RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 GNG10P50151 68 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 RPL11P62913 178 aaKnown RBP2.8□□□□□ -1.96
CHD9-213ENST00000564845 LINC00518Q8N0U6 118 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 ZNF738Q8NE65 137 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 TMEM37Q8WXS4 190 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 C14orf79Q96F83 325 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 PGPEP1Q9NXJ5 209 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 CALYQ9NYX4 217 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 RAXQ9Y2V3 346 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 NKX2-6A6NCS4 301 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 NTN3O00634 580 aaPredicted RBP2.8□□□□□ -1.96
CHD9-213ENST00000564845 TDGF1P13385 188 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 GNB2P62879 340 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 MMDQ15546 238 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 OR10J3Q5JRS4 329 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 SP5Q6BEB4 398 aaPredicted RBP2.8□□□□□ -1.96
CHD9-213ENST00000564845 OR4D5Q8NGN0 318 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 DDB2Q92466 427 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 R3HDM4Q96D70 268 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 JKAMPQ9P055 326 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 IGHV3OR16-10A0A075B7F0 116 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 UBE2L5PA0A1B0GUS4 154 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 C9JCJ5 164 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 NDUFA4O00483 81 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 HOXA5P20719 270 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 WNT5AP41221 380 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 UBE2L3P68036 154 aaKnown RBP2.8□□□□□ -1.96
CHD9-213ENST00000564845 GUCA2BQ16661 112 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 STUMQ69YW2 141 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 NABP1Q96AH0 204 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 DKK4Q9UBT3 224 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 RNF115Q9Y4L5 304 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 WIPI2Q9Y4P8 454 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 TRAV26-1A0A087WT03 109 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 CRPP02741 224 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 PPIFP30405 207 aaKnown RBP2.8□□□□□ -1.96
CHD9-213ENST00000564845 SSTR5P35346 364 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 NHLH2Q02577 135 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 ZNF439Q8NDP4 499 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 DEFB104AQ8WTQ1 72 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 TMEM54Q969K7 222 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 ZNF2Q9BSG1 426 aaPredicted RBP2.8□□□□□ -1.96
CHD9-213ENST00000564845 SLC25A10Q9UBX3 287 aaPredicted RBP2.8□□□□□ -1.96
CHD9-213ENST00000564845 IGHV3OR16-8A0A075B7F1 116 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 MOSP00540 346 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 CEACAM6P40199 344 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 B3GALT5-AS1P59052 145 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 HBBP68871 147 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 C1orf100Q5SVJ3 147 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 MBNL2Q5VZF2 373 aaKnown RBP2.8□□□□□ -1.96
CHD9-213ENST00000564845 LYZL2Q7Z4W2 148 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 OR9G4Q8NGQ1 327 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 ISOC2Q96AB3 205 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 TMEM208Q9BTX3 173 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 APCP25054 2843 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 MALP21145 153 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 KLF9Q13886 244 aaPredicted RBP2.8□□□□□ -1.96
CHD9-213ENST00000564845 DIAPH2-AS1Q14236 149 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 PRSS3P2Q8NHM4 247 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 YPEL2Q96QA6 119 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 HIGD1AQ9Y241 93 aa2.8□□□□□ -1.96
CHD9-213ENST00000564845 PGPA6NDG6 321 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 F8WDY8 70 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 AP4M1O00189 453 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 NPPCP23582 126 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 ZNF90Q03938 601 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 GTF3C1Q12789 2109 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 LINC01560Q8TB33 94 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 RCC2Q9P258 522 aaKnown RBP2.79□□□□□ -1.96
CHD9-213ENST00000564845 PSG11Q9UQ72 335 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 TIMM23O14925 209 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 TRGC2P03986 189 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 NUP37Q8NFH4 326 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 QTRT1Q9BXR0 403 aaKnown RBP2.79□□□□□ -1.96
CHD9-213ENST00000564845 UNC79Q9P2D8 2635 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 CEACAM18A8MTB9 384 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 CD55P08174 381 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 RUNX1Q01196 453 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 POU2AF1Q16633 256 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 TBC1D26Q86UD7 250 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 PRR7Q8TB68 274 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 WDYHV1Q96HA8 205 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 LINC00477Q96M19 166 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 LINC00052Q96N35 136 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 PLSCR4Q9NRQ2 329 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 C11orf94C9JXX5 98 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 CST7O76096 145 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 GFRA1P56159 465 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 ARF6P62330 175 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 C9orf106Q8NAJ2 232 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 ZNF48Q96MX3 618 aaPredicted RBP2.79□□□□□ -1.96
CHD9-213ENST00000564845 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.79□□□□□ -1.96
CHD9-213ENST00000564845 IGKV1D-13A0A0B4J2D9 117 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 A0A0G2JRQ6 117 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 RBAKDNA6NC62 111 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 FCGR3BO75015 233 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 NPIPB7O75200 414 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 SRSF10O75494 262 aaKnown RBP2.79□□□□□ -1.96
CHD9-213ENST00000564845 NMBP08949 121 aa2.79□□□□□ -1.96
CHD9-213ENST00000564845 IGKV1-13P0DP09 117 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms