RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 LINC00869P0C866 280 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 RPL29P47914 159 aaKnown RBP13.85□□□□□ -0.19
HERC2-208ENST00000566635 OR10G4Q8NGN3 311 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 OR10G9Q8NGN4 311 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 OR10G7Q8NGN6 311 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 SLC25A22Q9H936 323 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 SLC39A9Q9NUM3 307 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 IGF1P05019 195 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 CYP2G1PQ6ZSU1 146 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 LYPD6BQ8NI32 183 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 TMEM68Q96MH6 324 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 KCNIP2Q9NS61 270 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 ZNF355PQ9NSJ1 428 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 TCRBV4S1A1TA0A5B7 111 aa13.84□□□□□ -0.19
HERC2-208ENST00000566635 LY6G6DO95868 133 aa13.84□□□□□ -0.19
HERC2-208ENST00000566635 ACOT6Q3I5F7 207 aaPredicted RBP13.84□□□□□ -0.19
HERC2-208ENST00000566635 SPSB3Q6PJ21 355 aa13.84□□□□□ -0.19
HERC2-208ENST00000566635 FBXL7Q9UJT9 491 aa13.84□□□□□ -0.19
HERC2-208ENST00000566635 PCP4L1A6NKN8 68 aa13.84□□□□□ -0.19
HERC2-208ENST00000566635 HMGB3O15347 200 aaKnown RBP13.84□□□□□ -0.19
HERC2-208ENST00000566635 CYB5BO43169 146 aa13.84□□□□□ -0.19
HERC2-208ENST00000566635 IGHV3-23P01764 117 aa13.84□□□□□ -0.19
HERC2-208ENST00000566635 MBP02144 154 aa13.84□□□□□ -0.19
HERC2-208ENST00000566635 HNF1AP20823 631 aa13.84□□□□□ -0.19
HERC2-208ENST00000566635 ATRAIDQ6UW56 229 aa13.84□□□□□ -0.19
HERC2-208ENST00000566635 OR4X1Q8NH49 305 aa13.84□□□□□ -0.19
HERC2-208ENST00000566635 SFT2D1Q8WV19 159 aa13.84□□□□□ -0.19
HERC2-208ENST00000566635 BAHCC1Q9P281 2608 aa13.83□□□□□ -0.2
HERC2-208ENST00000566635 NUPL2O15504 423 aaKnown RBP13.83□□□□□ -0.2
HERC2-208ENST00000566635 FGF8P55075 233 aaPredicted RBP13.83□□□□□ -0.2
HERC2-208ENST00000566635 LCN15Q6UWW0 184 aa13.83□□□□□ -0.2
HERC2-208ENST00000566635 MS4A10Q96PG2 267 aa13.83□□□□□ -0.2
HERC2-208ENST00000566635 CCL20P78556 96 aa13.82□□□□□ -0.2
HERC2-208ENST00000566635 RHOGP84095 191 aa13.82□□□□□ -0.2
HERC2-208ENST00000566635 THYN1Q9P016 225 aa13.82□□□□□ -0.2
HERC2-208ENST00000566635 F8W735 103 aaPredicted RBP13.82□□□□□ -0.2
HERC2-208ENST00000566635 AP4M1O00189 453 aa13.82□□□□□ -0.2
HERC2-208ENST00000566635 IGLC1P0CG04 106 aa13.82□□□□□ -0.2
HERC2-208ENST00000566635 HIST1H1BP16401 226 aaKnown RBP13.82□□□□□ -0.2
HERC2-208ENST00000566635 TRGV9Q99603 122 aa13.82□□□□□ -0.2
HERC2-208ENST00000566635 TRBV9A0A0B4J1U6 114 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 MAP1LC3B2A6NCE7 125 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 CLN5O75503 358 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 KLK9Q2XQG4 91 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 C15orf32Q32M92 178 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 TIGITQ495A1 244 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 IL34Q6ZMJ4 242 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 MAP1LC3BQ9GZQ8 125 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 KLK9Q9UKQ9 250 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 MTORP42345 2549 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 CTXND1A0A1B0GTU2 59 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 CDC34P49427 236 aaPredicted RBP13.81□□□□□ -0.2
HERC2-208ENST00000566635 SRSF3P84103 164 aaKnown RBP13.81□□□□□ -0.2
HERC2-208ENST00000566635 SPATA31B1PQ5VZV4 182 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 ACTR3CQ9C0K3 210 aaPredicted RBP13.81□□□□□ -0.2
HERC2-208ENST00000566635 C21orf62Q9NYP8 219 aa13.81□□□□□ -0.2
HERC2-208ENST00000566635 DNAJC9-AS1A6NH13 148 aa13.8□□□□□ -0.2
HERC2-208ENST00000566635 PPIFP30405 207 aaKnown RBP13.8□□□□□ -0.2
HERC2-208ENST00000566635 RBMS3Q6XE24 437 aaKnown RBP13.8□□□□□ -0.2
HERC2-208ENST00000566635 MBD3L1Q8WWY6 194 aa13.8□□□□□ -0.2
HERC2-208ENST00000566635 RAB24Q969Q5 203 aa13.8□□□□□ -0.2
HERC2-208ENST00000566635 ZNF702PQ9H963 129 aa13.8□□□□□ -0.2
HERC2-208ENST00000566635 TMEM160Q9NX00 188 aa13.8□□□□□ -0.2
HERC2-208ENST00000566635 DOK5Q9P104 306 aa13.8□□□□□ -0.2
HERC2-208ENST00000566635 HIVEP1P15822 2718 aa13.8□□□□□ -0.2
HERC2-208ENST00000566635 SEC14L6B5MCN3 397 aa13.79□□□□□ -0.2
HERC2-208ENST00000566635 IGKV1-17P01599 117 aa13.79□□□□□ -0.2
HERC2-208ENST00000566635 APOC3P02656 99 aa13.79□□□□□ -0.2
HERC2-208ENST00000566635 Q56UQ5 140 aa13.79□□□□□ -0.2
HERC2-208ENST00000566635 Q71RC1 249 aaPredicted RBP13.79□□□□□ -0.2
HERC2-208ENST00000566635 TMEM231Q9H6L2 316 aa13.79□□□□□ -0.2
HERC2-208ENST00000566635 SEPSECSQ9HD40 501 aaKnown RBP13.79□□□□□ -0.2
HERC2-208ENST00000566635 ESM1Q9NQ30 184 aa13.79□□□□□ -0.2
HERC2-208ENST00000566635 MFAP4P55083 255 aa13.79□□□□□ -0.2
HERC2-208ENST00000566635 CFHR3Q02985 330 aa13.79□□□□□ -0.2
HERC2-208ENST00000566635 NECAP1Q8NC96 275 aa13.79□□□□□ -0.2
HERC2-208ENST00000566635 NPFFR1Q9GZQ6 430 aa13.79□□□□□ -0.2
HERC2-208ENST00000566635 SAV1Q9H4B6 383 aaPredicted RBP13.79□□□□□ -0.2
HERC2-208ENST00000566635 PSMB11A5LHX3 300 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 FAM74A7A6NL05 159 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 GNG7O60262 68 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 HBE1P02100 147 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 SELENOTP62341 195 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 FAM74A3Q4VXF1 159 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 TMEM86BQ8N661 226 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 TMEM37Q8WXS4 190 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 PRSS22Q9GZN4 317 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 TRAV1-1A0A0B4J248 108 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 A0A1W2PPV4 95 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 RAB19A4D1S5 217 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 OR2T8A6NH00 312 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 TRGV3P03979 118 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 NPBWR1P48145 328 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 VN1R17PQ8TDU5 208 aa13.78□□□□□ -0.2
HERC2-208ENST00000566635 NKX6-2Q9C056 277 aaPredicted RBP13.78□□□□□ -0.2
HERC2-208ENST00000566635 SETXQ7Z333 2677 aaKnown RBP13.78□□□□□ -0.2
HERC2-208ENST00000566635 NUDT19A8MXV4 375 aa13.77□□□□□ -0.21
HERC2-208ENST00000566635 PSG1P11464 419 aa13.77□□□□□ -0.21
HERC2-208ENST00000566635 CD99P14209 185 aa13.77□□□□□ -0.21
HERC2-208ENST00000566635 SRD5A1P18405 259 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms