RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 SUB1P53999 127 aaKnown RBP eCLIP6.22□□□□□ -1.41
CAPN3-213ENST00000565173 TCTAP57738 103 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 SSBP1Q04837 148 aaKnown RBP6.22□□□□□ -1.41
CAPN3-213ENST00000565173 ZNF79Q15937 498 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 STEAP1BQ6NZ63 245 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 STHQ8IWL8 128 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 SLC35G3Q8N808 338 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 CSNK1G2-AS1Q8NCQ2 148 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 TERB2Q8NHR7 220 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 GRAMD2BQ96HH9 432 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 TMEM231Q9H6L2 316 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 RABAC1Q9UI14 185 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 X6R8D5 127 aa6.22□□□□□ -1.41
CAPN3-213ENST00000565173 AGRNO00468 2067 aa6.21□□□□□ -1.41
CAPN3-213ENST00000565173 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.42
CAPN3-213ENST00000565173 ELOA3CA0A087WX78 387 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-213ENST00000565173 IGHV4-28A0A0C4DH34 117 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 A0A1W2PS18 150 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 KNCNA6PVL3 124 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 IGLL5B9A064 214 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 CDS2O95674 445 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 AKAIN1P0CW23 69 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 OPRK1P41145 380 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 P2RY1P47900 373 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 MEF2DQ14814 521 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 TIGITQ495A1 244 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 SCGB2B2Q4G0G5 96 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 FAAP20Q6NZ36 180 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 MORN3Q6PF18 240 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-213ENST00000565173 OR13C8Q8NGS7 320 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 OR52E5Q8NH55 327 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 LHFPL5Q8TAF8 219 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 ZFAND1Q8TCF1 268 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 MARCH1Q8TCQ1 289 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 GLYATL2Q8WU03 294 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 TMEM170AQ8WVE7 144 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 METTL26Q96S19 204 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 RTBDNQ9BSG5 229 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-213ENST00000565173 PTTG2Q9NZH5 202 aa6.21□□□□□ -1.42
CAPN3-213ENST00000565173 TRAV30A0A087WSZ9 112 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 ANKRD20A5PA0PJZ0 165 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 DISC1C4P0D8 188 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 C11orf94C9JXX5 98 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 B3GALNT1O75752 331 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 ATG12O94817 140 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 ZNF688P0C7X2 276 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 IGLC1P0CG04 106 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 SPP1P10451 314 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 MIFP14174 115 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 HLA-DMBP28068 263 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 INPP1P49441 399 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 HOXA1P49639 335 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-213ENST00000565173 SPCS3P61009 180 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 TRIM16LQ309B1 348 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 C2orf83Q53S99 150 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 TMEM41BQ5BJD5 291 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 TRIQKQ629K1 86 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 PRSS54Q6PEW0 395 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 C16orf54Q6UWD8 224 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 TOMM5Q8N4H5 51 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 STXBP6Q8NFX7 210 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 OR4C16Q8NGL9 310 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 GLMPQ8WWB7 406 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 TRIM63Q969Q1 353 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 TMEM230Q96A57 120 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 RRNAD1Q96FB5 475 aaKnown RBP6.2□□□□□ -1.42
CAPN3-213ENST00000565173 RAB40CQ96S21 281 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 PDCD10Q9BUL8 212 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 SRRQ9GZT4 340 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 TMEM222Q9H0R3 208 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-213ENST00000565173 MCUBQ9NWR8 336 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 COPZ2Q9P299 210 aa6.2□□□□□ -1.42
CAPN3-213ENST00000565173 TEX13DA0A0J9YY54 714 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-213ENST00000565173 NXPH3O95157 252 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 OR5AC1P0C628 307 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 FAUP35544 74 aaKnown RBP6.19□□□□□ -1.42
CAPN3-213ENST00000565173 HTR2BP41595 481 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 AP3S2P59780 193 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 YPEL3P61236 119 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-213ENST00000565173 DHODHQ02127 395 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 KLF9Q13886 244 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-213ENST00000565173 USF2Q15853 346 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-213ENST00000565173 ACTL10Q5JWF8 245 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 Q6ZTC4 211 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 FAM219AQ8IW50 185 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 SELENOHQ8IZQ5 122 aaKnown RBP6.19□□□□□ -1.42
CAPN3-213ENST00000565173 CCDC71LQ8N9Z2 235 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 RNASEH2CQ8TDP1 164 aaKnown RBP6.19□□□□□ -1.42
CAPN3-213ENST00000565173 RBPMSQ93062 196 aaKnown RBP6.19□□□□□ -1.42
CAPN3-213ENST00000565173 GPR146Q96CH1 333 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 NAA60Q9H7X0 242 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 ENY2Q9NPA8 101 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 CLEC5AQ9NY25 188 aa6.19□□□□□ -1.42
CAPN3-213ENST00000565173 DNAH11Q96DT5 4516 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 LINC00854A0A1B0GVQ3 168 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 HELTA6NFD8 242 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 BUB3O43684 328 aa6.18□□□□□ -1.42
CAPN3-213ENST00000565173 HNRNPCP07910 306 aaKnown RBP eCLIP6.18□□□□□ -1.42
CAPN3-213ENST00000565173 OR10J1P30954 320 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms