RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 TRAV2A0A0B4J234 112 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 TEX50A0A1B0GTY4 177 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 BUB3O43684 328 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 CD5P06127 495 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 EIF4EP06730 217 aaKnown RBP3.96□□□□□ -1.78
CDH13-211ENST00000568770 SPART-AS1P0CW21 52 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 TRAPPC2P0DI81 140 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 TRAPPC2BP0DI82 140 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 HIST1H1DP16402 221 aaKnown RBP3.96□□□□□ -1.78
CDH13-211ENST00000568770 GADD45AP24522 165 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 EMP1P54849 157 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 TAS2R31P59538 309 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 RPL24P83731 157 aaKnown RBP3.96□□□□□ -1.78
CDH13-211ENST00000568770 ACTL10Q5JWF8 245 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 UBE2UQ5VVX9 321 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 ZNF773Q6PK81 442 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 AHSA2Q719I0 299 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 HSD17B13Q7Z5P4 300 aaPredicted RBP3.96□□□□□ -1.78
CDH13-211ENST00000568770 SMIM29Q86T20 159 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 SPAG16Q8N0X2 631 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 C6orf223Q8N319 242 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 DUSP18Q8NEJ0 188 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 TMEM203Q969S6 136 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 FAM210BQ96KR6 192 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 HINT2Q9BX68 163 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 KRTAP1-5Q9BYS1 174 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 NXF2Q9GZY0 626 aaKnown RBP3.96□□□□□ -1.78
CDH13-211ENST00000568770 RNF167Q9H6Y7 350 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 VSIRQ9H7M9 311 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 ELF5Q9UKW6 265 aaPredicted RBP3.96□□□□□ -1.78
CDH13-211ENST00000568770 RAB22AQ9UL26 194 aa3.96□□□□□ -1.78
CDH13-211ENST00000568770 F11RQ9Y624 299 aaKnown RBP3.96□□□□□ -1.78
CDH13-211ENST00000568770 NBDYA0A0U1RRE5 68 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 SULT1C2O00338 296 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 HPRT1P00492 218 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 IGHV3-48P01763 117 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 CTXN2P0C2S0 81 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 ZNF688P0C7X2 276 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 HTN3P15516 51 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 NQO2P16083 231 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 DTYMKP23919 212 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 POU2AF1Q16633 256 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 HES5Q5TA89 166 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 THOC7Q6I9Y2 204 aaKnown RBP3.95□□□□□ -1.78
CDH13-211ENST00000568770 LAIR2Q6ISS4 152 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 ZFP1Q6P2D0 407 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 TOMM20LQ6UXN7 152 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 DMBX1Q8NFW5 382 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 OR1L8Q8NGR8 309 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 CYGBQ8WWM9 190 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 LSM10Q969L4 123 aaKnown RBP3.95□□□□□ -1.78
CDH13-211ENST00000568770 SLC25A46Q96AG3 418 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 YTHDF1Q9BYJ9 559 aaKnown RBP3.95□□□□□ -1.78
CDH13-211ENST00000568770 CCL28Q9NRJ3 127 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 NDUFA4L2Q9NRX3 87 aa3.95□□□□□ -1.78
CDH13-211ENST00000568770 TEX13DA0A0J9YY54 714 aaPredicted RBP3.94□□□□□ -1.78
CDH13-211ENST00000568770 K7EQG2 157 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 RBFOX2O43251 390 aaKnown RBP eCLIP3.94□□□□□ -1.78
CDH13-211ENST00000568770 GNG7O60262 68 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 CALRP27797 417 aaKnown RBP3.94□□□□□ -1.78
CDH13-211ENST00000568770 RCN1Q15293 331 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 FAM222AQ5U5X8 452 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 CNIH2Q6PI25 160 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 TMEM91Q6ZNR0 172 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 STXBP6Q8NFX7 210 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 DCANP1Q8TF63 244 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 RAB40CQ96S21 281 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 ABHD1Q96SE0 405 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 TXN2Q99757 166 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 GINS3Q9BRX5 216 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 NIPSNAP3BQ9BS92 247 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 ATG101Q9BSB4 218 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 MND1Q9BWT6 205 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 DCSTAMPQ9H295 470 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 SDF2L1Q9HCN8 221 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 XCL2Q9UBD3 114 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 PSORS1C1Q9UIG5 152 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 TMED3Q9Y3Q3 217 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 V9GY05 133 aa3.94□□□□□ -1.78
CDH13-211ENST00000568770 A0A1W2PS18 150 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 TMEM189A5PLL7 270 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 METTL21EPA6NDL7 271 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 ERICH4A6NGS2 130 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 ZNF705FA8MVS1 300 aaPredicted RBP3.93□□□□□ -1.78
CDH13-211ENST00000568770 I3L2K1 104 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 ARL6IP5O75915 188 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 ATP5HO75947 161 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 MT-CO2P00403 227 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 GNAO1P09471 354 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 ZNF705DP0CH99 300 aaPredicted RBP3.93□□□□□ -1.78
CDH13-211ENST00000568770 ZNF705BP0CI00 300 aaPredicted RBP3.93□□□□□ -1.78
CDH13-211ENST00000568770 PTHLHP12272 177 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 FCGR2CP31995 323 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 RANBP1P43487 201 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 NUTF2P61970 127 aaKnown RBP3.93□□□□□ -1.78
CDH13-211ENST00000568770 RPS25P62851 125 aaKnown RBP3.93□□□□□ -1.78
CDH13-211ENST00000568770 SPHARQ15513 63 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 MSMO1Q15800 293 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 CDNFQ49AH0 187 aa3.93□□□□□ -1.78
CDH13-211ENST00000568770 PSMG4Q5JS54 123 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms