RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 PILRBQ9UKJ0 227 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 LSM4Q9Y4Z0 139 aaKnown RBP10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 CD5LO43866 347 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 VKORC1Q9BQB6 163 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 ZNF71Q9NQZ8 489 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 FOXA2Q9Y261 457 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 A0A1B0GWJ7 208 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 TDGF1P13385 188 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 FAM74A4Q5TZK3 123 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 UNQ6494/PRO21346Q6UXR6 183 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 NUP35Q8NFH5 326 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 OR9G4Q8NGQ1 327 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 FBXL15Q9H469 300 aa10.3□□□□□ -0.76
CSPG4P13-202ENST00000567704 IGHV3OR16-8A0A075B7F1 116 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 YPEL1O60688 119 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 CECR9P0C854 216 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 CKS1BP61024 79 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 Q0VG73 95 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 GAGE1Q13065 139 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 TMEM30BQ3MIR4 351 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 DEFB124Q8NES8 71 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 YPEL2Q96QA6 119 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 MRPL27Q9P0M9 148 aaKnown RBP10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 C1orf210Q8IVY1 113 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 HEATR1Q9H583 2144 aaKnown RBP10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 ITGB1BP1O14713 200 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 DPM2O94777 84 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 NTF4P34130 210 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 SCN5AQ14524 2016 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 SAP25Q8TEE9 199 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 GP6Q9HCN6 339 aa10.29□□□□□ -0.76
CSPG4P13-202ENST00000567704 IGHV3-49A0A0A0MS15 119 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 FXYD7P58549 80 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 KIR3DS1Q14943 382 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 OTORQ9NRC9 128 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 IGLV3-32A0A0A0MS00 114 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 TRIP6Q15654 476 aaKnown RBP10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 RNFT1Q5M7Z0 435 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 Q6ZT83 130 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 OR5AN1Q8NGI8 311 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 C1orf147Q96MC9 270 aaPredicted RBP10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 FOXG1P55316 489 aaPredicted RBP10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 LIME1Q9H400 295 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 TCRBV4S1A1TA0A5B7 111 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 LINC00205P59089 165 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 ERVK11-1P61568 191 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 ZNF726P1Q15940 193 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 OR10W1Q8NGF6 305 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 IMMP1LQ96LU5 166 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 LY96Q9Y6Y9 160 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 DOCK7Q96N67 2140 aa10.28□□□□□ -0.76
CSPG4P13-202ENST00000567704 E9PLN8 166 aa10.27□□□□□ -0.76
CSPG4P13-202ENST00000567704 HOXA3O43365 443 aaPredicted RBP10.27□□□□□ -0.76
CSPG4P13-202ENST00000567704 IGHV3-23P01764 117 aa10.27□□□□□ -0.76
CSPG4P13-202ENST00000567704 CLPSP04118 112 aa10.27□□□□□ -0.76
CSPG4P13-202ENST00000567704 LHX2P50458 406 aa10.27□□□□□ -0.76
CSPG4P13-202ENST00000567704 STPG4Q8N801 248 aa10.27□□□□□ -0.76
CSPG4P13-202ENST00000567704 SIP14410 1827 aa10.27□□□□□ -0.76
CSPG4P13-202ENST00000567704 IQCF6A8MYZ5 107 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 PRCDQ00LT1 54 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 VCX2Q9H322 139 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 PSG8Q9UQ74 426 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 TRAV3A0A0B4J244 114 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 PSPNO60542 156 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 FTH1P19P0C7X4 201 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 PAX9P55771 341 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 PAX2Q02962 417 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 SH2D7A6NKC9 451 aaPredicted RBP10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 C15orf62A8K5M9 175 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 AHRRA9YTQ3 701 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 NPIPB11E5RHQ5 1161 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 RASL11AQ6T310 242 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 GTSCR1Q86UQ5 136 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 CRIPAKQ8N1N5 446 aa10.27□□□□□ -0.77
CSPG4P13-202ENST00000567704 IGHV3-66A0A0C4DH42 116 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 PPIFP30405 207 aaKnown RBP10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 ID1P41134 155 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 IGLV3-12A0A075B6K2 115 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 PPIAL4CA0A0B4J2A2 164 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 IGKCP01834 107 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 PPIAL4GP0DN37 164 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 EVI2AP22794 236 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 WIPF3A6NGB9 483 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 NPIPB6E9PJ23 425 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 LINC00479Q96M42 142 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 ANAPC10Q9UM13 185 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 IL15RAQ13261 267 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 TMEM42Q69YG0 159 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 DNASE2BQ8WZ79 361 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 JMJD8Q96S16 334 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 CYSLTR1Q9Y271 337 aa10.26□□□□□ -0.77
CSPG4P13-202ENST00000567704 ATP1A1-AS1Q5TC04 95 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 C20orf204Q6ZNR8 217 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 CACNA1HO95180 2353 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 CADP27708 2225 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 FAM231BA6NCW3 169 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 NKX2-8O15522 239 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 CCL3L1P16619 93 aa10.25□□□□□ -0.77
CSPG4P13-202ENST00000567704 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms