RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 SPTBN2O15020 2390 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 IGHV3-72A0A0B4J1Y9 119 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 A0A1W2PN81 502 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 PSMB11A5LHX3 300 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 PEX7O00628 323 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 SUB1P53999 127 aaKnown RBP eCLIP11.51□□□□□ -0.57
CDH1-209ENST00000566510 BPIFB3P59826 476 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 PATE2Q6UY27 113 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 ZNF329Q86UD4 541 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 OR4B1Q8NGF8 309 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 OR5AN1Q8NGI8 311 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 OR1L4Q8NGR5 311 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 TSKUQ8WUA8 353 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 SSBP4Q9BWG4 385 aaPredicted RBP11.51□□□□□ -0.57
CDH1-209ENST00000566510 K7EM74 188 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 MOSP00540 346 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 GPR6P46095 362 aaPredicted RBP11.51□□□□□ -0.57
CDH1-209ENST00000566510 UBE2G1P62253 170 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 TMEM30BQ3MIR4 351 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 HCP5Q6MZN7 132 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 NUDT10Q8NFP7 164 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 OR1B1Q8NGR6 318 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 NUDT11Q96G61 164 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 MRPL36Q9P0J6 103 aaKnown RBP11.51□□□□□ -0.57
CDH1-209ENST00000566510 SSUH2Q9Y2M2 353 aa11.51□□□□□ -0.57
CDH1-209ENST00000566510 AKAP13Q12802 2813 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 IGHV3-21A0A0B4J1V1 117 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 TCRBV4S1A1TA0A5B7 111 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 C3orf79P0CE67 100 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 C3orf36Q3SXR2 165 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 TMEM177Q53S58 311 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 TPSG1Q9NRR2 321 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 DPRXA6NFQ7 191 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 C17orf100A8MU93 164 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 TFPI2P48307 235 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 TBR1Q16650 682 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 LYPD2Q6UXB3 125 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 NUP35Q8NFH5 326 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 VSTM2AQ8TAG5 236 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 TMEM208Q9BTX3 173 aa11.5□□□□□ -0.57
CDH1-209ENST00000566510 ANKRD11Q6UB99 2663 aaPredicted RBP11.49□□□□□ -0.57
CDH1-209ENST00000566510 PPIAL4EA0A075B759 164 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 CGB1A6NKQ9 187 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 PPIAL4DF5H284 164 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 CEACAM4O75871 244 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 SLC25A5P05141 298 aaKnown RBP11.49□□□□□ -0.57
CDH1-209ENST00000566510 PPIAL4FP0DN26 164 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 MEF2CQ06413 473 aaPredicted RBP11.49□□□□□ -0.57
CDH1-209ENST00000566510 Q8N976 141 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 RITA1Q96K30 269 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 TXN2Q99757 166 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 PPIAL4AQ9Y536 164 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 H3BTX0 84 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 CORTO00230 105 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 NDUFB3O43676 98 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 HSBP1O75506 76 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 FCN3O75636 299 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 MMDQ15546 238 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 ADIPOQQ15848 244 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 PDPNQ86YL7 162 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 TMEM167AQ8TBQ9 72 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 C18orf32Q8TCD1 76 aa11.49□□□□□ -0.57
CDH1-209ENST00000566510 HIGD1CA8MV81 97 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 PRB3Q04118 309 aaPredicted RBP11.48□□□□□ -0.57
CDH1-209ENST00000566510 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 NIT1Q86X76 327 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 FXYD5Q96DB9 178 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 WASHC3Q9Y3C0 194 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 IGKV1D-37A0A075B6S9 117 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 PGPA6NDG6 321 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 BSPH1Q075Z2 132 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 TNXAQ16473 311 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 LRRC10Q5BKY1 277 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 LCN12Q6JVE5 192 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 RNASEKQ6P5S7 137 aaKnown RBP11.48□□□□□ -0.57
CDH1-209ENST00000566510 OR2D3Q8NGH3 330 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 GRAMD2BQ96HH9 432 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 LPAR2Q9HBW0 351 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 TNFRSF19Q9NS68 423 aa11.48□□□□□ -0.57
CDH1-209ENST00000566510 PRRX1P54821 245 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 GDF5OSQ5U4N7 250 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 RUSC1-AS1Q66K80 236 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 Q6ZN92 141 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 SPACA3Q8IXA5 215 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 A0A1W2PPI3 338 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 C16orf97H3BN30 126 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 VMA21Q3ZAQ7 101 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 LEMD1Q68G75 181 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 Q6ZS92 163 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 NUP37Q8NFH4 326 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 TMEM186Q96B77 213 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 GOLT1BQ9Y3E0 138 aa11.47□□□□□ -0.57
CDH1-209ENST00000566510 M0R2Z0 102 aa11.46□□□□□ -0.57
CDH1-209ENST00000566510 DLEU1O43261 78 aa11.46□□□□□ -0.57
CDH1-209ENST00000566510 CRYABP02511 175 aaKnown RBP11.46□□□□□ -0.57
CDH1-209ENST00000566510 NPSP0C0P6 89 aa11.46□□□□□ -0.57
CDH1-209ENST00000566510 HIST1H1EP10412 219 aaKnown RBP11.46□□□□□ -0.57
CDH1-209ENST00000566510 CEACAM8P31997 349 aaPredicted RBP11.46□□□□□ -0.57
CDH1-209ENST00000566510 DLX1P56177 255 aa11.46□□□□□ -0.57
CDH1-209ENST00000566510 MAJINQ3KP22 176 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms