RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ZNF486Q96H40 463 aaPredicted RBP11.19□□□□□ -0.62
NME3-211ENST00000568561 NARS2Q96I59 477 aaKnown RBP11.19□□□□□ -0.62
NME3-211ENST00000568561 HELTA6NFD8 242 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 FAM25AB3EWG3 89 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 FAM25CB3EWG5 89 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 FAM25GB3EWG6 89 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 RND2P52198 227 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 BSXQ3C1V8 233 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 CENPSQ8N2Z9 138 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 OR13C8Q8NGS7 320 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 OR52I2Q8NH67 350 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 GLMPQ8WWB7 406 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 RRNAD1Q96FB5 475 aaKnown RBP11.18□□□□□ -0.62
NME3-211ENST00000568561 RAB40CQ96S21 281 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 COPZ2Q9P299 210 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 XCL2Q9UBD3 114 aa11.18□□□□□ -0.62
NME3-211ENST00000568561 DEFB131BA0A096LNP1 70 aa11.17□□□□□ -0.62
NME3-211ENST00000568561 A0A1B0GVY2 172 aa11.17□□□□□ -0.62
NME3-211ENST00000568561 SCGB2A1O75556 95 aa11.17□□□□□ -0.62
NME3-211ENST00000568561 ATG12O94817 140 aa11.17□□□□□ -0.62
NME3-211ENST00000568561 IGLC1P0CG04 106 aa11.17□□□□□ -0.62
NME3-211ENST00000568561 UCP1P25874 307 aa11.17□□□□□ -0.62
NME3-211ENST00000568561 SPCS2Q15005 226 aa11.17□□□□□ -0.62
NME3-211ENST00000568561 USF2Q15853 346 aaPredicted RBP11.17□□□□□ -0.62
NME3-211ENST00000568561 PRSS54Q6PEW0 395 aa11.17□□□□□ -0.62
NME3-211ENST00000568561 LHFPL5Q8TAF8 219 aa11.17□□□□□ -0.62
NME3-211ENST00000568561 MARCH1Q8TCQ1 289 aa11.17□□□□□ -0.62
NME3-211ENST00000568561 RNF126Q9BV68 326 aa11.17□□□□□ -0.62
NME3-211ENST00000568561 U3KQE9 123 aa11.17□□□□□ -0.62
NME3-211ENST00000568561 M0R2N4 97 aa11.16□□□□□ -0.62
NME3-211ENST00000568561 NXPH3O95157 252 aa11.16□□□□□ -0.62
NME3-211ENST00000568561 AMBPP02760 352 aa11.16□□□□□ -0.62
NME3-211ENST00000568561 HNRNPCP07910 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
NME3-211ENST00000568561 DHODHQ02127 395 aa11.16□□□□□ -0.62
NME3-211ENST00000568561 SCGB2B2Q4G0G5 96 aa11.16□□□□□ -0.62
NME3-211ENST00000568561 C16orf54Q6UWD8 224 aa11.16□□□□□ -0.62
NME3-211ENST00000568561 ARRDC1Q8N5I2 433 aa11.16□□□□□ -0.62
NME3-211ENST00000568561 CCDC71LQ8N9Z2 235 aa11.16□□□□□ -0.62
NME3-211ENST00000568561 HEYLQ9NQ87 328 aaPredicted RBP11.16□□□□□ -0.62
NME3-211ENST00000568561 FAM90A26D6RGX4 464 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 IL4P05112 153 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 OR5AC1P0C628 307 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 OR10J1P30954 320 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 EIF2B2P49770 351 aaKnown RBP11.15□□□□□ -0.62
NME3-211ENST00000568561 DEFB1P60022 68 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 SPCS3P61009 180 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 FAAP20Q6NZ36 180 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 LINC00336Q6ZUF6 198 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 OR1S2Q8NGQ3 325 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 DYNC2LI1Q8TCX1 351 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 Q8WTZ3 238 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 TMEM170AQ8WVE7 144 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 EXTL2Q9UBQ6 330 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 MUC4Q99102 2169 aa11.15□□□□□ -0.62
NME3-211ENST00000568561 TRAV30A0A087WSZ9 112 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 RPS10-NUDT3A0A1W2PQS6 291 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 RTL8CO15255 209 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 HTR2BP41595 481 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 MEF2DQ14814 521 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 CNPY1Q3B7I2 92 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 GSG1LQ6UXU4 331 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 TERB2Q8NHR7 220 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 ZFAND1Q8TCF1 268 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 ACY3Q96HD9 319 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 ABHD1Q96SE0 405 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 MTFP1Q9UDX5 166 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 CACNG5Q9UF02 275 aa11.14□□□□□ -0.63
NME3-211ENST00000568561 CEBPZOSA8MTT3 80 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 H3BMM0 161 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 IGKV3-20P01619 116 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 EMP1P54849 157 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 FXYD7P58549 80 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 AARDQ4LEZ3 155 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 C2orf83Q53S99 150 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 POM121L12Q8N7R1 296 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 SLC24A4Q8NFF2 622 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 GPR146Q96CH1 333 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 NDUFAF3Q9BU61 184 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 TMEM222Q9H0R3 208 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 NRN1Q9NPD7 142 aa11.13□□□□□ -0.63
NME3-211ENST00000568561 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.13□□□□□ -0.63
NME3-211ENST00000568561 PRSS29PA6NIE9 313 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 CDS2O95674 445 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 RAB3DO95716 219 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 P0DMU3 169 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 FAM231AP0DMU4 169 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 FAM231CP0DMU5 169 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 SLC25A4P12235 298 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 ZNF182P17025 639 aaPredicted RBP11.12□□□□□ -0.63
NME3-211ENST00000568561 TBPP20226 339 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 RORCP51449 518 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 YPEL3P61236 119 aaPredicted RBP11.12□□□□□ -0.63
NME3-211ENST00000568561 SNRPD3P62318 126 aaKnown RBP11.12□□□□□ -0.63
NME3-211ENST00000568561 GDF5OSQ5U4N7 250 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 SIGLEC15Q6ZMC9 328 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 SELENOHQ8IZQ5 122 aaKnown RBP11.12□□□□□ -0.63
NME3-211ENST00000568561 GLYATL2Q8WU03 294 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 NPIPB3Q92617 1050 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 C1QTNF4Q9BXJ3 329 aa11.12□□□□□ -0.63
NME3-211ENST00000568561 NAA60Q9H7X0 242 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms