325 aaPredicted RBP3.6□□□□□ -1.83
UBR1-208ENST00000569066 SFT2D2O95562 160 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 SRP14P37108 136 aaKnown RBP3.6□□□□□ -1.83
UBR1-208ENST00000569066 GUCA1AP43080 201 aaPredicted RBP3.6□□□□□ -1.83
UBR1-208ENST00000569066 CXCL12P48061 93 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 GNG5P63218 68 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 KIR2DS1Q14954 304 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 TCEAL5Q5H9L2 206 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 FAM78AQ5JUQ0 283 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 CLEC12AQ5QGZ9 265 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 HMGN2P46Q86SG4 172 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.6□□□□□ -1.83
UBR1-208ENST00000569066 OR51A4Q8NGJ6 313 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 SKA2Q8WVK7 121 aaPredicted RBP3.6□□□□□ -1.83
UBR1-208ENST00000569066 HSPB9Q9BQS6 159 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 FGF23Q9GZV9 251 aaPredicted RBP3.6□□□□□ -1.83
UBR1-208ENST00000569066 REEP1Q9H902 201 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 WASHC3Q9Y3C0 194 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 LINC00312Q9Y6C7 94 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 DOCK5Q9H7D0 1870 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 RGPD1P0DJD0 1748 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 SBF1O95248 1867 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 TRAV36DV7A0A075B6V5 113 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 CCL15-CCL14A0A0B4J2E2 113 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 KIR2DS1A0A191URI9 304 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 OR4C46A6NHA9 309 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 CTSEP14091 401 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 C1DQ13901 141 aaKnown RBP3.59□□□□□ -1.83
UBR1-208ENST00000569066 IGFBP7Q16270 282 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 TBC1D28Q2M2D7 210 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 ACTL10Q5JWF8 245 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 AGTRAPQ6RW13 159 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 Q8N9L7 120 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 OR4K17Q8NGC6 315 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 OR51A2Q8NGJ7 313 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 CT55Q8WUE5 264 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 TMEM243Q9BU79 118 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 MAP1LC3AQ9H492 121 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 SPANXB1Q9NS25 103 aaPredicted RBP3.59□□□□□ -1.83
UBR1-208ENST00000569066 TMEM242Q9NWH2 141 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 CYSLTR1Q9Y271 337 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 ZNF257Q9Y2Q1 563 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 NUP205Q92621 2012 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 ARAP2Q8WZ64 1704 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 TNS2Q63HR2 1409 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 NUP210LQ5VU65 1888 aa3.59□□□□□ -1.83
UBR1-208ENST00000569066 LOC102725191A0A1B0GVB3 256 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 OR7C1O76099 320 aaPredicted RBP3.59□□□□□ -1.84
UBR1-208ENST00000569066 SOX14O95416 240 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 CELP19835 753 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 OPRM1P35372 400 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 GFERP55789 205 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 GRB2P62993 217 aaKnown RBP3.59□□□□□ -1.84
UBR1-208ENST00000569066 FUT5Q11128 374 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 GLYATL3Q5SZD4 288 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 LRRC25Q8N386 305 aaPredicted RBP3.59□□□□□ -1.84
UBR1-208ENST00000569066 TTC9CQ8N5M4 171 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 OR10G6Q8NH81 332 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 OR5AK2Q8NH90 309 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 TVP23CQ96ET8 276 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 LINC00167Q96N53 147 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 DPY30Q9C005 99 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 TMEM133Q9H2Q1 129 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 COMMD9Q9P000 198 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 TAAR3PQ9P1P4 343 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 OR5V1Q9UGF6 321 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 HEATR5AQ86XA9 2040 aa3.59□□□□□ -1.84
UBR1-208ENST00000569066 SNRNP200O75643 2136 aaKnown RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 HELZP42694 1942 aaKnown RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 IGKV1-27A0A075B6S5 117 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 M0R1X1 148 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 TNFRSF11BO00300 401 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 CYB5AP00167 134 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 PFN1P07737 140 aaKnown RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 C8orf88P0DMB2 117 aa3.58□□□□□ -1.84
UBR1-208ENST00000569066 HIST1H1TP22492 207 aaPredicted RBP3.58□□□□□ -1.84
UBR1-208ENST00000569066 CCR2P41597 374 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms