RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 SPAG8Q99932 426 aaPredicted RBP18.8■□□□□ 0.6
FANCA-228ENST00000567943 ZFAND3Q9H8U3 227 aa18.8■□□□□ 0.6
FANCA-228ENST00000567943 IGHV3OR16-13A0A075B7E8 117 aa18.79■□□□□ 0.6
FANCA-228ENST00000567943 TRAV30A0A087WSZ9 112 aa18.79■□□□□ 0.6
FANCA-228ENST00000567943 IGHV3-74A0A0B4J1X5 117 aa18.79■□□□□ 0.6
FANCA-228ENST00000567943 ADAP1O75689 374 aa18.79■□□□□ 0.6
FANCA-228ENST00000567943 IAPPP10997 89 aa18.79■□□□□ 0.6
FANCA-228ENST00000567943 ETFRF1Q6IPR1 90 aa18.79■□□□□ 0.6
FANCA-228ENST00000567943 CITED4Q96RK1 184 aa18.79■□□□□ 0.6
FANCA-228ENST00000567943 RNF2Q99496 336 aa18.79■□□□□ 0.6
FANCA-228ENST00000567943 SPATA25Q9BR10 227 aa18.79■□□□□ 0.6
FANCA-228ENST00000567943 SRD5A3Q9H8P0 318 aa18.79■□□□□ 0.6
FANCA-228ENST00000567943 EDA2RQ9HAV5 297 aa18.79■□□□□ 0.6
FANCA-228ENST00000567943 FAM90A26D6RGX4 464 aa18.78■□□□□ 0.6
FANCA-228ENST00000567943 IGKV1-17P01599 117 aa18.78■□□□□ 0.6
FANCA-228ENST00000567943 IFNA4P05014 189 aa18.78■□□□□ 0.6
FANCA-228ENST00000567943 MUC7Q8TAX7 377 aa18.78■□□□□ 0.6
FANCA-228ENST00000567943 S100ZQ8WXG8 99 aa18.78■□□□□ 0.6
FANCA-228ENST00000567943 C20orf85Q9H1P6 137 aa18.78■□□□□ 0.6
FANCA-228ENST00000567943 C3orf84H3BNL1 204 aa18.77■□□□□ 0.6
FANCA-228ENST00000567943 MED6O75586 246 aa18.77■□□□□ 0.6
FANCA-228ENST00000567943 IGLC1P0CG04 106 aa18.77■□□□□ 0.6
FANCA-228ENST00000567943 OR1S2Q8NGQ3 325 aa18.77■□□□□ 0.6
FANCA-228ENST00000567943 ACY3Q96HD9 319 aa18.77■□□□□ 0.6
FANCA-228ENST00000567943 MAGT1Q9H0U3 335 aa18.77■□□□□ 0.6
FANCA-228ENST00000567943 RETNQ9HD89 108 aa18.77■□□□□ 0.6
FANCA-228ENST00000567943 SACSQ9NZJ4 4579 aa18.76■□□□□ 0.59
FANCA-228ENST00000567943 OR10J1P30954 320 aa18.76■□□□□ 0.59
FANCA-228ENST00000567943 ATP5IP56385 69 aaPredicted RBP18.76■□□□□ 0.59
FANCA-228ENST00000567943 NPIPB3Q92617 1050 aa18.76■□□□□ 0.59
FANCA-228ENST00000567943 LYSTQ99698 3801 aa18.76■□□□□ 0.59
FANCA-228ENST00000567943 MPTX1A8MV57 137 aa18.75■□□□□ 0.59
FANCA-228ENST00000567943 APOHP02749 345 aaPredicted RBP18.75■□□□□ 0.59
FANCA-228ENST00000567943 TCRBP04435 133 aa18.75■□□□□ 0.59
FANCA-228ENST00000567943 BMI1P35226 326 aa18.75■□□□□ 0.59
FANCA-228ENST00000567943 ST8SIA2Q92186 375 aa18.75■□□□□ 0.59
FANCA-228ENST00000567943 PTTG2Q9NZH5 202 aa18.75■□□□□ 0.59
FANCA-228ENST00000567943 IGHV3-66A0A0C4DH42 116 aa18.74■□□□□ 0.59
FANCA-228ENST00000567943 OR4C46A6NHA9 309 aa18.74■□□□□ 0.59
FANCA-228ENST00000567943 SYNGR2O43760 224 aa18.74■□□□□ 0.59
FANCA-228ENST00000567943 IFNA21P01568 189 aa18.74■□□□□ 0.59
FANCA-228ENST00000567943 UBQLN2Q9UHD9 624 aa18.74■□□□□ 0.59
FANCA-228ENST00000567943 PAIP2BQ9ULR5 123 aaKnown RBP18.74■□□□□ 0.59
FANCA-228ENST00000567943 IGKV3-7A0A075B6H7 116 aa18.73■□□□□ 0.59
FANCA-228ENST00000567943 TRAV6A0A075B6T7 132 aa18.73■□□□□ 0.59
FANCA-228ENST00000567943 WRBO00258 174 aa18.73■□□□□ 0.59
FANCA-228ENST00000567943 NPPCP23582 126 aa18.73■□□□□ 0.59
FANCA-228ENST00000567943 CASC10Q5T4H9 136 aa18.73■□□□□ 0.59
FANCA-228ENST00000567943 TCF24Q7RTU0 167 aa18.73■□□□□ 0.59
FANCA-228ENST00000567943 Q8WTZ3 238 aa18.73■□□□□ 0.59
FANCA-228ENST00000567943 CIB3Q96Q77 187 aaPredicted RBP18.73■□□□□ 0.59
FANCA-228ENST00000567943 METTL26Q96S19 204 aa18.73■□□□□ 0.59
FANCA-228ENST00000567943 VSIRQ9H7M9 311 aa18.73■□□□□ 0.59
FANCA-228ENST00000567943 TFPI2P48307 235 aa18.72■□□□□ 0.59
FANCA-228ENST00000567943 YPEL3P61236 119 aaPredicted RBP18.72■□□□□ 0.59
FANCA-228ENST00000567943 RAB11AP62491 216 aa18.72■□□□□ 0.59
FANCA-228ENST00000567943 FAM90A2PQ658T7 463 aa18.72■□□□□ 0.59
FANCA-228ENST00000567943 LILRB2Q8N423 598 aa18.72■□□□□ 0.59
FANCA-228ENST00000567943 FAM110AQ9BQ89 295 aa18.72■□□□□ 0.59
FANCA-228ENST00000567943 GPX4P36969 197 aaPredicted RBP18.71■□□□□ 0.59
FANCA-228ENST00000567943 MITD1Q8WV92 249 aa18.71■□□□□ 0.59
FANCA-228ENST00000567943 NUDT15Q9NV35 164 aa18.71■□□□□ 0.59
FANCA-228ENST00000567943 TBC1D24Q9ULP9 559 aa18.71■□□□□ 0.59
FANCA-228ENST00000567943 TENM2Q9NT68 2774 aa18.7■□□□□ 0.58
FANCA-228ENST00000567943 DFFBO76075 338 aa18.7■□□□□ 0.58
FANCA-228ENST00000567943 RPP30P78346 268 aaKnown RBP18.7■□□□□ 0.58
FANCA-228ENST00000567943 ID3Q02535 119 aa18.7■□□□□ 0.58
FANCA-228ENST00000567943 ZNF846Q147U1 533 aa18.7■□□□□ 0.58
FANCA-228ENST00000567943 ODF3L2Q3SX64 289 aa18.7■□□□□ 0.58
FANCA-228ENST00000567943 GBGT1Q8N5D6 347 aa18.7■□□□□ 0.58
FANCA-228ENST00000567943 SLC35E1Q96K37 410 aa18.7■□□□□ 0.58
FANCA-228ENST00000567943 WDR12Q9GZL7 423 aaKnown RBP18.7■□□□□ 0.58
FANCA-228ENST00000567943 TMEM231Q9H6L2 316 aa18.7■□□□□ 0.58
FANCA-228ENST00000567943 FAM240BA0A1B0GVZ2 78 aa18.69■□□□□ 0.58
FANCA-228ENST00000567943 A0A1W2PS18 150 aa18.69■□□□□ 0.58
FANCA-228ENST00000567943 CD5P06127 495 aa18.69■□□□□ 0.58
FANCA-228ENST00000567943 CRYBB3P26998 211 aa18.69■□□□□ 0.58
FANCA-228ENST00000567943 NKX2-1P43699 371 aaPredicted RBP18.69■□□□□ 0.58
FANCA-228ENST00000567943 POLR2GP62487 172 aaKnown RBP eCLIP18.69■□□□□ 0.58
FANCA-228ENST00000567943 GAMTQ14353 236 aa18.69■□□□□ 0.58
FANCA-228ENST00000567943 OR4D5Q8NGN0 318 aa18.69■□□□□ 0.58
FANCA-228ENST00000567943 BATF3Q9NR55 127 aa18.69■□□□□ 0.58
FANCA-228ENST00000567943 TOMM40O96008 361 aa18.68■□□□□ 0.58
FANCA-228ENST00000567943 RD3LP0DJH9 198 aa18.68■□□□□ 0.58
FANCA-228ENST00000567943 SPANXN5Q5MJ07 72 aa18.68■□□□□ 0.58
FANCA-228ENST00000567943 MZT2BQ6NZ67 158 aa18.68■□□□□ 0.58
FANCA-228ENST00000567943 NARS2Q96I59 477 aaKnown RBP18.68■□□□□ 0.58
FANCA-228ENST00000567943 H3BP45 60 aa18.67■□□□□ 0.58
FANCA-228ENST00000567943 IL4P05112 153 aa18.67■□□□□ 0.58
FANCA-228ENST00000567943 H2AFB2P0C5Z0 115 aa18.67■□□□□ 0.58
FANCA-228ENST00000567943 RPL11P62913 178 aaKnown RBP18.67■□□□□ 0.58
FANCA-228ENST00000567943 PAFAH1B2P68402 229 aa18.67■□□□□ 0.58
FANCA-228ENST00000567943 ASAH1Q13510 395 aa18.67■□□□□ 0.58
FANCA-228ENST00000567943 IAH1Q2TAA2 248 aaPredicted RBP18.67■□□□□ 0.58
FANCA-228ENST00000567943 WFDC3Q8IUB2 231 aa18.67■□□□□ 0.58
FANCA-228ENST00000567943 SEC22CQ9BRL7 303 aa18.67■□□□□ 0.58
FANCA-228ENST00000567943 GGTLC1Q9BX51 225 aa18.67■□□□□ 0.58
FANCA-228ENST00000567943 RYR2Q92736 4967 aa18.67■□□□□ 0.58
FANCA-228ENST00000567943 LOC102724200A0A096LPH7 203 aaPredicted RBP18.66■□□□□ 0.58
FANCA-228ENST00000567943 ZFP92A6NM28 416 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms