RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 HNRNPCP07910 306 aaKnown RBP eCLIP16.41■□□□□ 0.22
CNEP1R1-209ENST00000567712 RND2P52198 227 aa16.41■□□□□ 0.22
CNEP1R1-209ENST00000567712 DEFB1P60022 68 aa16.41■□□□□ 0.22
CNEP1R1-209ENST00000567712 OR13C8Q8NGS7 320 aa16.41■□□□□ 0.22
CNEP1R1-209ENST00000567712 TRAV30A0A087WSZ9 112 aa16.4■□□□□ 0.22
CNEP1R1-209ENST00000567712 H3BMM0 161 aa16.4■□□□□ 0.22
CNEP1R1-209ENST00000567712 AARDQ4LEZ3 155 aa16.4■□□□□ 0.22
CNEP1R1-209ENST00000567712 RNASE10Q5GAN6 216 aaKnown RBP16.4■□□□□ 0.22
CNEP1R1-209ENST00000567712 OR1S2Q8NGQ3 325 aa16.4■□□□□ 0.22
CNEP1R1-209ENST00000567712 NACAE9PAV3 2078 aa16.4■□□□□ 0.22
CNEP1R1-209ENST00000567712 MED14OSP0DP75 135 aa16.39■□□□□ 0.21
CNEP1R1-209ENST00000567712 SPCS3P61009 180 aa16.39■□□□□ 0.21
CNEP1R1-209ENST00000567712 GDF5OSQ5U4N7 250 aa16.39■□□□□ 0.21
CNEP1R1-209ENST00000567712 GSG1LQ6UXU4 331 aa16.39■□□□□ 0.21
CNEP1R1-209ENST00000567712 RRNAD1Q96FB5 475 aaKnown RBP16.39■□□□□ 0.21
CNEP1R1-209ENST00000567712 NARS2Q96I59 477 aaKnown RBP16.39■□□□□ 0.21
CNEP1R1-209ENST00000567712 FUNDC2Q9BWH2 189 aa16.39■□□□□ 0.21
CNEP1R1-209ENST00000567712 COPZ2Q9P299 210 aa16.39■□□□□ 0.21
CNEP1R1-209ENST00000567712 ABCA13Q86UQ4 5058 aa16.39■□□□□ 0.21
CNEP1R1-209ENST00000567712 P0DMU3 169 aa16.38■□□□□ 0.21
CNEP1R1-209ENST00000567712 FAM231AP0DMU4 169 aa16.38■□□□□ 0.21
CNEP1R1-209ENST00000567712 FAM231CP0DMU5 169 aa16.38■□□□□ 0.21
CNEP1R1-209ENST00000567712 OR10J1P30954 320 aa16.38■□□□□ 0.21
CNEP1R1-209ENST00000567712 YPEL3P61236 119 aaPredicted RBP16.38■□□□□ 0.21
CNEP1R1-209ENST00000567712 CENPSQ8N2Z9 138 aa16.38■□□□□ 0.21
CNEP1R1-209ENST00000567712 ARRDC1Q8N5I2 433 aa16.38■□□□□ 0.21
CNEP1R1-209ENST00000567712 MARCH1Q8TCQ1 289 aa16.38■□□□□ 0.21
CNEP1R1-209ENST00000567712 Q8WTZ3 238 aa16.38■□□□□ 0.21
CNEP1R1-209ENST00000567712 ABHD1Q96SE0 405 aa16.38■□□□□ 0.21
CNEP1R1-209ENST00000567712 NDUFAF3Q9BU61 184 aa16.38■□□□□ 0.21
CNEP1R1-209ENST00000567712 MTFP1Q9UDX5 166 aa16.38■□□□□ 0.21
CNEP1R1-209ENST00000567712 BUB3O43684 328 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 ATG12O94817 140 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 IL4P05112 153 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 OR5AC1P0C628 307 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 HTR2BP41595 481 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 FXYD7P58549 80 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 C2orf83Q53S99 150 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 ZNF705AQ6ZN79 300 aaPredicted RBP16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 OR52E5Q8NH55 327 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 TERB2Q8NHR7 220 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 RNASE11Q8TAA1 199 aaKnown RBP16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 GLYATL2Q8WU03 294 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 GPR146Q96CH1 333 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 KRTAP4-5Q9BYR2 181 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 PLA2G2EQ9NZK7 142 aa16.37■□□□□ 0.21
CNEP1R1-209ENST00000567712 FAM25AB3EWG3 89 aa16.36■□□□□ 0.21
CNEP1R1-209ENST00000567712 FAM25CB3EWG5 89 aa16.36■□□□□ 0.21
CNEP1R1-209ENST00000567712 FAM25GB3EWG6 89 aa16.36■□□□□ 0.21
CNEP1R1-209ENST00000567712 CDS2O95674 445 aa16.36■□□□□ 0.21
CNEP1R1-209ENST00000567712 CD74P04233 296 aa16.36■□□□□ 0.21
CNEP1R1-209ENST00000567712 EIF2B2P49770 351 aaKnown RBP16.36■□□□□ 0.21
CNEP1R1-209ENST00000567712 NPIPB3Q92617 1050 aa16.36■□□□□ 0.21
CNEP1R1-209ENST00000567712 RTBDNQ9BSG5 229 aaPredicted RBP16.36■□□□□ 0.21
CNEP1R1-209ENST00000567712 TMEM222Q9H0R3 208 aa16.36■□□□□ 0.21
CNEP1R1-209ENST00000567712 NRN1Q9NPD7 142 aa16.36■□□□□ 0.21
CNEP1R1-209ENST00000567712 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.36■□□□□ 0.21
CNEP1R1-209ENST00000567712 CACNG5Q9UF02 275 aa16.36■□□□□ 0.21
CNEP1R1-209ENST00000567712 A0A087WXM4 84 aa16.35■□□□□ 0.21
CNEP1R1-209ENST00000567712 RPS10-NUDT3A0A1W2PQS6 291 aa16.35■□□□□ 0.21
CNEP1R1-209ENST00000567712 AP2S1P53680 142 aaPredicted RBP16.35■□□□□ 0.21
CNEP1R1-209ENST00000567712 MEF2DQ14814 521 aa16.35■□□□□ 0.21
CNEP1R1-209ENST00000567712 SCGB2B2Q4G0G5 96 aa16.35■□□□□ 0.21
CNEP1R1-209ENST00000567712 FAAP20Q6NZ36 180 aa16.35■□□□□ 0.21
CNEP1R1-209ENST00000567712 SIGLEC15Q6ZMC9 328 aa16.35■□□□□ 0.21
CNEP1R1-209ENST00000567712 SELENOHQ8IZQ5 122 aaKnown RBP16.35■□□□□ 0.21
CNEP1R1-209ENST00000567712 CCDC71LQ8N9Z2 235 aa16.35■□□□□ 0.21
CNEP1R1-209ENST00000567712 ZFAND1Q8TCF1 268 aa16.35■□□□□ 0.21
CNEP1R1-209ENST00000567712 HEYLQ9NQ87 328 aaPredicted RBP16.35■□□□□ 0.21
CNEP1R1-209ENST00000567712 ZNF705FA8MVS1 300 aaPredicted RBP16.34■□□□□ 0.21
CNEP1R1-209ENST00000567712 SCGB2A1O75556 95 aa16.34■□□□□ 0.21
CNEP1R1-209ENST00000567712 ZNF705DP0CH99 300 aaPredicted RBP16.34■□□□□ 0.21
CNEP1R1-209ENST00000567712 ZNF705BP0CI00 300 aaPredicted RBP16.34■□□□□ 0.21
CNEP1R1-209ENST00000567712 HLA-DRB4P13762 266 aa16.34■□□□□ 0.21
CNEP1R1-209ENST00000567712 EMP1P54849 157 aa16.34■□□□□ 0.21
CNEP1R1-209ENST00000567712 LGALS9BQ3B8N2 356 aa16.34■□□□□ 0.21
CNEP1R1-209ENST00000567712 SLC24A4Q8NFF2 622 aa16.34■□□□□ 0.21
CNEP1R1-209ENST00000567712 C1QTNF4Q9BXJ3 329 aa16.34■□□□□ 0.21
CNEP1R1-209ENST00000567712 NAA50Q9GZZ1 169 aaKnown RBP16.34■□□□□ 0.21
CNEP1R1-209ENST00000567712 HLA-DRB4X5D2U9 266 aa16.34■□□□□ 0.21
CNEP1R1-209ENST00000567712 IGLV2-18A0A075B6J9 118 aa16.33■□□□□ 0.2
CNEP1R1-209ENST00000567712 IGKV3-20P01619 116 aa16.33■□□□□ 0.2
CNEP1R1-209ENST00000567712 SLC25A4P12235 298 aa16.33■□□□□ 0.2
CNEP1R1-209ENST00000567712 SNRPD3P62318 126 aaKnown RBP16.33■□□□□ 0.2
CNEP1R1-209ENST00000567712 Q6ZR54 194 aa16.33■□□□□ 0.2
CNEP1R1-209ENST00000567712 TMEM229BQ8NBD8 167 aa16.33■□□□□ 0.2
CNEP1R1-209ENST00000567712 RNASEH2CQ8TDP1 164 aaKnown RBP16.33■□□□□ 0.2
CNEP1R1-209ENST00000567712 WDR12Q9GZL7 423 aaKnown RBP16.33■□□□□ 0.2
CNEP1R1-209ENST00000567712 SEPSECSQ9HD40 501 aaKnown RBP16.33■□□□□ 0.2
CNEP1R1-209ENST00000567712 EXTL2Q9UBQ6 330 aa16.33■□□□□ 0.2
CNEP1R1-209ENST00000567712 TEX13DA0A0J9YY54 714 aaPredicted RBP16.32■□□□□ 0.2
CNEP1R1-209ENST00000567712 TOMM40O96008 361 aa16.32■□□□□ 0.2
CNEP1R1-209ENST00000567712 PSG1P11464 419 aa16.32■□□□□ 0.2
CNEP1R1-209ENST00000567712 TBPP20226 339 aa16.32■□□□□ 0.2
CNEP1R1-209ENST00000567712 NPY1RP25929 384 aa16.32■□□□□ 0.2
CNEP1R1-209ENST00000567712 RORCP51449 518 aa16.32■□□□□ 0.2
CNEP1R1-209ENST00000567712 NUTF2P61970 127 aaKnown RBP16.32■□□□□ 0.2
CNEP1R1-209ENST00000567712 HSPG2P98160 4391 aa16.32■□□□□ 0.2
CNEP1R1-209ENST00000567712 FAM219AQ8IW50 185 aa16.32■□□□□ 0.2
CNEP1R1-209ENST00000567712 OR51G1Q8NGK1 321 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms