RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 ZNF600Q6ZNG1 722 aa13.79□□□□□ -0.2
SYNGR3-205ENST00000568896 SLC16A13Q7RTY0 426 aa13.79□□□□□ -0.2
SYNGR3-205ENST00000568896 NRARPQ7Z6K4 114 aa13.79□□□□□ -0.2
SYNGR3-205ENST00000568896 TMEM116Q8NCL8 245 aa13.79□□□□□ -0.2
SYNGR3-205ENST00000568896 CIB3Q96Q77 187 aaPredicted RBP13.79□□□□□ -0.2
SYNGR3-205ENST00000568896 SORL1Q92673 2214 aa13.78□□□□□ -0.2
SYNGR3-205ENST00000568896 CCSO14618 274 aa13.78□□□□□ -0.2
SYNGR3-205ENST00000568896 NKX2-1P43699 371 aaPredicted RBP13.78□□□□□ -0.2
SYNGR3-205ENST00000568896 DEFA1P59665 94 aa13.78□□□□□ -0.2
SYNGR3-205ENST00000568896 DEFA3P59666 94 aa13.78□□□□□ -0.2
SYNGR3-205ENST00000568896 POLR2GP62487 172 aaKnown RBP eCLIP13.78□□□□□ -0.2
SYNGR3-205ENST00000568896 ETFRF1Q6IPR1 90 aa13.78□□□□□ -0.2
SYNGR3-205ENST00000568896 TMEM61Q8N0U2 210 aa13.78□□□□□ -0.2
SYNGR3-205ENST00000568896 C12orf45Q8N5I9 185 aaPredicted RBP13.78□□□□□ -0.2
SYNGR3-205ENST00000568896 ZBTB8BQ8NAP8 495 aaPredicted RBP13.78□□□□□ -0.2
SYNGR3-205ENST00000568896 ZNF785A8K8V0 405 aa13.77□□□□□ -0.21
SYNGR3-205ENST00000568896 IGKV1-17P01599 117 aa13.77□□□□□ -0.21
SYNGR3-205ENST00000568896 IL5P05113 134 aa13.77□□□□□ -0.21
SYNGR3-205ENST00000568896 IGLC1P0CG04 106 aa13.77□□□□□ -0.21
SYNGR3-205ENST00000568896 TOMM20LQ6UXN7 152 aa13.77□□□□□ -0.21
SYNGR3-205ENST00000568896 Q8N1Y9 231 aa13.77□□□□□ -0.21
SYNGR3-205ENST00000568896 WDR89Q96FK6 387 aaPredicted RBP13.77□□□□□ -0.21
SYNGR3-205ENST00000568896 ZFAND3Q9H8U3 227 aa13.77□□□□□ -0.21
SYNGR3-205ENST00000568896 PUS1Q9Y606 427 aaKnown RBP eCLIP13.77□□□□□ -0.21
SYNGR3-205ENST00000568896 TRAV30A0A087WSZ9 112 aa13.76□□□□□ -0.21
SYNGR3-205ENST00000568896 SCGB2A1O75556 95 aa13.76□□□□□ -0.21
SYNGR3-205ENST00000568896 LYL1P12980 280 aa13.76□□□□□ -0.21
SYNGR3-205ENST00000568896 RAB11AP62491 216 aa13.76□□□□□ -0.21
SYNGR3-205ENST00000568896 TIGITQ495A1 244 aa13.76□□□□□ -0.21
SYNGR3-205ENST00000568896 NPIPB3Q92617 1050 aa13.76□□□□□ -0.21
SYNGR3-205ENST00000568896 ACY3Q96HD9 319 aa13.76□□□□□ -0.21
SYNGR3-205ENST00000568896 GSKIPQ9P0R6 139 aa13.76□□□□□ -0.21
SYNGR3-205ENST00000568896 PAIP2BQ9ULR5 123 aaKnown RBP13.76□□□□□ -0.21
SYNGR3-205ENST00000568896 H3BP45 60 aa13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 SSSCA1O60232 199 aa13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 SCGB1D2O95969 90 aa13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 OR10J1P30954 320 aa13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 RPP30P78346 268 aaKnown RBP13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 GUCA2BQ16661 112 aa13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 SPANXN5Q5MJ07 72 aa13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 ZFAND6Q6FIF0 208 aa13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 GTSCR1Q86UQ5 136 aa13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 OR1S2Q8NGQ3 325 aa13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 GINS3Q9BRX5 216 aa13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 SMPXQ9UHP9 88 aa13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 CSMD3Q7Z407 3707 aa13.75□□□□□ -0.21
SYNGR3-205ENST00000568896 IGHV7-4-1A0A0J9YVY3 117 aa13.74□□□□□ -0.21
SYNGR3-205ENST00000568896 INMT-MINDY4F8WBC2 141 aa13.74□□□□□ -0.21
SYNGR3-205ENST00000568896 SCAF4O95104 1147 aaKnown RBP13.74□□□□□ -0.21
SYNGR3-205ENST00000568896 GPX4P36969 197 aaPredicted RBP13.74□□□□□ -0.21
SYNGR3-205ENST00000568896 GPN1Q9HCN4 374 aaPredicted RBP13.74□□□□□ -0.21
SYNGR3-205ENST00000568896 STRAPQ9Y3F4 350 aaKnown RBP13.74□□□□□ -0.21
SYNGR3-205ENST00000568896 IGHV3-49A0A0A0MS15 119 aa13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 TRAV14DV4A0A0A6YYC5 116 aa13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 TRAV25A0A0B4J276 109 aa13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 FAM25EA8MYX2 175 aa13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 PRSS46E5RG02 174 aa13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 MBPP02686 304 aaPredicted RBP13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 YPEL3P61236 119 aaPredicted RBP13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 GAMTQ14353 236 aa13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 SLC35E1Q96K37 410 aa13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 MARVELD1Q9BSK0 173 aa13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 RHPN1-AS1Q9BWJ2 59 aa13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 ZMAT4Q9H898 229 aa13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 PSENENQ9NZ42 101 aa13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 RCL1Q9Y2P8 373 aaKnown RBP13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 HYDINQ4G0P3 5121 aa13.73□□□□□ -0.21
SYNGR3-205ENST00000568896 LCE6AA0A183 80 aa13.72□□□□□ -0.21
SYNGR3-205ENST00000568896 C5orf51A6NDU8 294 aa13.72□□□□□ -0.21
SYNGR3-205ENST00000568896 CHEK1O14757 476 aa13.72□□□□□ -0.21
SYNGR3-205ENST00000568896 PRAF2O60831 178 aa13.72□□□□□ -0.21
SYNGR3-205ENST00000568896 CD7P09564 240 aa13.72□□□□□ -0.21
SYNGR3-205ENST00000568896 PAX9P55771 341 aa13.72□□□□□ -0.21
SYNGR3-205ENST00000568896 CD81P60033 236 aa13.72□□□□□ -0.21
SYNGR3-205ENST00000568896 RBPMS2Q6ZRY4 209 aaKnown RBP13.72□□□□□ -0.21
SYNGR3-205ENST00000568896 SMIM8Q96KF7 97 aa13.72□□□□□ -0.21
SYNGR3-205ENST00000568896 IGHV3OR16-13A0A075B7E8 117 aa13.71□□□□□ -0.21
SYNGR3-205ENST00000568896 IGHV3-74A0A0B4J1X5 117 aa13.71□□□□□ -0.21
SYNGR3-205ENST00000568896 SNRPGP15A8MWD9 76 aa13.71□□□□□ -0.21
SYNGR3-205ENST00000568896 IGHV4-30-4P0DP06 118 aa13.71□□□□□ -0.21
SYNGR3-205ENST00000568896 C2orf50Q96LR7 162 aa13.71□□□□□ -0.21
SYNGR3-205ENST00000568896 CITED4Q96RK1 184 aa13.71□□□□□ -0.21
SYNGR3-205ENST00000568896 RAB40CQ96S21 281 aa13.71□□□□□ -0.21
SYNGR3-205ENST00000568896 RNF2Q99496 336 aa13.71□□□□□ -0.21
SYNGR3-205ENST00000568896 NEURL2Q9BR09 285 aa13.71□□□□□ -0.21
SYNGR3-205ENST00000568896 PLECQ15149 4684 aaKnown RBP13.7□□□□□ -0.22
SYNGR3-205ENST00000568896 TSPAN4O14817 238 aa13.7□□□□□ -0.22
SYNGR3-205ENST00000568896 TOMM40O96008 361 aa13.7□□□□□ -0.22
SYNGR3-205ENST00000568896 APOHP02749 345 aaPredicted RBP13.7□□□□□ -0.22
SYNGR3-205ENST00000568896 TAS2R30P59541 319 aa13.7□□□□□ -0.22
SYNGR3-205ENST00000568896 LAMTOR1Q6IAA8 161 aa13.7□□□□□ -0.22
SYNGR3-205ENST00000568896 GSG1LQ6UXU4 331 aa13.7□□□□□ -0.22
SYNGR3-205ENST00000568896 Q8WTZ3 238 aa13.7□□□□□ -0.22
SYNGR3-205ENST00000568896 ST8SIA2Q92186 375 aa13.7□□□□□ -0.22
SYNGR3-205ENST00000568896 SPAG8Q99932 426 aaPredicted RBP13.7□□□□□ -0.22
SYNGR3-205ENST00000568896 TM2D3Q9BRN9 247 aa13.7□□□□□ -0.22
SYNGR3-205ENST00000568896 VSIRQ9H7M9 311 aa13.7□□□□□ -0.22
SYNGR3-205ENST00000568896 IGKV1D-37A0A075B6S9 117 aa13.69□□□□□ -0.22
SYNGR3-205ENST00000568896 ZFP92A6NM28 416 aa13.69□□□□□ -0.22
SYNGR3-205ENST00000568896 A8MZ25 164 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms