RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	TMEM190	Q8WZ59	177 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	DAZL	Q92904	295 aa	Known RBP	3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	MMAB	Q96EY8	250 aa	Predicted RBP	3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	GRAMD2B	Q96HH9	432 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	DUX3	Q96PT4	197 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	NRTN	Q99748	197 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	CHRDL1	Q9BU40	450 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	AICDA	Q9GZX7	198 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	TMEM191A	Q9H0A3	160 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	HES4	Q9HCC6	221 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	MED29	Q9NX70	200 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	PEMT	Q9UBM1	199 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	NAT8B	Q9UHF3	227 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	JPT1	Q9UK76	154 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	PLAGL1	Q9UM63	463 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	WASHC3	Q9Y3C0	194 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	HCFC1	P51610	2035 aa		3.93	□□□□□ -1.78
CBFB-208	ENST00000567947	ANKRD17	O75179	2603 aa	Known RBP	3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	FREM3	P0C091	2139 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	INTS1	Q8N201	2190 aa	Known RBP	3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	IGKV1D-42	A0A075B6H8	117 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947		A0A0A6YYD4	124 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	FEZF1	A0PJY2	475 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	C7orf71	A4D174	169 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	ZNF716	A6NP11	495 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	CD300LB	A8K4G0	201 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	ZNF878	C9JN71	531 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947		H0Y980	276 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	C16orf97	H3BN30	126 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947		K7EM74	188 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	FCN1	O00602	326 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	SOCS1	O15524	211 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	XRCC2	O43543	280 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	MPDU1	O75352	247 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	GPR75	O95800	540 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	CA2	P00918	260 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	IGHG3	P01860	377 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	GP1BB	P13224	206 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	AREG	P15514	252 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	EDN2	P20800	178 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	USF1	P22415	310 aa	Predicted RBP	3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	OTX2	P32243	289 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	OR1D4	P47884	311 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	MLF1	P58340	268 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	UBE2G1	P62253	170 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	CX3CL1	P78423	397 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	MRPS34	P82930	218 aa	Known RBP	3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	ZNF90	Q03938	601 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	RPL18	Q07020	188 aa	Known RBP	3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	ZNF726P1	Q15940	193 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	IGFBP7	Q16270	282 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	RPEL1	Q2QD12	228 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	PRICKLE4	Q2TBC4	344 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	ATP1A1-AS1	Q5TC04	95 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	OLIG3	Q7RTU3	272 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	SPATA12	Q7Z6I5	190 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	NFE4	Q86UQ8	179 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	TMEM219	Q86XT9	240 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	SELENOH	Q8IZQ5	122 aa	Known RBP	3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	CA13	Q8N1Q1	262 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	ZNF525	Q8N782	197 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	TMEM178A	Q8NBL3	297 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	NECAP1	Q8NC96	275 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	ZNF439	Q8NDP4	499 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	OR2Z1	Q8NG97	314 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	OR9G4	Q8NGQ1	327 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	OR2K2	Q8NGT1	345 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	OR4A16	Q8NH70	328 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	ATP6V0E2	Q8NHE4	81 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	ZPLD1	Q8TCW7	415 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	C11orf52	Q96A22	123 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	CHCHD1	Q96BP2	118 aa	Known RBP	3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	SNRNP40	Q96DI7	357 aa	Known RBP	3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	C5orf30	Q96GV9	206 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	ARHGAP5-AS1	Q96IT6	56 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	TMEM70	Q9BUB7	260 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	ST6GALNAC5	Q9BVH7	336 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	OR2D2	Q9H210	308 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	KCNK15	Q9H427	330 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	SH2D2A	Q9NP31	389 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	OSTC	Q9NRP0	149 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	BEX4	Q9NWD9	120 aa	Predicted RBP	3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	TAAR3P	Q9P1P4	343 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	KCNS2	Q9ULS6	477 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	AKAP9	Q99996	3911 aa		3.92	□□□□□ -1.78
CBFB-208	ENST00000567947	NCKAP5	O14513	1909 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	CREBBP	Q92793	2442 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	TRAV36DV7	A0A075B6V5	113 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	TRAV26-1	A0A087WT03	109 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947		A0A1B0GTH9	108 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	C11orf94	C9JXX5	98 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947		H7C1C5	153 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947		K7EQM0	130 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	IFNL4	K9M1U5	179 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	OR2J3	O76001	311 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	ZFAND5	O76080	213 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	IGLV3-1	P01715	115 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	TTR	P02766	147 aa		3.91	□□□□□ -1.78
CBFB-208	ENST00000567947	PRB1	P04280	392 aa		3.91	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms