RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 HERV-K104P61576 105 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 ELOBQ15370 118 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 ECSCRQ19T08 205 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 SSX9Q7RTT3 188 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 H1FOOQ8IZA3 346 aaPredicted RBP8.37□□□□□ -1.07
CDH3-208ENST00000569036 HIST3H2BBQ8N257 126 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 ISOC2Q96AB3 205 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 RHOVQ96L33 236 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 SPACA5Q96QH8 159 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 SLC2A9Q9NRM0 540 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 FOXA2Q9Y261 457 aaPredicted RBP8.37□□□□□ -1.07
CDH3-208ENST00000569036 FLG2Q5D862 2391 aaPredicted RBP8.36□□□□□ -1.07
CDH3-208ENST00000569036 LOC102724200A0A096LPH7 203 aaPredicted RBP8.36□□□□□ -1.07
CDH3-208ENST00000569036 IGHV7-81A0A0B4J1V7 117 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 KBTBD11-OT1A0A1B0GTJ5 212 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 TRDCB7Z8K6 153 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 M0R2N4 97 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 SDCBPO00560 298 aaPredicted RBP8.36□□□□□ -1.07
CDH3-208ENST00000569036 SLC31A2O15432 143 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 HIST1H2BKO60814 126 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 HIST1H2BJP06899 126 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 CTXN2P0C2S0 81 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 TMEM225BP0DP42 221 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 PI3P19957 117 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 HIST1H2BOP23527 126 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 DDTP30046 118 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 HIST1H2BBP33778 126 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 NKX2-1P43699 371 aaPredicted RBP8.36□□□□□ -1.07
CDH3-208ENST00000569036 HIST1H2BDP58876 126 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 NANOS2P60321 138 aaKnown RBP8.36□□□□□ -1.07
CDH3-208ENST00000569036 HIST1H2BCP62807 126 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 HLA-DRB3P79483 266 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 HIST2H2BEQ16778 126 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 ZNF674Q2M3X9 581 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 CD300EQ496F6 205 aaPredicted RBP8.36□□□□□ -1.07
CDH3-208ENST00000569036 AKIRIN2Q53H80 203 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.36□□□□□ -1.07
CDH3-208ENST00000569036 AKR1C8PQ5T2L2 129 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 TMEM42Q69YG0 159 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 SPSB3Q6PJ21 355 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 OR2G3Q8NGZ4 309 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 HIST1H2BHQ93079 126 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 COQ2Q96H96 371 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 HIST1H2BNQ99877 126 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 HIST1H2BMQ99879 126 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 AGMATQ9BSE5 352 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 PSMG3Q9BT73 122 aaPredicted RBP8.36□□□□□ -1.07
CDH3-208ENST00000569036 WFDC1Q9HC57 220 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 AK3Q9UIJ7 227 aa8.36□□□□□ -1.07
CDH3-208ENST00000569036 RCL1Q9Y2P8 373 aaKnown RBP8.36□□□□□ -1.07
CDH3-208ENST00000569036 LOC102723971A0A1B0GUV8 181 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 SMCO3A2RU48 225 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 SCGB1D2O95969 90 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 GCGP01275 180 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 HLA-DRB1P01911 266 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 CGB3P0DN86 165 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 CGB7P0DN87 165 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 SERPINA2P20848 420 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 ATP6V0CP27449 155 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 S100GP29377 79 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 SPCS3P61009 180 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 VAMP2P63027 116 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 NDPQ00604 133 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 ZNF146Q15072 292 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 DEFB135Q30KP9 77 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 TMEM182Q6ZP80 229 aaPredicted RBP8.35□□□□□ -1.07
CDH3-208ENST00000569036 ZNF383Q8NA42 475 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 Q8WTZ3 238 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 ACY3Q96HD9 319 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 FAM210BQ96KR6 192 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 ATP5SQ99766 215 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 SMIM3Q9BZL3 60 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 ACTR3CQ9C0K3 210 aaPredicted RBP8.35□□□□□ -1.07
CDH3-208ENST00000569036 TMEM222Q9H0R3 208 aa8.35□□□□□ -1.07
CDH3-208ENST00000569036 PUS1Q9Y606 427 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDH3-208ENST00000569036 IFITM10A6NMD0 228 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 IGLL5B9A064 214 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 GEMIN2O14893 280 aaKnown RBP8.34□□□□□ -1.07
CDH3-208ENST00000569036 PDCD6O75340 191 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 DIRAS3O95661 229 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 OR13C7P0DN81 318 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 RAB4AP20338 218 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 PPP1CCP36873 323 aaKnown RBP8.34□□□□□ -1.07
CDH3-208ENST00000569036 AKR1C3P42330 323 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 NDUFA6P56556 154 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 TPPP2P59282 170 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 TAS2R30P59541 319 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 ICAM4Q14773 271 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 JOSD1Q15040 202 aaPredicted RBP8.34□□□□□ -1.07
CDH3-208ENST00000569036 MMDQ15546 238 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 LTC4SQ16873 150 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 MPV17LQ2QL34 196 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 Q6ZWC4 215 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 TMEM183AQ8IXX5 376 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 HSD17B11Q8NBQ5 300 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 MBD3L1Q8WWY6 194 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 PINX1Q96BK5 328 aaKnown RBP8.34□□□□□ -1.07
CDH3-208ENST00000569036 C14orf144Q96I85 54 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 MS4A10Q96PG2 267 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 MBNL3Q9NUK0 354 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms