RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 MKXQ8IYA7 352 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 C14orf178Q8N769 122 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 SUMF2Q8NBJ7 301 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 LY6G5BQ8NDX9 201 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 GPR32P1Q8NGA4 272 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR4M1Q8NGD0 313 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR51D1Q8NGF3 324 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 STOML3Q8TAV4 291 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 HAVCR2Q8TDQ0 301 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 TLCD1Q96CP7 247 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 SMIM12Q96EX1 92 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 KCNS1Q96KK3 526 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 HSD17B10Q99714 261 aaKnown RBP2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 PRSS27Q9BQR3 290 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 MRPL20Q9BYC9 149 aaKnown RBP2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 MROQ9BYG7 248 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR51E2Q9H255 320 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 C12orf10Q9HB07 376 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 SLC2A9Q9NRM0 540 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 INIPQ9NRY2 104 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 CALML5Q9NZT1 146 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 PRO0628Q9UI54 55 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 LINC00527Q9UJ94 153 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 ZNF391Q9UJN7 358 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 SLC22A13Q9Y226 551 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 TP53TG1Q9Y2A0 90 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 SAMHD1Q9Y3Z3 626 aaKnown RBP2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 DSCAML1Q8TD84 2053 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 PCLOQ9Y6V0 5065 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 TRAV27A0A087WT01 109 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 IGHV3-74A0A0B4J1X5 117 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 TRAV38-1A0A0B4J264 116 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 GGT3PA6NGU5 568 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 ZNF705GA8MUZ8 300 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 IQCF6A8MYZ5 107 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 EVPLLA8MZ36 301 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 DNASE2O00115 360 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 NDUFB3O43676 98 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 CHP2O43745 196 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 SERPINA1P01009 418 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 PIPP12273 146 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 IFI30P13284 250 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 CTLA4P16410 223 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 CRISP2P16562 243 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 CCL3L1P16619 93 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 PRSS3P35030 304 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 RPS27P42677 84 aaKnown RBP2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 CXCL5P42830 114 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 GUCA1AP43080 201 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 KIR3DL2P43630 455 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 GABRA2P47869 451 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR1E2P47887 323 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 NMUP48645 174 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 SULT1A2P50226 295 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 POLR2JP52435 117 aaKnown RBP2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 ZNF133P52736 654 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 PCBD1P61457 104 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 RANP62826 216 aaKnown RBP2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 CDK6Q00534 326 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 CDK5Q00535 292 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 ZNF181Q2M3W8 571 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 DEFB136Q30KP8 78 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 ABCA11PQ4W5N1 156 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 SPIN3Q5JUX0 258 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 LAMTOR1Q6IAA8 161 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 DHRS4L2Q6PKH6 230 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 C5orf46Q6UWT4 87 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 FAM19A5Q7Z5A7 132 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 DPPA2Q7Z7J5 298 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 PRNTQ86SH4 94 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 WDR86Q86TI4 376 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 MSRB3Q8IXL7 192 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 DRAM1Q8N682 238 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 LINC00337Q8N6G1 96 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR4P4Q8NGL7 312 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 CYGBQ8WWM9 190 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 FAM104AQ969W3 186 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 Q96M85 177 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 ADAT1Q9BUB4 502 aaKnown RBP2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 PECRQ9BY49 303 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 SLC22A4Q9H015 551 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 TXNIPQ9H3M7 391 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 BCL2L10Q9HD36 194 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 RBM12B-AS1Q9P1G2 102 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 C14orf166Q9Y224 244 aaKnown RBP2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 NDUFAF1Q9Y375 327 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 HILPDAQ9Y5L2 63 aa2.19□□□□□ -2.06
HMGB1P6-201ENST00000569046 FRAS1Q86XX4 4008 aa2.18□□□□□ -2.06
HMGB1P6-201ENST00000569046 LOC389332A0A1B0GUA5 103 aa2.18□□□□□ -2.06
HMGB1P6-201ENST00000569046 TRAPPC13A5PLN9 417 aa2.18□□□□□ -2.06
HMGB1P6-201ENST00000569046 A6NDX4 124 aa2.18□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR6C6A6NF89 314 aa2.18□□□□□ -2.06
HMGB1P6-201ENST00000569046 C8orf87E5RJ46 101 aa2.18□□□□□ -2.06
HMGB1P6-201ENST00000569046 H3BSA7 217 aa2.18□□□□□ -2.06
HMGB1P6-201ENST00000569046 MFNGO00587 321 aa2.18□□□□□ -2.06
HMGB1P6-201ENST00000569046 TAAR5O14804 337 aa2.18□□□□□ -2.06
HMGB1P6-201ENST00000569046 GATBO75879 557 aaKnown RBP2.18□□□□□ -2.06
HMGB1P6-201ENST00000569046 LHBP01229 141 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms