RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TMEM187Q14656 261 aa13.39□□□□□ -0.27
USB1-213ENST00000566292 RBMS2Q15434 407 aaKnown RBP13.39□□□□□ -0.27
USB1-213ENST00000566292 SLC24A4Q8NFF2 622 aa13.39□□□□□ -0.27
USB1-213ENST00000566292 STXBP6Q8NFX7 210 aa13.39□□□□□ -0.27
USB1-213ENST00000566292 PHLDA1Q8WV24 401 aaPredicted RBP13.39□□□□□ -0.27
USB1-213ENST00000566292 RABL2AQ9UBK7 228 aaPredicted RBP13.39□□□□□ -0.27
USB1-213ENST00000566292 RABL2BQ9UNT1 228 aa13.39□□□□□ -0.27
USB1-213ENST00000566292 KLK5Q9Y337 293 aaPredicted RBP13.39□□□□□ -0.27
USB1-213ENST00000566292 U3KQE9 123 aa13.39□□□□□ -0.27
USB1-213ENST00000566292 CEBPZOSA8MTT3 80 aa13.38□□□□□ -0.27
USB1-213ENST00000566292 SCGB2A1O75556 95 aa13.38□□□□□ -0.27
USB1-213ENST00000566292 TMBIM6P55061 237 aa13.38□□□□□ -0.27
USB1-213ENST00000566292 OR1S2Q8NGQ3 325 aa13.38□□□□□ -0.27
USB1-213ENST00000566292 RNASEH2CQ8TDP1 164 aaKnown RBP13.38□□□□□ -0.27
USB1-213ENST00000566292 BCL7BQ9BQE9 202 aa13.38□□□□□ -0.27
USB1-213ENST00000566292 C11orf68Q9H3H3 251 aaKnown RBP13.38□□□□□ -0.27
USB1-213ENST00000566292 SLC25A4P12235 298 aa13.37□□□□□ -0.27
USB1-213ENST00000566292 NANOS2P60321 138 aaKnown RBP13.37□□□□□ -0.27
USB1-213ENST00000566292 STHQ8IWL8 128 aa13.37□□□□□ -0.27
USB1-213ENST00000566292 DCANP1Q8TF63 244 aa13.37□□□□□ -0.27
USB1-213ENST00000566292 IL22RA2Q969J5 263 aa13.37□□□□□ -0.27
USB1-213ENST00000566292 GRAMD2BQ96HH9 432 aa13.37□□□□□ -0.27
USB1-213ENST00000566292 SOSTQ9BQB4 213 aa13.37□□□□□ -0.27
USB1-213ENST00000566292 SLIRPQ9GZT3 109 aaKnown RBP13.37□□□□□ -0.27
USB1-213ENST00000566292 FRAS1Q86XX4 4008 aa13.37□□□□□ -0.27
USB1-213ENST00000566292 DEFB4AO15263 64 aa13.36□□□□□ -0.27
USB1-213ENST00000566292 GIG44P09565 113 aaPredicted RBP13.36□□□□□ -0.27
USB1-213ENST00000566292 ZNF688P0C7X2 276 aa13.36□□□□□ -0.27
USB1-213ENST00000566292 SULT1A3P0DMM9 295 aa13.36□□□□□ -0.27
USB1-213ENST00000566292 SULT1A4P0DMN0 295 aa13.36□□□□□ -0.27
USB1-213ENST00000566292 NPY1RP25929 384 aa13.36□□□□□ -0.27
USB1-213ENST00000566292 OR10J1P30954 320 aa13.36□□□□□ -0.27
USB1-213ENST00000566292 YPEL3P61236 119 aaPredicted RBP13.36□□□□□ -0.27
USB1-213ENST00000566292 SUPT4H1P63272 117 aaKnown RBP13.36□□□□□ -0.27
USB1-213ENST00000566292 NMSQ5H8A3 153 aa13.36□□□□□ -0.27
USB1-213ENST00000566292 TRPT1Q86TN4 253 aaKnown RBP13.36□□□□□ -0.27
USB1-213ENST00000566292 NARS2Q96I59 477 aaKnown RBP13.36□□□□□ -0.27
USB1-213ENST00000566292 RSL24D1Q9UHA3 163 aaKnown RBP13.36□□□□□ -0.27
USB1-213ENST00000566292 SCP2D1Q9UJQ7 156 aa13.36□□□□□ -0.27
USB1-213ENST00000566292 KNCNA6PVL3 124 aa13.35□□□□□ -0.27
USB1-213ENST00000566292 HNRNPCP07910 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
USB1-213ENST00000566292 TNFSF8P32971 234 aa13.35□□□□□ -0.27
USB1-213ENST00000566292 C16orf54Q6UWD8 224 aa13.35□□□□□ -0.27
USB1-213ENST00000566292 C11orf45Q8TAV5 145 aa13.35□□□□□ -0.27
USB1-213ENST00000566292 Q8WTZ3 238 aa13.35□□□□□ -0.27
USB1-213ENST00000566292 GLMPQ8WWB7 406 aa13.35□□□□□ -0.27
USB1-213ENST00000566292 NPIPB3Q92617 1050 aa13.35□□□□□ -0.27
USB1-213ENST00000566292 KCNIP3Q9Y2W7 256 aa13.35□□□□□ -0.27
USB1-213ENST00000566292 H3BMQ9 156 aa13.34□□□□□ -0.27
USB1-213ENST00000566292 USF2Q15853 346 aaPredicted RBP13.34□□□□□ -0.27
USB1-213ENST00000566292 LYZL2Q7Z4W2 148 aa13.34□□□□□ -0.27
USB1-213ENST00000566292 MCUBQ9NWR8 336 aa13.34□□□□□ -0.27
USB1-213ENST00000566292 FBXL17Q9UF56 701 aa13.34□□□□□ -0.27
USB1-213ENST00000566292 A0A0B4J2A0 478 aa13.33□□□□□ -0.28
USB1-213ENST00000566292 IL4P05112 153 aa13.33□□□□□ -0.28
USB1-213ENST00000566292 AKR1C4P17516 323 aa13.33□□□□□ -0.28
USB1-213ENST00000566292 C4BPBP20851 252 aa13.33□□□□□ -0.28
USB1-213ENST00000566292 CCR6P51684 374 aa13.33□□□□□ -0.28
USB1-213ENST00000566292 ETFRF1Q6IPR1 90 aa13.33□□□□□ -0.28
USB1-213ENST00000566292 Q8NAQ8 132 aa13.33□□□□□ -0.28
USB1-213ENST00000566292 ACY3Q96HD9 319 aa13.33□□□□□ -0.28
USB1-213ENST00000566292 SCGB3A2Q96PL1 93 aa13.33□□□□□ -0.28
USB1-213ENST00000566292 HSPB7Q9UBY9 170 aa13.33□□□□□ -0.28
USB1-213ENST00000566292 SHPKQ9UHJ6 478 aa13.33□□□□□ -0.28
USB1-213ENST00000566292 HELTA6NFD8 242 aa13.32□□□□□ -0.28
USB1-213ENST00000566292 FABP12A6NFH5 140 aa13.32□□□□□ -0.28
USB1-213ENST00000566292 TOMM40O96008 361 aa13.32□□□□□ -0.28
USB1-213ENST00000566292 IFNA10P01566 189 aa13.32□□□□□ -0.28
USB1-213ENST00000566292 DHRS2Q13268 280 aa13.32□□□□□ -0.28
USB1-213ENST00000566292 SMCO1Q147U7 214 aa13.32□□□□□ -0.28
USB1-213ENST00000566292 NOXA1Q86UR1 476 aa13.32□□□□□ -0.28
USB1-213ENST00000566292 DTD1Q8TEA8 209 aa13.32□□□□□ -0.28
USB1-213ENST00000566292 MFFQ9GZY8 342 aa13.32□□□□□ -0.28
USB1-213ENST00000566292 RBKSQ9H477 322 aa13.32□□□□□ -0.28
USB1-213ENST00000566292 CACFD1Q9UGQ2 172 aa13.32□□□□□ -0.28
USB1-213ENST00000566292 U3KQ87 197 aa13.32□□□□□ -0.28
USB1-213ENST00000566292 SPP1P10451 314 aa13.31□□□□□ -0.28
USB1-213ENST00000566292 EIF2B2P49770 351 aaKnown RBP13.31□□□□□ -0.28
USB1-213ENST00000566292 ACTL10Q5JWF8 245 aa13.31□□□□□ -0.28
USB1-213ENST00000566292 MORN3Q6PF18 240 aaPredicted RBP13.31□□□□□ -0.28
USB1-213ENST00000566292 RPP25LQ8N5L8 163 aaKnown RBP13.31□□□□□ -0.28
USB1-213ENST00000566292 MCFD2Q8NI22 146 aa13.31□□□□□ -0.28
USB1-213ENST00000566292 RBMY1A1P0DJD3 496 aaKnown RBP13.3□□□□□ -0.28
USB1-213ENST00000566292 RBMY1CP0DJD4 496 aa13.3□□□□□ -0.28
USB1-213ENST00000566292 RD3LP0DJH9 198 aa13.3□□□□□ -0.28
USB1-213ENST00000566292 PSG1P11464 419 aa13.3□□□□□ -0.28
USB1-213ENST00000566292 KLF9Q13886 244 aaPredicted RBP13.3□□□□□ -0.28
USB1-213ENST00000566292 RBMY1FQ15415 496 aaKnown RBP13.3□□□□□ -0.28
USB1-213ENST00000566292 PSMG4Q5JS54 123 aa13.3□□□□□ -0.28
USB1-213ENST00000566292 LGALS9CQ6DKI2 356 aa13.3□□□□□ -0.28
USB1-213ENST00000566292 LGI3Q8N145 548 aa13.3□□□□□ -0.28
USB1-213ENST00000566292 TRIM63Q969Q1 353 aa13.3□□□□□ -0.28
USB1-213ENST00000566292 RAB40CQ96S21 281 aa13.3□□□□□ -0.28
USB1-213ENST00000566292 VPS13DQ5THJ4 4388 aa13.3□□□□□ -0.28
USB1-213ENST00000566292 IGHV4-28A0A0C4DH34 117 aa13.29□□□□□ -0.28
USB1-213ENST00000566292 ZNF705EA8MWA4 302 aaPredicted RBP13.29□□□□□ -0.28
USB1-213ENST00000566292 BUB3O43684 328 aa13.29□□□□□ -0.28
USB1-213ENST00000566292 NOL3O60936 208 aaKnown RBP13.29□□□□□ -0.28
USB1-213ENST00000566292 DEDDO75618 318 aa13.29□□□□□ -0.28
USB1-213ENST00000566292 IFNA4P05014 189 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms