RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, human

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-222	ENST00000568454	FAM166A	Q6J272	317 aa		13.79	□□□□□ -0.2
TSC2-222	ENST00000568454	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.79	□□□□□ -0.2
TSC2-222	ENST00000568454	TRIP12	Q14669	1992 aa	Predicted RBP	13.79	□□□□□ -0.2
TSC2-222	ENST00000568454	SCN8A	Q9UQD0	1980 aa		13.79	□□□□□ -0.2
TSC2-222	ENST00000568454	SLC25A20	O43772	301 aa		13.79	□□□□□ -0.2
TSC2-222	ENST00000568454	NMS	Q5H8A3	153 aa		13.79	□□□□□ -0.2
TSC2-222	ENST00000568454	TMEM238	C9JI98	176 aa		13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	COL11A1	P12107	1806 aa	Predicted RBP	13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	LAGE3	Q14657	143 aa		13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	IGHV1-2	P23083	117 aa		13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	TMPRSS3	P57727	454 aa		13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	RPRML	Q8N4K4	120 aa		13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	LYL1	P12980	280 aa		13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	STPG1	Q5TH74	334 aa		13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	SEPSECS	Q9HD40	501 aa	Known RBP	13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	CACNA1I	Q9P0X4	2223 aa		13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	EVI2A	P22794	236 aa		13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	TMEM14EP	Q6UXP3	125 aa		13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	HEATR5B	Q9P2D3	2071 aa		13.78	□□□□□ -0.2
TSC2-222	ENST00000568454	GGTLC3	B5MD39	225 aa		13.77	□□□□□ -0.2
TSC2-222	ENST00000568454	CD5L	O43866	347 aa		13.77	□□□□□ -0.2
TSC2-222	ENST00000568454	CD7	P09564	240 aa		13.77	□□□□□ -0.2
TSC2-222	ENST00000568454		M0R2P5	195 aa		13.77	□□□□□ -0.2
TSC2-222	ENST00000568454	POLR2A	P24928	1970 aa	Known RBP	13.77	□□□□□ -0.2
TSC2-222	ENST00000568454	IGHV3OR16-8	A0A075B7F1	116 aa		13.77	□□□□□ -0.21
TSC2-222	ENST00000568454	IMMP1L	Q96LU5	166 aa		13.77	□□□□□ -0.21
TSC2-222	ENST00000568454	SSBP2	P81877	361 aa	Predicted RBP	13.77	□□□□□ -0.21
TSC2-222	ENST00000568454	GTSCR1	Q86UQ5	136 aa		13.77	□□□□□ -0.21
TSC2-222	ENST00000568454	FAM57A	Q8TBR7	257 aa		13.77	□□□□□ -0.21
TSC2-222	ENST00000568454	DLX4	Q92988	240 aa	Predicted RBP	13.77	□□□□□ -0.21
TSC2-222	ENST00000568454	NAA38	Q9BRA0	125 aa	Known RBP	13.77	□□□□□ -0.21
TSC2-222	ENST00000568454	TDGF1	P13385	188 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	ADCYAP1	P18509	176 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	CD300E	Q496F6	205 aa	Predicted RBP	13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	KLF17	Q5JT82	389 aa	Predicted RBP	13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	ZIC4	Q8N9L1	334 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	NEU4	Q8WWR8	484 aa	Predicted RBP	13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	ALPK2	Q86TB3	2170 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	SYS1-DBNDD2	H3BUS1	97 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	CRYGS	P22914	178 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	hDV102S1	A0JD36	115 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	C17orf100	A8MU93	164 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	CD28	P10747	220 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	TRAV5	A0A0B4J249	113 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	IGKV1-12	A0A0C4DH73	117 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	IGKV1D-12	P01611	117 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454	CCL3L1	P16619	93 aa		13.76	□□□□□ -0.21
TSC2-222	ENST00000568454		A0A087X0K7	114 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454	ATP1A1-AS1	Q5TC04	95 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454	LINC01587	Q99440	93 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454	CELA3B	P08861	270 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454	MST1	P26927	711 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454	LCN12	Q6JVE5	192 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454	IGLV3-12	A0A075B6K2	115 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454		A0A0G2JMM0	328 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454		A0A1W2PPB8	328 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454	KIR3DP1	A8MWS1	328 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454		D6R8Y8	96 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454	ATP5J2	P56134	94 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454	TMEM133	Q9H2Q1	129 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454		A8MWP6	167 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454	TMEM42	Q69YG0	159 aa		13.75	□□□□□ -0.21
TSC2-222	ENST00000568454	MORN3	Q6PF18	240 aa	Predicted RBP	13.75	□□□□□ -0.21
TSC2-222	ENST00000568454	GAGE12B	A1L429	117 aa		13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	EREG	O14944	169 aa		13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	DUSP14	O95147	198 aa	Known RBP	13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	C20orf144	Q9BQM9	153 aa		13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	GTSF1L	Q9H1H1	148 aa		13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	FAM27E3	Q08E93	113 aa		13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	KIR3DS1	Q14943	382 aa		13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	SPATA31B1P	Q5VZV4	182 aa		13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	PSG1	P11464	419 aa		13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	COX11	Q9Y6N1	276 aa		13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	XIRP1	Q702N8	1843 aa	Known RBP	13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	COX6B1	P14854	86 aa		13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	RHOG	P84095	191 aa		13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.74	□□□□□ -0.21
TSC2-222	ENST00000568454	IGHV3OR16-10	A0A075B7F0	116 aa		13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	MYOD1	P15172	320 aa		13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	PRTN3	P24158	256 aa		13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	PPIF	P30405	207 aa	Known RBP	13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	HGFAC	Q04756	655 aa		13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	MGST2	Q99735	147 aa		13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	ZNF236	Q9UL36	1845 aa		13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	PLEKHB2	Q96CS7	222 aa		13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	SNRNP200	O75643	2136 aa	Known RBP	13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	TMEM155	Q4W5P6	130 aa		13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	OVOL1	O14753	267 aa		13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	NUP35	Q8NFH5	326 aa		13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	SPANXA1	Q9NS26	97 aa		13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	MRPL14	Q6P1L8	145 aa	Known RBP	13.73	□□□□□ -0.21
TSC2-222	ENST00000568454	IGKV1-5	P01602	117 aa		13.72	□□□□□ -0.21
TSC2-222	ENST00000568454	TCRA	P04437	139 aa		13.72	□□□□□ -0.21
TSC2-222	ENST00000568454	LHX2	P50458	406 aa		13.72	□□□□□ -0.21
TSC2-222	ENST00000568454	FDCSP	Q8NFU4	85 aa		13.72	□□□□□ -0.21
TSC2-222	ENST00000568454	IGKV3D-20	A0A0C4DH25	116 aa		13.72	□□□□□ -0.21
TSC2-222	ENST00000568454	BSPH1	Q075Z2	132 aa		13.72	□□□□□ -0.21
TSC2-222	ENST00000568454	FAM90A2P	Q658T7	463 aa		13.72	□□□□□ -0.21
TSC2-222	ENST00000568454	TNFRSF14	Q92956	283 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms